RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
HLA-DPA1-243ENST00000437811 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
HLA-DPA1-243ENST00000437811 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
HLA-DPA1-243ENST00000437811 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
HLA-DPA1-243ENST00000437811 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
HLA-DPA1-243ENST00000437811 VPS8Q8N3P4 1428 aa21.44■■□□□ 1.02
HLA-DPA1-243ENST00000437811 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
HLA-DPA1-243ENST00000437811 IQGAP2Q13576 1575 aa21.38■■□□□ 1.01
HLA-DPA1-243ENST00000437811 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
HLA-DPA1-243ENST00000437811 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
HLA-DPA1-243ENST00000437811 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
HLA-DPA1-243ENST00000437811 CEP170Q5SW79 1584 aa21.33■■□□□ 1.01
HLA-DPA1-243ENST00000437811 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1
HLA-DPA1-243ENST00000437811 NUP160Q12769 1436 aa21.32■■□□□ 1
HLA-DPA1-243ENST00000437811 CHD1O14646 1710 aa21.29■■□□□ 1
HLA-DPA1-243ENST00000437811 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
HLA-DPA1-243ENST00000437811 FHOD3Q2V2M9 1422 aa21.26■□□□□ 0.99
HLA-DPA1-243ENST00000437811 FBLN2P98095 1184 aa21.26■□□□□ 0.99
HLA-DPA1-243ENST00000437811 FOXD1Q16676 465 aa21.25■□□□□ 0.99
HLA-DPA1-243ENST00000437811 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
HLA-DPA1-243ENST00000437811 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
HLA-DPA1-243ENST00000437811 FMN1Q68DA7 1419 aa21.18■□□□□ 0.98
HLA-DPA1-243ENST00000437811 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
HLA-DPA1-243ENST00000437811 DISP1Q96F81 1524 aa21.16■□□□□ 0.98
HLA-DPA1-243ENST00000437811 FYCO1Q9BQS8 1478 aa21.14■□□□□ 0.98
HLA-DPA1-243ENST00000437811 APLP2Q06481 763 aa21.14■□□□□ 0.98
HLA-DPA1-243ENST00000437811 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.98
HLA-DPA1-243ENST00000437811 CASKIN1Q8WXD9 1431 aa21.13■□□□□ 0.97
HLA-DPA1-243ENST00000437811 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
HLA-DPA1-243ENST00000437811 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
HLA-DPA1-243ENST00000437811 CFAP43Q8NDM7 1665 aa21.09■□□□□ 0.97
HLA-DPA1-243ENST00000437811 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
HLA-DPA1-243ENST00000437811 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
HLA-DPA1-243ENST00000437811 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
HLA-DPA1-243ENST00000437811 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
HLA-DPA1-243ENST00000437811 CARMIL2Q6F5E8 1435 aa21.06■□□□□ 0.96
HLA-DPA1-243ENST00000437811 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
HLA-DPA1-243ENST00000437811 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
HLA-DPA1-243ENST00000437811 TTBK1Q5TCY1 1321 aaPredicted RBP21■□□□□ 0.95
HLA-DPA1-243ENST00000437811 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
HLA-DPA1-243ENST00000437811 PRG4Q92954 1404 aaPredicted RBP20.98■□□□□ 0.95
HLA-DPA1-243ENST00000437811 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
HLA-DPA1-243ENST00000437811 LRRC9Q6ZRR7 1453 aa20.96■□□□□ 0.95
HLA-DPA1-243ENST00000437811 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
HLA-DPA1-243ENST00000437811 ATP1B4Q9UN42 357 aaPredicted RBP20.95■□□□□ 0.94
HLA-DPA1-243ENST00000437811 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
HLA-DPA1-243ENST00000437811 EPRSP07814 1512 aaKnown RBP20.89■□□□□ 0.94
HLA-DPA1-243ENST00000437811 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
HLA-DPA1-243ENST00000437811 ABCA8O94911 1581 aa20.88■□□□□ 0.93
HLA-DPA1-243ENST00000437811 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
HLA-DPA1-243ENST00000437811 PLB1Q6P1J6 1458 aa20.86■□□□□ 0.93
HLA-DPA1-243ENST00000437811 EHBP1L1Q8N3D4 1523 aa20.85■□□□□ 0.93
HLA-DPA1-243ENST00000437811 CDK13Q14004 1512 aaKnown RBP20.84■□□□□ 0.93
HLA-DPA1-243ENST00000437811 PTPRGP23470 1445 aa20.83■□□□□ 0.93
HLA-DPA1-243ENST00000437811 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
HLA-DPA1-243ENST00000437811 MAGI3Q5TCQ9 1506 aa20.81■□□□□ 0.92
HLA-DPA1-243ENST00000437811 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
HLA-DPA1-243ENST00000437811 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.92
HLA-DPA1-243ENST00000437811 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
HLA-DPA1-243ENST00000437811 UACAQ9BZF9 1416 aa20.74■□□□□ 0.91
HLA-DPA1-243ENST00000437811 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
HLA-DPA1-243ENST00000437811 ARHGEF11O15085 1522 aa20.72■□□□□ 0.91
HLA-DPA1-243ENST00000437811 NCOA2Q15596 1464 aa20.72■□□□□ 0.91
HLA-DPA1-243ENST00000437811 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
HLA-DPA1-243ENST00000437811 ABCC2Q92887 1545 aa20.72■□□□□ 0.91
HLA-DPA1-243ENST00000437811 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
HLA-DPA1-243ENST00000437811 ATP10BO94823 1461 aa20.69■□□□□ 0.9
HLA-DPA1-243ENST00000437811 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
HLA-DPA1-243ENST00000437811 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
HLA-DPA1-243ENST00000437811 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
HLA-DPA1-243ENST00000437811 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
HLA-DPA1-243ENST00000437811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
HLA-DPA1-243ENST00000437811 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
HLA-DPA1-243ENST00000437811 MYOM3Q5VTT5 1437 aa20.63■□□□□ 0.89
HLA-DPA1-243ENST00000437811 FGD6Q6ZV73 1430 aa20.63■□□□□ 0.89
HLA-DPA1-243ENST00000437811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.58■□□□□ 0.89
HLA-DPA1-243ENST00000437811 KIF14Q15058 1648 aa20.58■□□□□ 0.89
HLA-DPA1-243ENST00000437811 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.88
HLA-DPA1-243ENST00000437811 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.88
HLA-DPA1-243ENST00000437811 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
HLA-DPA1-243ENST00000437811 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
HLA-DPA1-243ENST00000437811 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
HLA-DPA1-243ENST00000437811 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
HLA-DPA1-243ENST00000437811 ITSN2Q9NZM3 1697 aa20.53■□□□□ 0.88
HLA-DPA1-243ENST00000437811 ABCC10Q5T3U5 1492 aa20.51■□□□□ 0.87
HLA-DPA1-243ENST00000437811 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
HLA-DPA1-243ENST00000437811 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
HLA-DPA1-243ENST00000437811 CDC42BPAQ5VT25 1732 aa20.46■□□□□ 0.87
HLA-DPA1-243ENST00000437811 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
HLA-DPA1-243ENST00000437811 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
HLA-DPA1-243ENST00000437811 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
HLA-DPA1-243ENST00000437811 ITGAEP38570 1179 aa20.42■□□□□ 0.86
HLA-DPA1-243ENST00000437811 ADRA2BP18089 450 aa20.41■□□□□ 0.86
HLA-DPA1-243ENST00000437811 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
HLA-DPA1-243ENST00000437811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
HLA-DPA1-243ENST00000437811 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
HLA-DPA1-243ENST00000437811 PREX2Q70Z35 1606 aa20.39■□□□□ 0.86
HLA-DPA1-243ENST00000437811 HRCP23327 699 aa20.39■□□□□ 0.85
HLA-DPA1-243ENST00000437811 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
HLA-DPA1-243ENST00000437811 WDR7Q9Y4E6 1490 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms