RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
SNHG3-202ENST00000437681 FBLN2P98095 1184 aa19.05■□□□□ 0.64
SNHG3-202ENST00000437681 UGGT2Q9NYU1 1516 aa19.04■□□□□ 0.64
SNHG3-202ENST00000437681 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
SNHG3-202ENST00000437681 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
SNHG3-202ENST00000437681 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
SNHG3-202ENST00000437681 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
SNHG3-202ENST00000437681 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
SNHG3-202ENST00000437681 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SNHG3-202ENST00000437681 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
SNHG3-202ENST00000437681 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
SNHG3-202ENST00000437681 SAMD9Q5K651 1589 aa18.89■□□□□ 0.62
SNHG3-202ENST00000437681 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
SNHG3-202ENST00000437681 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
SNHG3-202ENST00000437681 ARAP1Q96P48 1450 aa18.86■□□□□ 0.61
SNHG3-202ENST00000437681 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
SNHG3-202ENST00000437681 TNIKQ9UKE5 1360 aa18.82■□□□□ 0.6
SNHG3-202ENST00000437681 UHRF1BP1LA0JNW5 1464 aa18.8■□□□□ 0.6
SNHG3-202ENST00000437681 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
SNHG3-202ENST00000437681 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
SNHG3-202ENST00000437681 PTPRGP23470 1445 aa18.71■□□□□ 0.59
SNHG3-202ENST00000437681 ABCA8O94911 1581 aa18.69■□□□□ 0.58
SNHG3-202ENST00000437681 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
SNHG3-202ENST00000437681 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
SNHG3-202ENST00000437681 ADCY10Q96PN6 1610 aa18.65■□□□□ 0.58
SNHG3-202ENST00000437681 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
SNHG3-202ENST00000437681 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
SNHG3-202ENST00000437681 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
SNHG3-202ENST00000437681 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
SNHG3-202ENST00000437681 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
SNHG3-202ENST00000437681 RAPGEF6Q8TEU7 1601 aa18.61■□□□□ 0.57
SNHG3-202ENST00000437681 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
SNHG3-202ENST00000437681 CLIP1P30622 1438 aa18.56■□□□□ 0.56
SNHG3-202ENST00000437681 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
SNHG3-202ENST00000437681 ZCCHC11Q5TAX3 1644 aaKnown RBP18.53■□□□□ 0.56
SNHG3-202ENST00000437681 FHOD3Q2V2M9 1422 aa18.51■□□□□ 0.55
SNHG3-202ENST00000437681 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
SNHG3-202ENST00000437681 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
SNHG3-202ENST00000437681 GLI2P10070 1586 aa18.5■□□□□ 0.55
SNHG3-202ENST00000437681 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
SNHG3-202ENST00000437681 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
SNHG3-202ENST00000437681 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNHG3-202ENST00000437681 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
SNHG3-202ENST00000437681 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.55
SNHG3-202ENST00000437681 ATP10BO94823 1461 aa18.42■□□□□ 0.54
SNHG3-202ENST00000437681 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
SNHG3-202ENST00000437681 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
SNHG3-202ENST00000437681 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
SNHG3-202ENST00000437681 DIP2BQ9P265 1576 aa18.4■□□□□ 0.54
SNHG3-202ENST00000437681 WDR7Q9Y4E6 1490 aa18.4■□□□□ 0.54
SNHG3-202ENST00000437681 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.53
SNHG3-202ENST00000437681 EPRSP07814 1512 aaKnown RBP18.38■□□□□ 0.53
SNHG3-202ENST00000437681 ASXL2Q76L83 1435 aa18.38■□□□□ 0.53
SNHG3-202ENST00000437681 CFAP43Q8NDM7 1665 aa18.37■□□□□ 0.53
SNHG3-202ENST00000437681 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
SNHG3-202ENST00000437681 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
SNHG3-202ENST00000437681 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
SNHG3-202ENST00000437681 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
SNHG3-202ENST00000437681 ABCA9Q8IUA7 1624 aa18.32■□□□□ 0.52
SNHG3-202ENST00000437681 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
SNHG3-202ENST00000437681 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
SNHG3-202ENST00000437681 ARAP3Q8WWN8 1544 aa18.29■□□□□ 0.52
SNHG3-202ENST00000437681 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.51
SNHG3-202ENST00000437681 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
SNHG3-202ENST00000437681 PHLDB1Q86UU1 1377 aa18.25■□□□□ 0.51
SNHG3-202ENST00000437681 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
SNHG3-202ENST00000437681 KIF14Q15058 1648 aa18.25■□□□□ 0.51
SNHG3-202ENST00000437681 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
SNHG3-202ENST00000437681 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
SNHG3-202ENST00000437681 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
SNHG3-202ENST00000437681 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SNHG3-202ENST00000437681 TIAM1Q13009 1591 aa18.23■□□□□ 0.51
SNHG3-202ENST00000437681 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
SNHG3-202ENST00000437681 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
SNHG3-202ENST00000437681 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
SNHG3-202ENST00000437681 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
SNHG3-202ENST00000437681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNHG3-202ENST00000437681 MYO5CQ9NQX4 1742 aa18.17■□□□□ 0.5
SNHG3-202ENST00000437681 NEO1Q92859 1461 aa18.16■□□□□ 0.5
SNHG3-202ENST00000437681 SUPT6HQ7KZ85 1726 aaKnown RBP18.14■□□□□ 0.5
SNHG3-202ENST00000437681 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
SNHG3-202ENST00000437681 CD109Q6YHK3 1445 aa18.13■□□□□ 0.49
SNHG3-202ENST00000437681 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
SNHG3-202ENST00000437681 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
SNHG3-202ENST00000437681 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
SNHG3-202ENST00000437681 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
SNHG3-202ENST00000437681 PLCH2O75038 1416 aa18.1■□□□□ 0.49
SNHG3-202ENST00000437681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.49
SNHG3-202ENST00000437681 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.49
SNHG3-202ENST00000437681 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.49
SNHG3-202ENST00000437681 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
SNHG3-202ENST00000437681 MTUS2Q5JR59 1369 aa18.07■□□□□ 0.48
SNHG3-202ENST00000437681 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
SNHG3-202ENST00000437681 PLEKHH2Q8IVE3 1493 aa18.04■□□□□ 0.48
SNHG3-202ENST00000437681 TSPOAP1O95153 1857 aa18.04■□□□□ 0.48
SNHG3-202ENST00000437681 ATP1B4Q9UN42 357 aaPredicted RBP18.03■□□□□ 0.48
SNHG3-202ENST00000437681 APLP2Q06481 763 aa18.01■□□□□ 0.47
SNHG3-202ENST00000437681 KDM6BO15054 1643 aa18.01■□□□□ 0.47
SNHG3-202ENST00000437681 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
SNHG3-202ENST00000437681 FANCAO15360 1455 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms