RNA–Protein interactions for RNA: ENST00000436587.6

C1GALT1-205, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C1GALT1, Length 6,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-205ENST00000436587 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
C1GALT1-205ENST00000436587 KANK4Q5T7N3 995 aaPredicted RBP17.55■□□□□ 0.4
C1GALT1-205ENST00000436587 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
C1GALT1-205ENST00000436587 MIER1Q8N108 512 aa17.54■□□□□ 0.4
C1GALT1-205ENST00000436587 BCANQ96GW7 911 aa17.54■□□□□ 0.4
C1GALT1-205ENST00000436587 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
C1GALT1-205ENST00000436587 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
C1GALT1-205ENST00000436587 FMN1Q68DA7 1419 aa17.5■□□□□ 0.39
C1GALT1-205ENST00000436587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■□□□□ 9.2
C1GALT1-205ENST00000436587 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
C1GALT1-205ENST00000436587 DAXXQ9UER7 740 aaPredicted RBP17.48■□□□□ 0.39
C1GALT1-205ENST00000436587 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
C1GALT1-205ENST00000436587 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
C1GALT1-205ENST00000436587 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
C1GALT1-205ENST00000436587 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
C1GALT1-205ENST00000436587 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
C1GALT1-205ENST00000436587 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.381e-7■□□□□ 8.3
C1GALT1-205ENST00000436587 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
C1GALT1-205ENST00000436587 KDM2AQ9Y2K7 1162 aa17.4■□□□□ 0.38
C1GALT1-205ENST00000436587 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
C1GALT1-205ENST00000436587 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
C1GALT1-205ENST00000436587 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
C1GALT1-205ENST00000436587 IGF1RP08069 1367 aa17.36■□□□□ 0.37
C1GALT1-205ENST00000436587 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
C1GALT1-205ENST00000436587 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
C1GALT1-205ENST00000436587 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
C1GALT1-205ENST00000436587 CFTRP13569 1480 aa17.35■□□□□ 0.37
C1GALT1-205ENST00000436587 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
C1GALT1-205ENST00000436587 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
C1GALT1-205ENST00000436587 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
C1GALT1-205ENST00000436587 FKBP8Q14318 412 aa17.33■□□□□ 0.36
C1GALT1-205ENST00000436587 KIF21BO75037 1637 aa17.32■□□□□ 0.36
C1GALT1-205ENST00000436587 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
C1GALT1-205ENST00000436587 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
C1GALT1-205ENST00000436587 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
C1GALT1-205ENST00000436587 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
C1GALT1-205ENST00000436587 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.35
C1GALT1-205ENST00000436587 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
C1GALT1-205ENST00000436587 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
C1GALT1-205ENST00000436587 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
C1GALT1-205ENST00000436587 NEFMP07197 916 aa17.24■□□□□ 0.35
C1GALT1-205ENST00000436587 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
C1GALT1-205ENST00000436587 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
C1GALT1-205ENST00000436587 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
C1GALT1-205ENST00000436587 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
C1GALT1-205ENST00000436587 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
C1GALT1-205ENST00000436587 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
C1GALT1-205ENST00000436587 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
C1GALT1-205ENST00000436587 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
C1GALT1-205ENST00000436587 CUX1P39880 1505 aa17.16■□□□□ 0.34
C1GALT1-205ENST00000436587 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
C1GALT1-205ENST00000436587 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
C1GALT1-205ENST00000436587 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
C1GALT1-205ENST00000436587 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
C1GALT1-205ENST00000436587 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
C1GALT1-205ENST00000436587 ANKRD30AQ9BXX3 1397 aa17.11■□□□□ 0.33
C1GALT1-205ENST00000436587 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
C1GALT1-205ENST00000436587 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
C1GALT1-205ENST00000436587 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
C1GALT1-205ENST00000436587 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
C1GALT1-205ENST00000436587 PKD2Q13563 968 aa17.09■□□□□ 0.33
C1GALT1-205ENST00000436587 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
C1GALT1-205ENST00000436587 NESP48681 1621 aa17.07■□□□□ 0.32
C1GALT1-205ENST00000436587 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
C1GALT1-205ENST00000436587 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 FOXD1Q16676 465 aa17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
C1GALT1-205ENST00000436587 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
C1GALT1-205ENST00000436587 KANK1Q14678 1352 aa17.04■□□□□ 0.32
C1GALT1-205ENST00000436587 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
C1GALT1-205ENST00000436587 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.327e-7■■■□□ 17.3
C1GALT1-205ENST00000436587 NUP155O75694 1391 aa17.03■□□□□ 0.32
C1GALT1-205ENST00000436587 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
C1GALT1-205ENST00000436587 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.31
C1GALT1-205ENST00000436587 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.31
C1GALT1-205ENST00000436587 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.31
C1GALT1-205ENST00000436587 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
C1GALT1-205ENST00000436587 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
C1GALT1-205ENST00000436587 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
C1GALT1-205ENST00000436587 GRIN2BQ13224 1484 aa17■□□□□ 0.31
C1GALT1-205ENST00000436587 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
C1GALT1-205ENST00000436587 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
C1GALT1-205ENST00000436587 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
C1GALT1-205ENST00000436587 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
C1GALT1-205ENST00000436587 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
C1GALT1-205ENST00000436587 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
C1GALT1-205ENST00000436587 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
C1GALT1-205ENST00000436587 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
C1GALT1-205ENST00000436587 PTPRGP23470 1445 aa16.96■□□□□ 0.31
C1GALT1-205ENST00000436587 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.315e-7■■■■□ 25.8
C1GALT1-205ENST00000436587 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
C1GALT1-205ENST00000436587 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
C1GALT1-205ENST00000436587 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
C1GALT1-205ENST00000436587 TMF1P82094 1093 aa16.94■□□□□ 0.3
C1GALT1-205ENST00000436587 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
C1GALT1-205ENST00000436587 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
C1GALT1-205ENST00000436587 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms