RNA–Protein interactions for RNA: ENST00000435777.2

COL22A1-203, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene COL22A1, Length 4,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-203ENST00000435777 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
COL22A1-203ENST00000435777 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
COL22A1-203ENST00000435777 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
COL22A1-203ENST00000435777 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
COL22A1-203ENST00000435777 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
COL22A1-203ENST00000435777 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
COL22A1-203ENST00000435777 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
COL22A1-203ENST00000435777 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.35
COL22A1-203ENST00000435777 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
COL22A1-203ENST00000435777 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
COL22A1-203ENST00000435777 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
COL22A1-203ENST00000435777 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
COL22A1-203ENST00000435777 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
COL22A1-203ENST00000435777 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
COL22A1-203ENST00000435777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL22A1-203ENST00000435777 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
COL22A1-203ENST00000435777 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
COL22A1-203ENST00000435777 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
COL22A1-203ENST00000435777 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
COL22A1-203ENST00000435777 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
COL22A1-203ENST00000435777 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
COL22A1-203ENST00000435777 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
COL22A1-203ENST00000435777 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
COL22A1-203ENST00000435777 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
COL22A1-203ENST00000435777 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
COL22A1-203ENST00000435777 KIF21BO75037 1637 aa17.13■□□□□ 0.33
COL22A1-203ENST00000435777 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
COL22A1-203ENST00000435777 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
COL22A1-203ENST00000435777 FOXD1Q16676 465 aa17.1■□□□□ 0.33
COL22A1-203ENST00000435777 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
COL22A1-203ENST00000435777 IGF1RP08069 1367 aa17.1■□□□□ 0.33
COL22A1-203ENST00000435777 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
COL22A1-203ENST00000435777 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
COL22A1-203ENST00000435777 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
COL22A1-203ENST00000435777 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
COL22A1-203ENST00000435777 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
COL22A1-203ENST00000435777 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
COL22A1-203ENST00000435777 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
COL22A1-203ENST00000435777 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
COL22A1-203ENST00000435777 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
COL22A1-203ENST00000435777 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
COL22A1-203ENST00000435777 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
COL22A1-203ENST00000435777 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
COL22A1-203ENST00000435777 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
COL22A1-203ENST00000435777 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
COL22A1-203ENST00000435777 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
COL22A1-203ENST00000435777 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
COL22A1-203ENST00000435777 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
COL22A1-203ENST00000435777 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
COL22A1-203ENST00000435777 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
COL22A1-203ENST00000435777 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
COL22A1-203ENST00000435777 PKD2Q13563 968 aa16.9■□□□□ 0.3
COL22A1-203ENST00000435777 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
COL22A1-203ENST00000435777 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
COL22A1-203ENST00000435777 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL22A1-203ENST00000435777 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.3
COL22A1-203ENST00000435777 NBR1Q14596 966 aa16.89■□□□□ 0.29
COL22A1-203ENST00000435777 DCAF11Q8TEB1 546 aa16.89■□□□□ 0.29
COL22A1-203ENST00000435777 PPP4R2Q9NY27 417 aa16.89■□□□□ 0.29
COL22A1-203ENST00000435777 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
COL22A1-203ENST00000435777 CFTRP13569 1480 aa16.88■□□□□ 0.29
COL22A1-203ENST00000435777 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
COL22A1-203ENST00000435777 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
COL22A1-203ENST00000435777 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
COL22A1-203ENST00000435777 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
COL22A1-203ENST00000435777 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
COL22A1-203ENST00000435777 CUX1P39880 1505 aa16.85■□□□□ 0.29
COL22A1-203ENST00000435777 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
COL22A1-203ENST00000435777 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
COL22A1-203ENST00000435777 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
COL22A1-203ENST00000435777 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
COL22A1-203ENST00000435777 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL22A1-203ENST00000435777 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
COL22A1-203ENST00000435777 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
COL22A1-203ENST00000435777 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
COL22A1-203ENST00000435777 NUP155O75694 1391 aa16.77■□□□□ 0.28
COL22A1-203ENST00000435777 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.77■□□□□ 0.27
COL22A1-203ENST00000435777 KNSTRNQ9Y448 316 aa16.76■□□□□ 0.27
COL22A1-203ENST00000435777 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
COL22A1-203ENST00000435777 NEFMP07197 916 aa16.76■□□□□ 0.27
COL22A1-203ENST00000435777 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
COL22A1-203ENST00000435777 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
COL22A1-203ENST00000435777 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
COL22A1-203ENST00000435777 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
COL22A1-203ENST00000435777 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
COL22A1-203ENST00000435777 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.279e-6■■■■□ 19.4
COL22A1-203ENST00000435777 MYOM3Q5VTT5 1437 aa16.71■□□□□ 0.26
COL22A1-203ENST00000435777 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
COL22A1-203ENST00000435777 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
COL22A1-203ENST00000435777 NESP48681 1621 aa16.69■□□□□ 0.26
COL22A1-203ENST00000435777 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
COL22A1-203ENST00000435777 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
COL22A1-203ENST00000435777 CDCA8Q53HL2 280 aa16.67■□□□□ 0.26
COL22A1-203ENST00000435777 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
COL22A1-203ENST00000435777 TMF1P82094 1093 aa16.66■□□□□ 0.26
COL22A1-203ENST00000435777 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
COL22A1-203ENST00000435777 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
COL22A1-203ENST00000435777 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL22A1-203ENST00000435777 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
COL22A1-203ENST00000435777 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms