RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
CLDN4-203ENST00000435050 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
CLDN4-203ENST00000435050 CHIC2Q9UKJ5 165 aa17.67■□□□□ 0.42
CLDN4-203ENST00000435050 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
CLDN4-203ENST00000435050 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.41
CLDN4-203ENST00000435050 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
CLDN4-203ENST00000435050 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLDN4-203ENST00000435050 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
CLDN4-203ENST00000435050 ZNF777Q9ULD5 760 aaPredicted RBP17.59■□□□□ 0.41
CLDN4-203ENST00000435050 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
CLDN4-203ENST00000435050 RRP7BPQ9NSQ0 103 aa17.55■□□□□ 0.4
CLDN4-203ENST00000435050 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
CLDN4-203ENST00000435050 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
CLDN4-203ENST00000435050 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
CLDN4-203ENST00000435050 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
CLDN4-203ENST00000435050 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
CLDN4-203ENST00000435050 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
CLDN4-203ENST00000435050 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
CLDN4-203ENST00000435050 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
CLDN4-203ENST00000435050 MIER1Q8N108 512 aa17.47■□□□□ 0.39
CLDN4-203ENST00000435050 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
CLDN4-203ENST00000435050 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
CLDN4-203ENST00000435050 LRRC9Q6ZRR7 1453 aa17.41■□□□□ 0.38
CLDN4-203ENST00000435050 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
CLDN4-203ENST00000435050 SETD5Q9C0A6 1442 aa17.39■□□□□ 0.38
CLDN4-203ENST00000435050 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
CLDN4-203ENST00000435050 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
CLDN4-203ENST00000435050 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
CLDN4-203ENST00000435050 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
CLDN4-203ENST00000435050 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
CLDN4-203ENST00000435050 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
CLDN4-203ENST00000435050 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
CLDN4-203ENST00000435050 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
CLDN4-203ENST00000435050 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
CLDN4-203ENST00000435050 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
CLDN4-203ENST00000435050 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
CLDN4-203ENST00000435050 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.37
CLDN4-203ENST00000435050 TIAM1Q13009 1591 aa17.33■□□□□ 0.36
CLDN4-203ENST00000435050 CASKIN1Q8WXD9 1431 aa17.33■□□□□ 0.36
CLDN4-203ENST00000435050 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
CLDN4-203ENST00000435050 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
CLDN4-203ENST00000435050 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
CLDN4-203ENST00000435050 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
CLDN4-203ENST00000435050 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
CLDN4-203ENST00000435050 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
CLDN4-203ENST00000435050 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
CLDN4-203ENST00000435050 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
CLDN4-203ENST00000435050 FYCO1Q9BQS8 1478 aa17.26■□□□□ 0.35
CLDN4-203ENST00000435050 FOXD1Q16676 465 aa17.26■□□□□ 0.35
CLDN4-203ENST00000435050 MYT1Q01538 1121 aa17.26■□□□□ 0.35
CLDN4-203ENST00000435050 CUL7Q14999 1698 aa17.26■□□□□ 0.35
CLDN4-203ENST00000435050 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
CLDN4-203ENST00000435050 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
CLDN4-203ENST00000435050 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
CLDN4-203ENST00000435050 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
CLDN4-203ENST00000435050 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
CLDN4-203ENST00000435050 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-203ENST00000435050 NCOA2Q15596 1464 aa17.2■□□□□ 0.34
CLDN4-203ENST00000435050 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
CLDN4-203ENST00000435050 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
CLDN4-203ENST00000435050 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
CLDN4-203ENST00000435050 MYOM3Q5VTT5 1437 aa17.16■□□□□ 0.34
CLDN4-203ENST00000435050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLDN4-203ENST00000435050 ANP32CO43423 234 aa17.14■□□□□ 0.34
CLDN4-203ENST00000435050 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
CLDN4-203ENST00000435050 IQGAP2Q13576 1575 aa17.12■□□□□ 0.33
CLDN4-203ENST00000435050 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
CLDN4-203ENST00000435050 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
CLDN4-203ENST00000435050 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
CLDN4-203ENST00000435050 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
CLDN4-203ENST00000435050 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
CLDN4-203ENST00000435050 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
CLDN4-203ENST00000435050 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
CLDN4-203ENST00000435050 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
CLDN4-203ENST00000435050 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
CLDN4-203ENST00000435050 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
CLDN4-203ENST00000435050 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLDN4-203ENST00000435050 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
CLDN4-203ENST00000435050 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
CLDN4-203ENST00000435050 PTPRGP23470 1445 aa17.03■□□□□ 0.32
CLDN4-203ENST00000435050 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.31
CLDN4-203ENST00000435050 EHBP1L1Q8N3D4 1523 aa17.01■□□□□ 0.31
CLDN4-203ENST00000435050 ADAMTS12P58397 1594 aa17■□□□□ 0.31
CLDN4-203ENST00000435050 PTPRKQ15262 1439 aa17■□□□□ 0.31
CLDN4-203ENST00000435050 EIF4G2P78344 907 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLDN4-203ENST00000435050 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
CLDN4-203ENST00000435050 L3MBTL2Q969R5 705 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 PKD2Q13563 968 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 BCANQ96GW7 911 aa16.98■□□□□ 0.31
CLDN4-203ENST00000435050 NEFLP07196 543 aa16.96■□□□□ 0.31
CLDN4-203ENST00000435050 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
CLDN4-203ENST00000435050 PBRM1Q86U86 1689 aa16.96■□□□□ 0.3
CLDN4-203ENST00000435050 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
CLDN4-203ENST00000435050 WDR62O43379 1518 aa16.95■□□□□ 0.3
CLDN4-203ENST00000435050 NAIPQ13075 1403 aa16.95■□□□□ 0.3
CLDN4-203ENST00000435050 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
CLDN4-203ENST00000435050 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms