RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
PCOTH-203ENST00000435039 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
PCOTH-203ENST00000435039 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
PCOTH-203ENST00000435039 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
PCOTH-203ENST00000435039 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
PCOTH-203ENST00000435039 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
PCOTH-203ENST00000435039 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
PCOTH-203ENST00000435039 CEP162Q5TB80 1403 aa18.28■□□□□ 0.52
PCOTH-203ENST00000435039 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
PCOTH-203ENST00000435039 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
PCOTH-203ENST00000435039 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
PCOTH-203ENST00000435039 CLIP1P30622 1438 aa18.18■□□□□ 0.5
PCOTH-203ENST00000435039 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
PCOTH-203ENST00000435039 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
PCOTH-203ENST00000435039 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
PCOTH-203ENST00000435039 NUP160Q12769 1436 aa18.15■□□□□ 0.5
PCOTH-203ENST00000435039 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
PCOTH-203ENST00000435039 KIAA0586Q9BVV6 1533 aa18.11■□□□□ 0.49
PCOTH-203ENST00000435039 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
PCOTH-203ENST00000435039 UGGT2Q9NYU1 1516 aa18.08■□□□□ 0.48
PCOTH-203ENST00000435039 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
PCOTH-203ENST00000435039 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
PCOTH-203ENST00000435039 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
PCOTH-203ENST00000435039 KIAA0556O60303 1618 aa18■□□□□ 0.47
PCOTH-203ENST00000435039 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
PCOTH-203ENST00000435039 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
PCOTH-203ENST00000435039 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
PCOTH-203ENST00000435039 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
PCOTH-203ENST00000435039 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
PCOTH-203ENST00000435039 FYCO1Q9BQS8 1478 aa17.89■□□□□ 0.45
PCOTH-203ENST00000435039 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
PCOTH-203ENST00000435039 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
PCOTH-203ENST00000435039 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
PCOTH-203ENST00000435039 KIF13AQ9H1H9 1805 aa17.85■□□□□ 0.45
PCOTH-203ENST00000435039 CASKIN1Q8WXD9 1431 aa17.84■□□□□ 0.45
PCOTH-203ENST00000435039 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
PCOTH-203ENST00000435039 HECW1Q76N89 1606 aa17.83■□□□□ 0.44
PCOTH-203ENST00000435039 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
PCOTH-203ENST00000435039 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
PCOTH-203ENST00000435039 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
PCOTH-203ENST00000435039 RAPGEF6Q8TEU7 1601 aa17.78■□□□□ 0.44
PCOTH-203ENST00000435039 LRRIQ1Q96JM4 1722 aa17.76■□□□□ 0.43
PCOTH-203ENST00000435039 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
PCOTH-203ENST00000435039 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
PCOTH-203ENST00000435039 ABCA8O94911 1581 aa17.74■□□□□ 0.43
PCOTH-203ENST00000435039 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
PCOTH-203ENST00000435039 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
PCOTH-203ENST00000435039 APLP2Q06481 763 aa17.69■□□□□ 0.42
PCOTH-203ENST00000435039 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
PCOTH-203ENST00000435039 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
PCOTH-203ENST00000435039 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
PCOTH-203ENST00000435039 PLB1Q6P1J6 1458 aa17.67■□□□□ 0.42
PCOTH-203ENST00000435039 DIP2BQ9P265 1576 aa17.66■□□□□ 0.42
PCOTH-203ENST00000435039 PTPRGP23470 1445 aa17.66■□□□□ 0.42
PCOTH-203ENST00000435039 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
PCOTH-203ENST00000435039 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
PCOTH-203ENST00000435039 ABCC2Q92887 1545 aa17.64■□□□□ 0.41
PCOTH-203ENST00000435039 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
PCOTH-203ENST00000435039 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
PCOTH-203ENST00000435039 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
PCOTH-203ENST00000435039 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
PCOTH-203ENST00000435039 UHRF1BP1LA0JNW5 1464 aa17.61■□□□□ 0.41
PCOTH-203ENST00000435039 TSPOAP1O95153 1857 aa17.58■□□□□ 0.4
PCOTH-203ENST00000435039 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
PCOTH-203ENST00000435039 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
PCOTH-203ENST00000435039 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
PCOTH-203ENST00000435039 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
PCOTH-203ENST00000435039 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
PCOTH-203ENST00000435039 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
PCOTH-203ENST00000435039 KDM6BO15054 1643 aa17.53■□□□□ 0.4
PCOTH-203ENST00000435039 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.4
PCOTH-203ENST00000435039 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
PCOTH-203ENST00000435039 ATP10BO94823 1461 aa17.51■□□□□ 0.39
PCOTH-203ENST00000435039 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
PCOTH-203ENST00000435039 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
PCOTH-203ENST00000435039 TRIM26Q12899 539 aaPredicted RBP17.49■□□□□ 0.39
PCOTH-203ENST00000435039 KIF14Q15058 1648 aa17.47■□□□□ 0.39
PCOTH-203ENST00000435039 NCOA2Q15596 1464 aa17.47■□□□□ 0.39
PCOTH-203ENST00000435039 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
PCOTH-203ENST00000435039 ASXL2Q76L83 1435 aa17.46■□□□□ 0.39
PCOTH-203ENST00000435039 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
PCOTH-203ENST00000435039 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
PCOTH-203ENST00000435039 ITSN2Q9NZM3 1697 aa17.43■□□□□ 0.38
PCOTH-203ENST00000435039 GLI2P10070 1586 aa17.43■□□□□ 0.38
PCOTH-203ENST00000435039 PHLDB1Q86UU1 1377 aa17.42■□□□□ 0.38
PCOTH-203ENST00000435039 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
PCOTH-203ENST00000435039 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
PCOTH-203ENST00000435039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
PCOTH-203ENST00000435039 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
PCOTH-203ENST00000435039 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
PCOTH-203ENST00000435039 KDM4FA0A1W2PPD8 638 aa17.37■□□□□ 0.37
PCOTH-203ENST00000435039 CCNB3Q8WWL7 1395 aa17.37■□□□□ 0.37
PCOTH-203ENST00000435039 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
PCOTH-203ENST00000435039 WDR7Q9Y4E6 1490 aa17.35■□□□□ 0.37
PCOTH-203ENST00000435039 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
PCOTH-203ENST00000435039 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
PCOTH-203ENST00000435039 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
PCOTH-203ENST00000435039 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
PCOTH-203ENST00000435039 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
PCOTH-203ENST00000435039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms