RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
NUP50-210ENST00000434760 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
NUP50-210ENST00000434760 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
NUP50-210ENST00000434760 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
NUP50-210ENST00000434760 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
NUP50-210ENST00000434760 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
NUP50-210ENST00000434760 KIF13AQ9H1H9 1805 aa27.22■■□□□ 1.95
NUP50-210ENST00000434760 RAPGEF2Q9Y4G8 1499 aa27.16■■□□□ 1.94
NUP50-210ENST00000434760 MAPKBP1O60336 1514 aa27.13■■□□□ 1.93
NUP50-210ENST00000434760 CTTNBP2Q8WZ74 1663 aa27.13■■□□□ 1.93
NUP50-210ENST00000434760 DISP1Q96F81 1524 aa27.08■■□□□ 1.93
NUP50-210ENST00000434760 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
NUP50-210ENST00000434760 DIP2BQ9P265 1576 aa27.04■■□□□ 1.92
NUP50-210ENST00000434760 KIAA0556O60303 1618 aa27.03■■□□□ 1.92
NUP50-210ENST00000434760 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
NUP50-210ENST00000434760 CARMIL2Q6F5E8 1435 aa27.02■■□□□ 1.92
NUP50-210ENST00000434760 TNIKQ9UKE5 1360 aa26.99■■□□□ 1.91
NUP50-210ENST00000434760 ABCC10Q5T3U5 1492 aa26.99■■□□□ 1.91
NUP50-210ENST00000434760 PTPRGP23470 1445 aa26.98■■□□□ 1.91
NUP50-210ENST00000434760 ABCC2Q92887 1545 aa26.93■■□□□ 1.9
NUP50-210ENST00000434760 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
NUP50-210ENST00000434760 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
NUP50-210ENST00000434760 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
NUP50-210ENST00000434760 ZCCHC11Q5TAX3 1644 aaKnown RBP26.82■■□□□ 1.88
NUP50-210ENST00000434760 KDM5BQ9UGL1 1544 aa26.8■■□□□ 1.88
NUP50-210ENST00000434760 GOLGA3Q08378 1498 aa26.78■■□□□ 1.88
NUP50-210ENST00000434760 TSPOAP1O95153 1857 aa26.78■■□□□ 1.88
NUP50-210ENST00000434760 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
NUP50-210ENST00000434760 EEA1Q15075 1411 aa26.76■■□□□ 1.87
NUP50-210ENST00000434760 ASXL2Q76L83 1435 aa26.76■■□□□ 1.87
NUP50-210ENST00000434760 PPRC1Q5VV67 1664 aaKnown RBP26.76■■□□□ 1.87
NUP50-210ENST00000434760 FAM69CQ0P6D2 419 aa26.75■■□□□ 1.87
NUP50-210ENST00000434760 ABCA8O94911 1581 aa26.75■■□□□ 1.87
NUP50-210ENST00000434760 GLI2P10070 1586 aa26.75■■□□□ 1.87
NUP50-210ENST00000434760 PLB1Q6P1J6 1458 aa26.73■■□□□ 1.87
NUP50-210ENST00000434760 SAMD9Q5K651 1589 aa26.72■■□□□ 1.87
NUP50-210ENST00000434760 MAP3K4Q9Y6R4 1608 aa26.68■■□□□ 1.86
NUP50-210ENST00000434760 KDM6BO15054 1643 aa26.67■■□□□ 1.86
NUP50-210ENST00000434760 KIF21BO75037 1637 aa26.66■■□□□ 1.86
NUP50-210ENST00000434760 CSRNP3Q8WYN3 585 aa26.66■■□□□ 1.86
NUP50-210ENST00000434760 EPRSP07814 1512 aaKnown RBP26.64■■□□□ 1.85
NUP50-210ENST00000434760 WDR7Q9Y4E6 1490 aa26.59■■□□□ 1.85
NUP50-210ENST00000434760 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
NUP50-210ENST00000434760 CFAP43Q8NDM7 1665 aa26.5■■□□□ 1.83
NUP50-210ENST00000434760 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.83
NUP50-210ENST00000434760 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
NUP50-210ENST00000434760 TEX14Q8IWB6 1497 aa26.42■■□□□ 1.82
NUP50-210ENST00000434760 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
NUP50-210ENST00000434760 ATP10BO94823 1461 aa26.41■■□□□ 1.82
NUP50-210ENST00000434760 FHOD3Q2V2M9 1422 aa26.4■■□□□ 1.82
NUP50-210ENST00000434760 COL17A1Q9UMD9 1497 aaPredicted RBP26.39■■□□□ 1.82
NUP50-210ENST00000434760 P3H3Q8IVL6 736 aa26.39■■□□□ 1.82
NUP50-210ENST00000434760 NUP153P49790 1475 aaKnown RBP26.38■■□□□ 1.81
NUP50-210ENST00000434760 MAGI3Q5TCQ9 1506 aa26.37■■□□□ 1.81
NUP50-210ENST00000434760 ABCA9Q8IUA7 1624 aa26.35■■□□□ 1.81
NUP50-210ENST00000434760 CD109Q6YHK3 1445 aa26.3■■□□□ 1.8
NUP50-210ENST00000434760 ARID3CA6NKF2 412 aa26.26■■□□□ 1.79
NUP50-210ENST00000434760 AEBP2Q6ZN18 517 aaPredicted RBP26.23■■□□□ 1.79
NUP50-210ENST00000434760 ARHGAP35Q9NRY4 1499 aa26.22■■□□□ 1.79
NUP50-210ENST00000434760 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
NUP50-210ENST00000434760 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
NUP50-210ENST00000434760 CDK13Q14004 1512 aaKnown RBP26.15■■□□□ 1.78
NUP50-210ENST00000434760 ARAP3Q8WWN8 1544 aa26.15■■□□□ 1.78
NUP50-210ENST00000434760 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
NUP50-210ENST00000434760 TTC37Q6PGP7 1564 aa26.12■■□□□ 1.77
NUP50-210ENST00000434760 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
NUP50-210ENST00000434760 KDM4FA0A1W2PPD8 638 aa26.12■■□□□ 1.77
NUP50-210ENST00000434760 FRMPD1Q5SYB0 1578 aa26.11■■□□□ 1.77
NUP50-210ENST00000434760 ADGRL1O94910 1474 aa26.11■■□□□ 1.77
NUP50-210ENST00000434760 FMN1Q68DA7 1419 aa26.09■■□□□ 1.77
NUP50-210ENST00000434760 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
NUP50-210ENST00000434760 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
NUP50-210ENST00000434760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
NUP50-210ENST00000434760 NEO1Q92859 1461 aa26.08■■□□□ 1.77
NUP50-210ENST00000434760 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
NUP50-210ENST00000434760 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
NUP50-210ENST00000434760 RICTORQ6R327 1708 aa26.02■■□□□ 1.76
NUP50-210ENST00000434760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
NUP50-210ENST00000434760 HNRNPUL2Q1KMD3 747 aaKnown RBP26.01■■□□□ 1.75
NUP50-210ENST00000434760 PHLDB1Q86UU1 1377 aa26.01■■□□□ 1.75
NUP50-210ENST00000434760 KIF14Q15058 1648 aa25.97■■□□□ 1.75
NUP50-210ENST00000434760 MYO5CQ9NQX4 1742 aa25.95■■□□□ 1.74
NUP50-210ENST00000434760 FANCAO15360 1455 aa25.94■■□□□ 1.74
NUP50-210ENST00000434760 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
NUP50-210ENST00000434760 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
NUP50-210ENST00000434760 ZMYM4Q5VZL5 1548 aa25.9■■□□□ 1.74
NUP50-210ENST00000434760 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
NUP50-210ENST00000434760 TROQ12816 1431 aaPredicted RBP25.87■■□□□ 1.73
NUP50-210ENST00000434760 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
NUP50-210ENST00000434760 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
NUP50-210ENST00000434760 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
NUP50-210ENST00000434760 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
NUP50-210ENST00000434760 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
NUP50-210ENST00000434760 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
NUP50-210ENST00000434760 PLCH2O75038 1416 aa25.83■■□□□ 1.73
NUP50-210ENST00000434760 CLIP1P30622 1438 aa25.82■■□□□ 1.72
NUP50-210ENST00000434760 BCORL1Q5H9F3 1711 aa25.8■■□□□ 1.72
NUP50-210ENST00000434760 SIGLEC1Q9BZZ2 1709 aa25.8■■□□□ 1.72
NUP50-210ENST00000434760 PREX2Q70Z35 1606 aa25.79■■□□□ 1.72
NUP50-210ENST00000434760 CDC42BPBQ9Y5S2 1711 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms