RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 NUP160Q12769 1436 aa35.62■■■■□ 3.29
TOP3B-205ENST00000434517 CSRNP3Q8WYN3 585 aa35.61■■■■□ 3.29
TOP3B-205ENST00000434517 RAPGEF2Q9Y4G8 1499 aa35.6■■■■□ 3.29
TOP3B-205ENST00000434517 ARAP1Q96P48 1450 aa35.53■■■■□ 3.28
TOP3B-205ENST00000434517 PRXQ9BXM0 1461 aa35.53■■■■□ 3.28
TOP3B-205ENST00000434517 KIAA0586Q9BVV6 1533 aa35.39■■■■□ 3.26
TOP3B-205ENST00000434517 AEBP2Q6ZN18 517 aaPredicted RBP35.38■■■■□ 3.25
TOP3B-205ENST00000434517 KIF21BO75037 1637 aa35.35■■■■□ 3.25
TOP3B-205ENST00000434517 SHROOM2Q13796 1616 aa35.33■■■■□ 3.25
TOP3B-205ENST00000434517 CTTNBP2Q8WZ74 1663 aa35.32■■■■□ 3.24
TOP3B-205ENST00000434517 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
TOP3B-205ENST00000434517 JPH4Q96JJ6 628 aa35.27■■■■□ 3.24
TOP3B-205ENST00000434517 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.23
TOP3B-205ENST00000434517 EHMT2Q96KQ7 1210 aa35.19■■■■□ 3.22
TOP3B-205ENST00000434517 ERCC6L2Q5T890 1561 aa35.18■■■■□ 3.22
TOP3B-205ENST00000434517 GOLGA3Q08378 1498 aa35.17■■■■□ 3.22
TOP3B-205ENST00000434517 UGGT2Q9NYU1 1516 aa35.07■■■■□ 3.21
TOP3B-205ENST00000434517 UBTFP17480 764 aaKnown RBP35.07■■■■□ 3.2
TOP3B-205ENST00000434517 CARMIL2Q6F5E8 1435 aa35.04■■■■□ 3.2
TOP3B-205ENST00000434517 DISP1Q96F81 1524 aa34.96■■■■□ 3.19
TOP3B-205ENST00000434517 KIAA0556O60303 1618 aa34.95■■■■□ 3.18
TOP3B-205ENST00000434517 RANGAP1P46060 587 aaPredicted RBP34.91■■■■□ 3.18
TOP3B-205ENST00000434517 TNIKQ9UKE5 1360 aa34.87■■■■□ 3.17
TOP3B-205ENST00000434517 TTBK1Q5TCY1 1321 aaPredicted RBP34.85■■■■□ 3.17
TOP3B-205ENST00000434517 SAMD9Q5K651 1589 aa34.83■■■■□ 3.17
TOP3B-205ENST00000434517 PTPRGP23470 1445 aa34.82■■■■□ 3.17
TOP3B-205ENST00000434517 P3H3Q8IVL6 736 aa34.77■■■■□ 3.16
TOP3B-205ENST00000434517 EFCAB5A4FU69 1503 aa34.76■■■■□ 3.15
TOP3B-205ENST00000434517 LOC105371045A0A1W2PR82 267 aa34.68■■■■□ 3.14
TOP3B-205ENST00000434517 FHOD3Q2V2M9 1422 aa34.64■■■■□ 3.14
TOP3B-205ENST00000434517 ADCY10Q96PN6 1610 aa34.63■■■■□ 3.13
TOP3B-205ENST00000434517 ARHGAP35Q9NRY4 1499 aa34.6■■■■□ 3.13
TOP3B-205ENST00000434517 UACAQ9BZF9 1416 aa34.6■■■■□ 3.13
TOP3B-205ENST00000434517 ABCC2Q92887 1545 aa34.55■■■■□ 3.12
TOP3B-205ENST00000434517 PLB1Q6P1J6 1458 aa34.54■■■■□ 3.12
TOP3B-205ENST00000434517 CLIP1P30622 1438 aa34.54■■■■□ 3.12
TOP3B-205ENST00000434517 UHRF1BP1LA0JNW5 1464 aa34.53■■■■□ 3.12
TOP3B-205ENST00000434517 ABCA8O94911 1581 aa34.51■■■■□ 3.12
TOP3B-205ENST00000434517 NPM1P06748 294 aaKnown RBP eCLIP34.51■■■■□ 3.12
TOP3B-205ENST00000434517 CEP162Q5TB80 1403 aa34.47■■■■□ 3.11
TOP3B-205ENST00000434517 RAPGEF6Q8TEU7 1601 aa34.45■■■■□ 3.11
TOP3B-205ENST00000434517 FMN1Q68DA7 1419 aa34.42■■■■□ 3.1
TOP3B-205ENST00000434517 ZCCHC11Q5TAX3 1644 aaKnown RBP34.37■■■■□ 3.09
TOP3B-205ENST00000434517 KDM5BQ9UGL1 1544 aa34.36■■■■□ 3.09
TOP3B-205ENST00000434517 MAPKBP1O60336 1514 aa34.32■■■■□ 3.08
TOP3B-205ENST00000434517 ARID3CA6NKF2 412 aa34.29■■■■□ 3.08
TOP3B-205ENST00000434517 NUP153P49790 1475 aaKnown RBP34.27■■■■□ 3.08
TOP3B-205ENST00000434517 ATP1B4Q9UN42 357 aaPredicted RBP34.25■■■■□ 3.07
TOP3B-205ENST00000434517 HECW1Q76N89 1606 aa34.25■■■■□ 3.07
TOP3B-205ENST00000434517 ATP10BO94823 1461 aa34.22■■■■□ 3.07
TOP3B-205ENST00000434517 PCF11O94913 1555 aaKnown RBP34.22■■■■□ 3.07
TOP3B-205ENST00000434517 ASXL2Q76L83 1435 aa34.21■■■■□ 3.07
TOP3B-205ENST00000434517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.2■■■■□ 3.07
TOP3B-205ENST00000434517 HNRNPUL2Q1KMD3 747 aaKnown RBP34.2■■■■□ 3.07
TOP3B-205ENST00000434517 CASKIN1Q8WXD9 1431 aa34.17■■■■□ 3.06
TOP3B-205ENST00000434517 KIF13AQ9H1H9 1805 aa34.16■■■■□ 3.06
TOP3B-205ENST00000434517 FYCO1Q9BQS8 1478 aa34.13■■■■□ 3.05
TOP3B-205ENST00000434517 WDR7Q9Y4E6 1490 aa34.11■■■■□ 3.05
TOP3B-205ENST00000434517 EPRSP07814 1512 aaKnown RBP34.1■■■■□ 3.05
TOP3B-205ENST00000434517 CDK13Q14004 1512 aaKnown RBP34.1■■■■□ 3.05
TOP3B-205ENST00000434517 ABCC10Q5T3U5 1492 aa34.1■■■■□ 3.05
TOP3B-205ENST00000434517 DIP2BQ9P265 1576 aa34.1■■■■□ 3.05
TOP3B-205ENST00000434517 LRRIQ1Q96JM4 1722 aa34.08■■■■□ 3.05
TOP3B-205ENST00000434517 FAM69CQ0P6D2 419 aa34.05■■■■□ 3.04
TOP3B-205ENST00000434517 CCDC18Q5T9S5 1454 aa34.03■■■■□ 3.04
TOP3B-205ENST00000434517 VPS8Q8N3P4 1428 aa34.03■■■■□ 3.04
TOP3B-205ENST00000434517 PLEKHD1A6NEE1 506 aa33.99■■■■□ 3.03
TOP3B-205ENST00000434517 KCNH8Q96L42 1107 aa33.99■■■■□ 3.03
TOP3B-205ENST00000434517 GLI2P10070 1586 aa33.96■■■■□ 3.03
TOP3B-205ENST00000434517 CDK11AQ9UQ88 783 aaPredicted RBP33.95■■■■□ 3.03
TOP3B-205ENST00000434517 KDM4FA0A1W2PPD8 638 aa33.94■■■■□ 3.02
TOP3B-205ENST00000434517 ILDR1Q86SU0 546 aaPredicted RBP33.92■■■■□ 3.02
TOP3B-205ENST00000434517 TSPOAP1O95153 1857 aa33.88■■■■□ 3.01
TOP3B-205ENST00000434517 MAP3K4Q9Y6R4 1608 aa33.85■■■■□ 3.01
TOP3B-205ENST00000434517 CFAP43Q8NDM7 1665 aa33.84■■■■□ 3.01
TOP3B-205ENST00000434517 TROQ12816 1431 aaPredicted RBP33.82■■■■□ 3
TOP3B-205ENST00000434517 ABCA9Q8IUA7 1624 aa33.79■■■■□ 3
TOP3B-205ENST00000434517 KDM6BO15054 1643 aa33.77■■■■□ 3
TOP3B-205ENST00000434517 KIF14Q15058 1648 aa33.77■■■■□ 3
TOP3B-205ENST00000434517 MAGI3Q5TCQ9 1506 aa33.77■■■■□ 3
TOP3B-205ENST00000434517 CD109Q6YHK3 1445 aa33.76■■■□□ 2.99
TOP3B-205ENST00000434517 TIAM1Q13009 1591 aa33.75■■■□□ 2.99
TOP3B-205ENST00000434517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.73■■■□□ 2.99
TOP3B-205ENST00000434517 PPRC1Q5VV67 1664 aaKnown RBP33.72■■■□□ 2.99
TOP3B-205ENST00000434517 MTUS2Q5JR59 1369 aa33.72■■■□□ 2.99
TOP3B-205ENST00000434517 TTC37Q6PGP7 1564 aa33.71■■■□□ 2.99
TOP3B-205ENST00000434517 APLP2Q06481 763 aa33.69■■■□□ 2.98
TOP3B-205ENST00000434517 TEX14Q8IWB6 1497 aa33.67■■■□□ 2.98
TOP3B-205ENST00000434517 EHBP1L1Q8N3D4 1523 aa33.67■■■□□ 2.98
TOP3B-205ENST00000434517 MAP3K1Q13233 1512 aa33.66■■■□□ 2.98
TOP3B-205ENST00000434517 MYO5CQ9NQX4 1742 aa33.61■■■□□ 2.97
TOP3B-205ENST00000434517 LRRC9Q6ZRR7 1453 aa33.57■■■□□ 2.97
TOP3B-205ENST00000434517 SUPT6HQ7KZ85 1726 aaKnown RBP33.54■■■□□ 2.96
TOP3B-205ENST00000434517 KANK4Q5T7N3 995 aaPredicted RBP33.51■■■□□ 2.95
TOP3B-205ENST00000434517 PLCH2O75038 1416 aa33.51■■■□□ 2.95
TOP3B-205ENST00000434517 CFAP74Q9C0B2 1584 aa33.5■■■□□ 2.95
TOP3B-205ENST00000434517 CDC42BPAQ5VT25 1732 aa33.48■■■□□ 2.95
TOP3B-205ENST00000434517 PREX2Q70Z35 1606 aa33.48■■■□□ 2.95
TOP3B-205ENST00000434517 FANCAO15360 1455 aa33.47■■■□□ 2.95
TOP3B-205ENST00000434517 NEO1Q92859 1461 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms