RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 LOC105371045A0A1W2PR82 267 aa37.73■■■■□ 3.63
SMARCAL1-208ENST00000434435 IQGAP2Q13576 1575 aa37.66■■■■□ 3.62
SMARCAL1-208ENST00000434435 KIAA0586Q9BVV6 1533 aa37.65■■■■□ 3.62
SMARCAL1-208ENST00000434435 TNIKQ9UKE5 1360 aa37.64■■■■□ 3.62
SMARCAL1-208ENST00000434435 CLASP1Q7Z460 1538 aa37.63■■■■□ 3.61
SMARCAL1-208ENST00000434435 OSCARQ8IYS5 282 aa37.56■■■■□ 3.6
SMARCAL1-208ENST00000434435 SHROOM2Q13796 1616 aa37.48■■■■□ 3.59
SMARCAL1-208ENST00000434435 UGGT2Q9NYU1 1516 aa37.44■■■■□ 3.58
SMARCAL1-208ENST00000434435 CEP162Q5TB80 1403 aa37.37■■■■□ 3.57
SMARCAL1-208ENST00000434435 EFCAB5A4FU69 1503 aa37.36■■■■□ 3.57
SMARCAL1-208ENST00000434435 SAMD9Q5K651 1589 aa37.35■■■■□ 3.57
SMARCAL1-208ENST00000434435 JPH4Q96JJ6 628 aa37.34■■■■□ 3.57
SMARCAL1-208ENST00000434435 RANGAP1P46060 587 aaPredicted RBP37.32■■■■□ 3.56
SMARCAL1-208ENST00000434435 CLIP1P30622 1438 aa37.31■■■■□ 3.56
SMARCAL1-208ENST00000434435 KIAA0556O60303 1618 aa37.29■■■■□ 3.56
SMARCAL1-208ENST00000434435 DISP1Q96F81 1524 aa37.26■■■■□ 3.55
SMARCAL1-208ENST00000434435 PRG4Q92954 1404 aaPredicted RBP37.25■■■■□ 3.55
SMARCAL1-208ENST00000434435 ARHGAP35Q9NRY4 1499 aa37.24■■■■□ 3.55
SMARCAL1-208ENST00000434435 CARMIL2Q6F5E8 1435 aa37.23■■■■□ 3.55
SMARCAL1-208ENST00000434435 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
SMARCAL1-208ENST00000434435 FHOD3Q2V2M9 1422 aa37.1■■■■□ 3.53
SMARCAL1-208ENST00000434435 ARAP1Q96P48 1450 aa37.09■■■■□ 3.53
SMARCAL1-208ENST00000434435 P3H3Q8IVL6 736 aa37.07■■■■□ 3.52
SMARCAL1-208ENST00000434435 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
SMARCAL1-208ENST00000434435 RIMBP3CA6NJZ7 1639 aa37.02■■■■□ 3.52
SMARCAL1-208ENST00000434435 RIMBP3BA6NNM3 1639 aa37.02■■■■□ 3.52
SMARCAL1-208ENST00000434435 RIMBP3Q9UFD9 1639 aa37.02■■■■□ 3.52
SMARCAL1-208ENST00000434435 FMN1Q68DA7 1419 aa36.93■■■■□ 3.5
SMARCAL1-208ENST00000434435 PTPRGP23470 1445 aa36.9■■■■□ 3.5
SMARCAL1-208ENST00000434435 TTBK1Q5TCY1 1321 aaPredicted RBP36.86■■■■□ 3.49
SMARCAL1-208ENST00000434435 VPS8Q8N3P4 1428 aa36.86■■■■□ 3.49
SMARCAL1-208ENST00000434435 PCF11O94913 1555 aaKnown RBP36.84■■■■□ 3.49
SMARCAL1-208ENST00000434435 RAPGEF6Q8TEU7 1601 aa36.83■■■■□ 3.49
SMARCAL1-208ENST00000434435 ABCA8O94911 1581 aa36.8■■■■□ 3.48
SMARCAL1-208ENST00000434435 HECW1Q76N89 1606 aa36.76■■■■□ 3.48
SMARCAL1-208ENST00000434435 PLB1Q6P1J6 1458 aa36.75■■■■□ 3.47
SMARCAL1-208ENST00000434435 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
SMARCAL1-208ENST00000434435 CASKIN1Q8WXD9 1431 aa36.74■■■■□ 3.47
SMARCAL1-208ENST00000434435 UACAQ9BZF9 1416 aa36.71■■■■□ 3.47
SMARCAL1-208ENST00000434435 ABCC2Q92887 1545 aa36.69■■■■□ 3.46
SMARCAL1-208ENST00000434435 DNAJC5Q9H3Z4 198 aa36.69■■■■□ 3.46
SMARCAL1-208ENST00000434435 LRRIQ1Q96JM4 1722 aa36.67■■■■□ 3.46
SMARCAL1-208ENST00000434435 ADCY10Q96PN6 1610 aa36.65■■■■□ 3.46
SMARCAL1-208ENST00000434435 UHRF1BP1LA0JNW5 1464 aa36.64■■■■□ 3.46
SMARCAL1-208ENST00000434435 NUP153P49790 1475 aaKnown RBP36.61■■■■□ 3.45
SMARCAL1-208ENST00000434435 ATP1B4Q9UN42 357 aaPredicted RBP36.57■■■■□ 3.44
SMARCAL1-208ENST00000434435 CFAP43Q8NDM7 1665 aa36.56■■■■□ 3.44
SMARCAL1-208ENST00000434435 CYB5RLQ6IPT4 315 aa36.55■■■■□ 3.44
SMARCAL1-208ENST00000434435 CCDC18Q5T9S5 1454 aa36.55■■■■□ 3.44
SMARCAL1-208ENST00000434435 EPRSP07814 1512 aaKnown RBP36.53■■■■□ 3.44
SMARCAL1-208ENST00000434435 ZCCHC11Q5TAX3 1644 aaKnown RBP36.5■■■■□ 3.43
SMARCAL1-208ENST00000434435 CDK13Q14004 1512 aaKnown RBP36.48■■■■□ 3.43
SMARCAL1-208ENST00000434435 TIAM1Q13009 1591 aa36.47■■■■□ 3.43
SMARCAL1-208ENST00000434435 KDM5BQ9UGL1 1544 aa36.46■■■■□ 3.43
SMARCAL1-208ENST00000434435 MAP3K1Q13233 1512 aa36.45■■■■□ 3.43
SMARCAL1-208ENST00000434435 ATP10BO94823 1461 aa36.43■■■■□ 3.42
SMARCAL1-208ENST00000434435 APLP2Q06481 763 aa36.42■■■■□ 3.42
SMARCAL1-208ENST00000434435 ARID3CA6NKF2 412 aa36.4■■■■□ 3.42
SMARCAL1-208ENST00000434435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
SMARCAL1-208ENST00000434435 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
SMARCAL1-208ENST00000434435 NPM1P06748 294 aaKnown RBP eCLIP36.31■■■■□ 3.4
SMARCAL1-208ENST00000434435 EHBP1L1Q8N3D4 1523 aa36.26■■■■□ 3.4
SMARCAL1-208ENST00000434435 CDK11AQ9UQ88 783 aaPredicted RBP36.25■■■■□ 3.39
SMARCAL1-208ENST00000434435 MAGI3Q5TCQ9 1506 aa36.24■■■■□ 3.39
SMARCAL1-208ENST00000434435 LRRC9Q6ZRR7 1453 aa36.24■■■■□ 3.39
SMARCAL1-208ENST00000434435 MAPKBP1O60336 1514 aa36.21■■■■□ 3.39
SMARCAL1-208ENST00000434435 MTUS2Q5JR59 1369 aa36.21■■■■□ 3.39
SMARCAL1-208ENST00000434435 TROQ12816 1431 aaPredicted RBP36.17■■■■□ 3.38
SMARCAL1-208ENST00000434435 PLEKHD1A6NEE1 506 aa36.16■■■■□ 3.38
SMARCAL1-208ENST00000434435 WDR7Q9Y4E6 1490 aa36.16■■■■□ 3.38
SMARCAL1-208ENST00000434435 ASXL2Q76L83 1435 aa36.16■■■■□ 3.38
SMARCAL1-208ENST00000434435 SUPT6HQ7KZ85 1726 aaKnown RBP36.15■■■■□ 3.38
SMARCAL1-208ENST00000434435 KANK4Q5T7N3 995 aaPredicted RBP36.13■■■■□ 3.37
SMARCAL1-208ENST00000434435 KIF14Q15058 1648 aa36.12■■■■□ 3.37
SMARCAL1-208ENST00000434435 PPARGC1BQ86YN6 1023 aaKnown RBP36.02■■■■□ 3.36
SMARCAL1-208ENST00000434435 NCOA2Q15596 1464 aa35.97■■■■□ 3.35
SMARCAL1-208ENST00000434435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.94■■■■□ 3.34
SMARCAL1-208ENST00000434435 ABCA9Q8IUA7 1624 aa35.94■■■■□ 3.34
SMARCAL1-208ENST00000434435 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
SMARCAL1-208ENST00000434435 DIP2BQ9P265 1576 aa35.93■■■■□ 3.34
SMARCAL1-208ENST00000434435 KCNH8Q96L42 1107 aa35.93■■■■□ 3.34
SMARCAL1-208ENST00000434435 MYO5CQ9NQX4 1742 aa35.91■■■■□ 3.34
SMARCAL1-208ENST00000434435 ITSN2Q9NZM3 1697 aa35.91■■■■□ 3.34
SMARCAL1-208ENST00000434435 ABCC10Q5T3U5 1492 aa35.91■■■■□ 3.34
SMARCAL1-208ENST00000434435 CDC42BPAQ5VT25 1732 aa35.9■■■■□ 3.34
SMARCAL1-208ENST00000434435 KIF13AQ9H1H9 1805 aa35.9■■■■□ 3.34
SMARCAL1-208ENST00000434435 GLI2P10070 1586 aa35.89■■■■□ 3.34
SMARCAL1-208ENST00000434435 PREX2Q70Z35 1606 aa35.83■■■■□ 3.33
SMARCAL1-208ENST00000434435 CCNB3Q8WWL7 1395 aa35.81■■■■□ 3.32
SMARCAL1-208ENST00000434435 MAP3K4Q9Y6R4 1608 aa35.81■■■■□ 3.32
SMARCAL1-208ENST00000434435 CDC42BPBQ9Y5S2 1711 aa35.8■■■■□ 3.32
SMARCAL1-208ENST00000434435 PHLDB1Q86UU1 1377 aa35.79■■■■□ 3.32
SMARCAL1-208ENST00000434435 MYOM3Q5VTT5 1437 aa35.77■■■■□ 3.32
SMARCAL1-208ENST00000434435 GPATCH8Q9UKJ3 1502 aaKnown RBP35.76■■■■□ 3.31
SMARCAL1-208ENST00000434435 ARAP3Q8WWN8 1544 aa35.72■■■■□ 3.31
SMARCAL1-208ENST00000434435 FAM69CQ0P6D2 419 aa35.71■■■■□ 3.31
SMARCAL1-208ENST00000434435 TSPOAP1O95153 1857 aa35.69■■■■□ 3.3
SMARCAL1-208ENST00000434435 CD109Q6YHK3 1445 aa35.68■■■■□ 3.3
SMARCAL1-208ENST00000434435 ARHGAP5Q13017 1502 aa35.67■■■■□ 3.3
SMARCAL1-208ENST00000434435 PLCH2O75038 1416 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms