RNA–Protein interactions for RNA: ENST00000434081.1

LINC00163-201, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best) BASIC

Gene LINC00163, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-201ENST00000434081 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
LINC00163-201ENST00000434081 MAP3K1Q13233 1512 aa21.92■■□□□ 1.1
LINC00163-201ENST00000434081 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
LINC00163-201ENST00000434081 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
LINC00163-201ENST00000434081 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
LINC00163-201ENST00000434081 TIAM1Q13009 1591 aa21.9■■□□□ 1.1
LINC00163-201ENST00000434081 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
LINC00163-201ENST00000434081 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
LINC00163-201ENST00000434081 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
LINC00163-201ENST00000434081 CTTNBP2Q8WZ74 1663 aa21.86■■□□□ 1.09
LINC00163-201ENST00000434081 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
LINC00163-201ENST00000434081 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
LINC00163-201ENST00000434081 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.09
LINC00163-201ENST00000434081 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
LINC00163-201ENST00000434081 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
LINC00163-201ENST00000434081 ITGAEP38570 1179 aa21.8■■□□□ 1.08
LINC00163-201ENST00000434081 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
LINC00163-201ENST00000434081 FHOD3Q2V2M9 1422 aa21.79■■□□□ 1.08
LINC00163-201ENST00000434081 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
LINC00163-201ENST00000434081 CFAP43Q8NDM7 1665 aa21.76■■□□□ 1.07
LINC00163-201ENST00000434081 FYCO1Q9BQS8 1478 aa21.75■■□□□ 1.07
LINC00163-201ENST00000434081 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
LINC00163-201ENST00000434081 MIER1Q8N108 512 aa21.73■■□□□ 1.07
LINC00163-201ENST00000434081 CASKIN1Q8WXD9 1431 aa21.73■■□□□ 1.07
LINC00163-201ENST00000434081 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
LINC00163-201ENST00000434081 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
LINC00163-201ENST00000434081 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.07
LINC00163-201ENST00000434081 SAMD9Q5K651 1589 aa21.69■■□□□ 1.06
LINC00163-201ENST00000434081 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
LINC00163-201ENST00000434081 WDR62O43379 1518 aa21.66■■□□□ 1.06
LINC00163-201ENST00000434081 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.05
LINC00163-201ENST00000434081 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
LINC00163-201ENST00000434081 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
LINC00163-201ENST00000434081 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
LINC00163-201ENST00000434081 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
LINC00163-201ENST00000434081 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
LINC00163-201ENST00000434081 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
LINC00163-201ENST00000434081 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
LINC00163-201ENST00000434081 MAPKBP1O60336 1514 aa21.59■■□□□ 1.05
LINC00163-201ENST00000434081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
LINC00163-201ENST00000434081 THOC2Q8NI27 1593 aaKnown RBP21.54■■□□□ 1.04
LINC00163-201ENST00000434081 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
LINC00163-201ENST00000434081 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
LINC00163-201ENST00000434081 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
LINC00163-201ENST00000434081 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
LINC00163-201ENST00000434081 FGD6Q6ZV73 1430 aa21.48■■□□□ 1.03
LINC00163-201ENST00000434081 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
LINC00163-201ENST00000434081 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
LINC00163-201ENST00000434081 UGGT2Q9NYU1 1516 aa21.43■■□□□ 1.02
LINC00163-201ENST00000434081 PELP1Q8IZL8 1130 aaKnown RBP21.43■■□□□ 1.02
LINC00163-201ENST00000434081 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
LINC00163-201ENST00000434081 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
LINC00163-201ENST00000434081 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
LINC00163-201ENST00000434081 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
LINC00163-201ENST00000434081 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.02
LINC00163-201ENST00000434081 NCOA2Q15596 1464 aa21.38■■□□□ 1.01
LINC00163-201ENST00000434081 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
LINC00163-201ENST00000434081 SUPT6HQ7KZ85 1726 aaKnown RBP21.37■■□□□ 1.01
LINC00163-201ENST00000434081 MYOM3Q5VTT5 1437 aa21.36■■□□□ 1.01
LINC00163-201ENST00000434081 MAGI1Q96QZ7 1491 aaPredicted RBP21.36■■□□□ 1.01
LINC00163-201ENST00000434081 TIMELESSQ9UNS1 1208 aa21.36■■□□□ 1.01
LINC00163-201ENST00000434081 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
LINC00163-201ENST00000434081 HFM1A2PYH4 1435 aa21.33■■□□□ 1
LINC00163-201ENST00000434081 EPRSP07814 1512 aaKnown RBP21.32■■□□□ 1
LINC00163-201ENST00000434081 ARHGEF11O15085 1522 aa21.31■■□□□ 1
LINC00163-201ENST00000434081 MAGI3Q5TCQ9 1506 aa21.31■■□□□ 1
LINC00163-201ENST00000434081 KIAA0556O60303 1618 aa21.3■■□□□ 1
LINC00163-201ENST00000434081 DISP1Q96F81 1524 aa21.3■■□□□ 1
LINC00163-201ENST00000434081 SYNJ2O15056 1496 aa21.29■■□□□ 1
LINC00163-201ENST00000434081 PTPN23Q9H3S7 1636 aa21.26■□□□□ 0.99
LINC00163-201ENST00000434081 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
LINC00163-201ENST00000434081 NAIPQ13075 1403 aa21.25■□□□□ 0.99
LINC00163-201ENST00000434081 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
LINC00163-201ENST00000434081 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
LINC00163-201ENST00000434081 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
LINC00163-201ENST00000434081 CEP170Q5SW79 1584 aa21.22■□□□□ 0.99
LINC00163-201ENST00000434081 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
LINC00163-201ENST00000434081 NUP160Q12769 1436 aa21.18■□□□□ 0.98
LINC00163-201ENST00000434081 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
LINC00163-201ENST00000434081 RAPGEF6Q8TEU7 1601 aa21.17■□□□□ 0.98
LINC00163-201ENST00000434081 NUP153P49790 1475 aaKnown RBP21.17■□□□□ 0.98
LINC00163-201ENST00000434081 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
LINC00163-201ENST00000434081 ARID3CA6NKF2 412 aa21.14■□□□□ 0.98
LINC00163-201ENST00000434081 FBLN2P98095 1184 aa21.14■□□□□ 0.98
LINC00163-201ENST00000434081 DDX10Q13206 875 aaKnown RBP21.13■□□□□ 0.97
LINC00163-201ENST00000434081 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
LINC00163-201ENST00000434081 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
LINC00163-201ENST00000434081 CHIC2Q9UKJ5 165 aa21.11■□□□□ 0.97
LINC00163-201ENST00000434081 AKNAQ7Z591 1439 aa21.09■□□□□ 0.97
LINC00163-201ENST00000434081 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
LINC00163-201ENST00000434081 JPH4Q96JJ6 628 aa21.08■□□□□ 0.97
LINC00163-201ENST00000434081 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
LINC00163-201ENST00000434081 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
LINC00163-201ENST00000434081 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
LINC00163-201ENST00000434081 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
LINC00163-201ENST00000434081 TROQ12816 1431 aaPredicted RBP21.02■□□□□ 0.95
LINC00163-201ENST00000434081 TRIM52Q96A61 297 aa21■□□□□ 0.95
LINC00163-201ENST00000434081 DENND4BO75064 1496 aaPredicted RBP21■□□□□ 0.95
LINC00163-201ENST00000434081 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
LINC00163-201ENST00000434081 KDM6BO15054 1643 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms