RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.6
CNOT9-205ENST00000433439 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.6
CNOT9-205ENST00000433439 UBTFP17480 764 aaKnown RBP25.07■■□□□ 1.6
CNOT9-205ENST00000433439 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
CNOT9-205ENST00000433439 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
CNOT9-205ENST00000433439 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
CNOT9-205ENST00000433439 CTTNBP2Q8WZ74 1663 aa24.98■■□□□ 1.59
CNOT9-205ENST00000433439 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
CNOT9-205ENST00000433439 RANGAP1P46060 587 aaPredicted RBP24.96■■□□□ 1.59
CNOT9-205ENST00000433439 IQGAP2Q13576 1575 aa24.94■■□□□ 1.58
CNOT9-205ENST00000433439 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
CNOT9-205ENST00000433439 JPH4Q96JJ6 628 aa24.93■■□□□ 1.58
CNOT9-205ENST00000433439 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
CNOT9-205ENST00000433439 PRG4Q92954 1404 aaPredicted RBP24.85■■□□□ 1.57
CNOT9-205ENST00000433439 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
CNOT9-205ENST00000433439 TRHP20396 242 aaPredicted RBP24.84■■□□□ 1.57
CNOT9-205ENST00000433439 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
CNOT9-205ENST00000433439 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
CNOT9-205ENST00000433439 UGGT2Q9NYU1 1516 aa24.78■■□□□ 1.56
CNOT9-205ENST00000433439 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
CNOT9-205ENST00000433439 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
CNOT9-205ENST00000433439 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
CNOT9-205ENST00000433439 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
CNOT9-205ENST00000433439 DISP1Q96F81 1524 aa24.71■■□□□ 1.55
CNOT9-205ENST00000433439 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
CNOT9-205ENST00000433439 CLIP1P30622 1438 aa24.65■■□□□ 1.54
CNOT9-205ENST00000433439 SAMD9Q5K651 1589 aa24.64■■□□□ 1.54
CNOT9-205ENST00000433439 CEP162Q5TB80 1403 aa24.64■■□□□ 1.54
CNOT9-205ENST00000433439 EFCAB5A4FU69 1503 aa24.63■■□□□ 1.53
CNOT9-205ENST00000433439 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
CNOT9-205ENST00000433439 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
CNOT9-205ENST00000433439 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
CNOT9-205ENST00000433439 PTPRGP23470 1445 aa24.61■■□□□ 1.53
CNOT9-205ENST00000433439 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.5
CNOT9-205ENST00000433439 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
CNOT9-205ENST00000433439 FMN1Q68DA7 1419 aa24.43■■□□□ 1.5
CNOT9-205ENST00000433439 UACAQ9BZF9 1416 aa24.43■■□□□ 1.5
CNOT9-205ENST00000433439 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
CNOT9-205ENST00000433439 ABCA8O94911 1581 aa24.38■■□□□ 1.49
CNOT9-205ENST00000433439 RAPGEF6Q8TEU7 1601 aa24.37■■□□□ 1.49
CNOT9-205ENST00000433439 ADCY10Q96PN6 1610 aa24.37■■□□□ 1.49
CNOT9-205ENST00000433439 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
CNOT9-205ENST00000433439 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.49
CNOT9-205ENST00000433439 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
CNOT9-205ENST00000433439 UHRF1BP1LA0JNW5 1464 aa24.32■■□□□ 1.48
CNOT9-205ENST00000433439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
CNOT9-205ENST00000433439 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
CNOT9-205ENST00000433439 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CNOT9-205ENST00000433439 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
CNOT9-205ENST00000433439 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
CNOT9-205ENST00000433439 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
CNOT9-205ENST00000433439 FYCO1Q9BQS8 1478 aa24.24■■□□□ 1.47
CNOT9-205ENST00000433439 ZCCHC11Q5TAX3 1644 aaKnown RBP24.22■■□□□ 1.47
CNOT9-205ENST00000433439 KDM5BQ9UGL1 1544 aa24.22■■□□□ 1.47
CNOT9-205ENST00000433439 ATP10BO94823 1461 aa24.21■■□□□ 1.47
CNOT9-205ENST00000433439 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.47
CNOT9-205ENST00000433439 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
CNOT9-205ENST00000433439 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
CNOT9-205ENST00000433439 APLP2Q06481 763 aa24.13■■□□□ 1.45
CNOT9-205ENST00000433439 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
CNOT9-205ENST00000433439 ASXL2Q76L83 1435 aa24.11■■□□□ 1.45
CNOT9-205ENST00000433439 PLEKHD1A6NEE1 506 aa24.1■■□□□ 1.45
CNOT9-205ENST00000433439 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
CNOT9-205ENST00000433439 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.45
CNOT9-205ENST00000433439 MAPKBP1O60336 1514 aa24.08■■□□□ 1.45
CNOT9-205ENST00000433439 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
CNOT9-205ENST00000433439 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
CNOT9-205ENST00000433439 ILDR1Q86SU0 546 aaPredicted RBP24.02■■□□□ 1.44
CNOT9-205ENST00000433439 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
CNOT9-205ENST00000433439 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
CNOT9-205ENST00000433439 MAGI3Q5TCQ9 1506 aa23.99■■□□□ 1.43
CNOT9-205ENST00000433439 FAM69CQ0P6D2 419 aa23.97■■□□□ 1.43
CNOT9-205ENST00000433439 TROQ12816 1431 aaPredicted RBP23.97■■□□□ 1.43
CNOT9-205ENST00000433439 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
CNOT9-205ENST00000433439 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
CNOT9-205ENST00000433439 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
CNOT9-205ENST00000433439 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
CNOT9-205ENST00000433439 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
CNOT9-205ENST00000433439 LRRC9Q6ZRR7 1453 aa23.92■■□□□ 1.42
CNOT9-205ENST00000433439 EHBP1L1Q8N3D4 1523 aa23.91■■□□□ 1.42
CNOT9-205ENST00000433439 KIF14Q15058 1648 aa23.91■■□□□ 1.42
CNOT9-205ENST00000433439 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
CNOT9-205ENST00000433439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.41
CNOT9-205ENST00000433439 GLI2P10070 1586 aa23.84■■□□□ 1.41
CNOT9-205ENST00000433439 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
CNOT9-205ENST00000433439 SUPT6HQ7KZ85 1726 aaKnown RBP23.82■■□□□ 1.4
CNOT9-205ENST00000433439 TSPOAP1O95153 1857 aa23.81■■□□□ 1.4
CNOT9-205ENST00000433439 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
CNOT9-205ENST00000433439 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
CNOT9-205ENST00000433439 NCOA2Q15596 1464 aa23.8■■□□□ 1.4
CNOT9-205ENST00000433439 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
CNOT9-205ENST00000433439 CCNB3Q8WWL7 1395 aa23.77■■□□□ 1.4
CNOT9-205ENST00000433439 MYO5CQ9NQX4 1742 aa23.73■■□□□ 1.39
CNOT9-205ENST00000433439 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.38
CNOT9-205ENST00000433439 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.38
CNOT9-205ENST00000433439 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
CNOT9-205ENST00000433439 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
CNOT9-205ENST00000433439 PLCH2O75038 1416 aa23.69■■□□□ 1.38
CNOT9-205ENST00000433439 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
CNOT9-205ENST00000433439 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms