RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
CHFR-203ENST00000432561 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
CHFR-203ENST00000432561 MIER1Q8N108 512 aa24.5■■□□□ 1.51
CHFR-203ENST00000432561 LRRC9Q6ZRR7 1453 aa24.5■■□□□ 1.51
CHFR-203ENST00000432561 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
CHFR-203ENST00000432561 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
CHFR-203ENST00000432561 PHLDB1Q86UU1 1377 aa24.48■■□□□ 1.51
CHFR-203ENST00000432561 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
CHFR-203ENST00000432561 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
CHFR-203ENST00000432561 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
CHFR-203ENST00000432561 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
CHFR-203ENST00000432561 MAP3K1Q13233 1512 aa24.44■■□□□ 1.5
CHFR-203ENST00000432561 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
CHFR-203ENST00000432561 CUL7Q14999 1698 aa24.43■■□□□ 1.5
CHFR-203ENST00000432561 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
CHFR-203ENST00000432561 CTTNBP2Q8WZ74 1663 aa24.41■■□□□ 1.5
CHFR-203ENST00000432561 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
CHFR-203ENST00000432561 CFAP43Q8NDM7 1665 aa24.41■■□□□ 1.5
CHFR-203ENST00000432561 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
CHFR-203ENST00000432561 GTF3C3Q9Y5Q9 886 aa24.37■■□□□ 1.49
CHFR-203ENST00000432561 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
CHFR-203ENST00000432561 ABCA5Q8WWZ7 1642 aa24.33■■□□□ 1.49
CHFR-203ENST00000432561 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
CHFR-203ENST00000432561 EFCAB5A4FU69 1503 aa24.33■■□□□ 1.49
CHFR-203ENST00000432561 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
CHFR-203ENST00000432561 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
CHFR-203ENST00000432561 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
CHFR-203ENST00000432561 SETD5Q9C0A6 1442 aa24.27■■□□□ 1.48
CHFR-203ENST00000432561 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
CHFR-203ENST00000432561 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
CHFR-203ENST00000432561 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.471e-7■■■■■ 49.5
CHFR-203ENST00000432561 LRRIQ1Q96JM4 1722 aa24.2■■□□□ 1.46
CHFR-203ENST00000432561 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
CHFR-203ENST00000432561 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
CHFR-203ENST00000432561 SAMD9Q5K651 1589 aa24.17■■□□□ 1.46
CHFR-203ENST00000432561 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
CHFR-203ENST00000432561 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
CHFR-203ENST00000432561 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
CHFR-203ENST00000432561 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
CHFR-203ENST00000432561 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
CHFR-203ENST00000432561 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
CHFR-203ENST00000432561 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
CHFR-203ENST00000432561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.432e-6■■■□□ 17.8
CHFR-203ENST00000432561 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
CHFR-203ENST00000432561 MAGI3Q5TCQ9 1506 aa24■■□□□ 1.43
CHFR-203ENST00000432561 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
CHFR-203ENST00000432561 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
CHFR-203ENST00000432561 MYOM3Q5VTT5 1437 aa23.96■■□□□ 1.43
CHFR-203ENST00000432561 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
CHFR-203ENST00000432561 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
CHFR-203ENST00000432561 CCDC18Q5T9S5 1454 aa23.95■■□□□ 1.42
CHFR-203ENST00000432561 HIRIP3Q9BW71 556 aaPredicted RBP23.95■■□□□ 1.42
CHFR-203ENST00000432561 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
CHFR-203ENST00000432561 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
CHFR-203ENST00000432561 PTPN23Q9H3S7 1636 aa23.9■■□□□ 1.42
CHFR-203ENST00000432561 CDK13Q14004 1512 aaKnown RBP23.9■■□□□ 1.42
CHFR-203ENST00000432561 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
CHFR-203ENST00000432561 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
CHFR-203ENST00000432561 UGGT2Q9NYU1 1516 aa23.88■■□□□ 1.41
CHFR-203ENST00000432561 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
CHFR-203ENST00000432561 NAIPQ13075 1403 aa23.86■■□□□ 1.41
CHFR-203ENST00000432561 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
CHFR-203ENST00000432561 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
CHFR-203ENST00000432561 HECW1Q76N89 1606 aa23.85■■□□□ 1.41
CHFR-203ENST00000432561 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
CHFR-203ENST00000432561 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.41
CHFR-203ENST00000432561 ARHGEF11O15085 1522 aa23.83■■□□□ 1.4
CHFR-203ENST00000432561 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
CHFR-203ENST00000432561 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
CHFR-203ENST00000432561 WDR62O43379 1518 aa23.79■■□□□ 1.4
CHFR-203ENST00000432561 TONSLQ96HA7 1378 aa23.78■■□□□ 1.4
CHFR-203ENST00000432561 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
CHFR-203ENST00000432561 TIMELESSQ9UNS1 1208 aa23.76■■□□□ 1.39
CHFR-203ENST00000432561 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
CHFR-203ENST00000432561 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
CHFR-203ENST00000432561 KDM6BO15054 1643 aa23.72■■□□□ 1.39
CHFR-203ENST00000432561 DISP1Q96F81 1524 aa23.72■■□□□ 1.39
CHFR-203ENST00000432561 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
CHFR-203ENST00000432561 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
CHFR-203ENST00000432561 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
CHFR-203ENST00000432561 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
CHFR-203ENST00000432561 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
CHFR-203ENST00000432561 FBLN2P98095 1184 aa23.68■■□□□ 1.38
CHFR-203ENST00000432561 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
CHFR-203ENST00000432561 GCC2Q8IWJ2 1684 aa23.64■■□□□ 1.38
CHFR-203ENST00000432561 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.38
CHFR-203ENST00000432561 NUP153P49790 1475 aaKnown RBP23.64■■□□□ 1.38
CHFR-203ENST00000432561 FOXD1Q16676 465 aa23.63■■□□□ 1.37
CHFR-203ENST00000432561 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
CHFR-203ENST00000432561 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
CHFR-203ENST00000432561 RAPGEF6Q8TEU7 1601 aa23.6■■□□□ 1.37
CHFR-203ENST00000432561 KDM5BQ9UGL1 1544 aa23.59■■□□□ 1.37
CHFR-203ENST00000432561 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
CHFR-203ENST00000432561 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
CHFR-203ENST00000432561 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
CHFR-203ENST00000432561 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
CHFR-203ENST00000432561 DAPK1P53355 1430 aa23.54■■□□□ 1.36
CHFR-203ENST00000432561 SUPT16HQ9Y5B9 1047 aaKnown RBP23.52■■□□□ 1.36
CHFR-203ENST00000432561 AKNAQ7Z591 1439 aa23.52■■□□□ 1.35
CHFR-203ENST00000432561 ABCC5O15440 1437 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms