RNA–Protein interactions for RNA: ENST00000432143.2

GTF2I-201, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-201ENST00000432143 CUL7Q14999 1698 aa15.06■□□□□ 0
GTF2I-201ENST00000432143 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
GTF2I-201ENST00000432143 CLIP1P30622 1438 aa15.05■□□□□ -0
GTF2I-201ENST00000432143 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
GTF2I-201ENST00000432143 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
GTF2I-201ENST00000432143 KCNA4P22459 653 aa14.98□□□□□ -0.01
GTF2I-201ENST00000432143 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
GTF2I-201ENST00000432143 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
GTF2I-201ENST00000432143 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
GTF2I-201ENST00000432143 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
GTF2I-201ENST00000432143 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.022e-8■■■■■ 33.4
GTF2I-201ENST00000432143 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
GTF2I-201ENST00000432143 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
GTF2I-201ENST00000432143 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
GTF2I-201ENST00000432143 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
GTF2I-201ENST00000432143 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
GTF2I-201ENST00000432143 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
GTF2I-201ENST00000432143 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
GTF2I-201ENST00000432143 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
GTF2I-201ENST00000432143 EFCAB5A4FU69 1503 aa14.84□□□□□ -0.03
GTF2I-201ENST00000432143 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
GTF2I-201ENST00000432143 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
GTF2I-201ENST00000432143 RANGAP1P46060 587 aaPredicted RBP14.82□□□□□ -0.04
GTF2I-201ENST00000432143 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
GTF2I-201ENST00000432143 PCGF6Q9BYE7 350 aa14.81□□□□□ -0.04
GTF2I-201ENST00000432143 APLP2Q06481 763 aa14.79□□□□□ -0.04
GTF2I-201ENST00000432143 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
GTF2I-201ENST00000432143 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
GTF2I-201ENST00000432143 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
GTF2I-201ENST00000432143 SAMD9Q5K651 1589 aa14.73□□□□□ -0.05
GTF2I-201ENST00000432143 KIAA0586Q9BVV6 1533 aa14.72□□□□□ -0.05
GTF2I-201ENST00000432143 FMN1Q68DA7 1419 aa14.71□□□□□ -0.05
GTF2I-201ENST00000432143 MAP3K1Q13233 1512 aa14.71□□□□□ -0.06
GTF2I-201ENST00000432143 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
GTF2I-201ENST00000432143 FHOD3Q2V2M9 1422 aa14.69□□□□□ -0.06
GTF2I-201ENST00000432143 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
GTF2I-201ENST00000432143 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
GTF2I-201ENST00000432143 NUP160Q12769 1436 aa14.67□□□□□ -0.06
GTF2I-201ENST00000432143 FYCO1Q9BQS8 1478 aa14.67□□□□□ -0.06
GTF2I-201ENST00000432143 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
GTF2I-201ENST00000432143 PCF11O94913 1555 aaKnown RBP14.64□□□□□ -0.07
GTF2I-201ENST00000432143 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
GTF2I-201ENST00000432143 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
GTF2I-201ENST00000432143 TIAM1Q13009 1591 aa14.61□□□□□ -0.07
GTF2I-201ENST00000432143 FBLN2P98095 1184 aa14.59□□□□□ -0.07
GTF2I-201ENST00000432143 TTBK1Q5TCY1 1321 aaPredicted RBP14.58□□□□□ -0.08
GTF2I-201ENST00000432143 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
GTF2I-201ENST00000432143 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
GTF2I-201ENST00000432143 DISP1Q96F81 1524 aa14.56□□□□□ -0.08
GTF2I-201ENST00000432143 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
GTF2I-201ENST00000432143 KANK4Q5T7N3 995 aaPredicted RBP14.55□□□□□ -0.08
GTF2I-201ENST00000432143 CARMIL2Q6F5E8 1435 aa14.55□□□□□ -0.08
GTF2I-201ENST00000432143 CCDC18Q5T9S5 1454 aa14.54□□□□□ -0.08
GTF2I-201ENST00000432143 HECW1Q76N89 1606 aa14.52□□□□□ -0.08
GTF2I-201ENST00000432143 JPH4Q96JJ6 628 aa14.52□□□□□ -0.09
GTF2I-201ENST00000432143 RRBP1Q9P2E9 1410 aaKnown RBP14.5□□□□□ -0.09
GTF2I-201ENST00000432143 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
GTF2I-201ENST00000432143 CHD1O14646 1710 aa14.49□□□□□ -0.09
GTF2I-201ENST00000432143 HRCP23327 699 aa14.48□□□□□ -0.09
GTF2I-201ENST00000432143 MTUS2Q5JR59 1369 aa14.46□□□□□ -0.1
GTF2I-201ENST00000432143 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.1
GTF2I-201ENST00000432143 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
GTF2I-201ENST00000432143 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
GTF2I-201ENST00000432143 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
GTF2I-201ENST00000432143 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
GTF2I-201ENST00000432143 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
GTF2I-201ENST00000432143 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
GTF2I-201ENST00000432143 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
GTF2I-201ENST00000432143 NUP153P49790 1475 aaKnown RBP14.4□□□□□ -0.1
GTF2I-201ENST00000432143 PHLDB1Q86UU1 1377 aa14.4□□□□□ -0.1
GTF2I-201ENST00000432143 LRRIQ1Q96JM4 1722 aa14.39□□□□□ -0.11
GTF2I-201ENST00000432143 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
GTF2I-201ENST00000432143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.38□□□□□ -0.11
GTF2I-201ENST00000432143 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
GTF2I-201ENST00000432143 ABCA8O94911 1581 aa14.37□□□□□ -0.11
GTF2I-201ENST00000432143 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
GTF2I-201ENST00000432143 CDK13Q14004 1512 aaKnown RBP14.36□□□□□ -0.11
GTF2I-201ENST00000432143 PTPRGP23470 1445 aa14.36□□□□□ -0.11
GTF2I-201ENST00000432143 NCOA2Q15596 1464 aa14.36□□□□□ -0.11
GTF2I-201ENST00000432143 PLB1Q6P1J6 1458 aa14.36□□□□□ -0.11
GTF2I-201ENST00000432143 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
GTF2I-201ENST00000432143 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
GTF2I-201ENST00000432143 MAGI3Q5TCQ9 1506 aa14.34□□□□□ -0.11
GTF2I-201ENST00000432143 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
GTF2I-201ENST00000432143 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.11
GTF2I-201ENST00000432143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.129e-9■□□□□ 10.4
GTF2I-201ENST00000432143 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
GTF2I-201ENST00000432143 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
GTF2I-201ENST00000432143 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
GTF2I-201ENST00000432143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
GTF2I-201ENST00000432143 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.13
GTF2I-201ENST00000432143 CCER1Q8TC90 406 aaPredicted RBP14.27□□□□□ -0.13
GTF2I-201ENST00000432143 ATP10BO94823 1461 aa14.25□□□□□ -0.13
GTF2I-201ENST00000432143 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
GTF2I-201ENST00000432143 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
GTF2I-201ENST00000432143 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
GTF2I-201ENST00000432143 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
GTF2I-201ENST00000432143 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
GTF2I-201ENST00000432143 ERCC6L2Q5T890 1561 aa14.24□□□□□ -0.13
GTF2I-201ENST00000432143 UHRF1BP1LA0JNW5 1464 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms