RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
CSTF3-202ENST00000431742 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
CSTF3-202ENST00000431742 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
CSTF3-202ENST00000431742 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
CSTF3-202ENST00000431742 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
CSTF3-202ENST00000431742 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
CSTF3-202ENST00000431742 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
CSTF3-202ENST00000431742 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
CSTF3-202ENST00000431742 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
CSTF3-202ENST00000431742 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
CSTF3-202ENST00000431742 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
CSTF3-202ENST00000431742 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
CSTF3-202ENST00000431742 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
CSTF3-202ENST00000431742 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
CSTF3-202ENST00000431742 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
CSTF3-202ENST00000431742 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
CSTF3-202ENST00000431742 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
CSTF3-202ENST00000431742 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
CSTF3-202ENST00000431742 EFCAB5A4FU69 1503 aa23.56■■□□□ 1.36
CSTF3-202ENST00000431742 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
CSTF3-202ENST00000431742 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
CSTF3-202ENST00000431742 TNIKQ9UKE5 1360 aa23.53■■□□□ 1.36
CSTF3-202ENST00000431742 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
CSTF3-202ENST00000431742 PTPRGP23470 1445 aa23.48■■□□□ 1.35
CSTF3-202ENST00000431742 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
CSTF3-202ENST00000431742 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
CSTF3-202ENST00000431742 ABCA8O94911 1581 aa23.4■■□□□ 1.34
CSTF3-202ENST00000431742 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
CSTF3-202ENST00000431742 ABCC2Q92887 1545 aa23.39■■□□□ 1.34
CSTF3-202ENST00000431742 UHRF1BP1LA0JNW5 1464 aa23.39■■□□□ 1.34
CSTF3-202ENST00000431742 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
CSTF3-202ENST00000431742 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
CSTF3-202ENST00000431742 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
CSTF3-202ENST00000431742 LOC105371045A0A1W2PR82 267 aa23.36■■□□□ 1.33
CSTF3-202ENST00000431742 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
CSTF3-202ENST00000431742 PLB1Q6P1J6 1458 aa23.35■■□□□ 1.33
CSTF3-202ENST00000431742 CLIP1P30622 1438 aa23.34■■□□□ 1.33
CSTF3-202ENST00000431742 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
CSTF3-202ENST00000431742 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.32
CSTF3-202ENST00000431742 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
CSTF3-202ENST00000431742 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
CSTF3-202ENST00000431742 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
CSTF3-202ENST00000431742 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
CSTF3-202ENST00000431742 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
CSTF3-202ENST00000431742 NUP153P49790 1475 aaKnown RBP23.21■■□□□ 1.31
CSTF3-202ENST00000431742 HECW1Q76N89 1606 aa23.2■■□□□ 1.3
CSTF3-202ENST00000431742 PCF11O94913 1555 aaKnown RBP23.2■■□□□ 1.3
CSTF3-202ENST00000431742 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
CSTF3-202ENST00000431742 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
CSTF3-202ENST00000431742 ATP10BO94823 1461 aa23.14■■□□□ 1.29
CSTF3-202ENST00000431742 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
CSTF3-202ENST00000431742 CASKIN1Q8WXD9 1431 aa23.13■■□□□ 1.29
CSTF3-202ENST00000431742 FYCO1Q9BQS8 1478 aa23.12■■□□□ 1.29
CSTF3-202ENST00000431742 DIP2BQ9P265 1576 aa23.1■■□□□ 1.29
CSTF3-202ENST00000431742 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
CSTF3-202ENST00000431742 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.29
CSTF3-202ENST00000431742 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
CSTF3-202ENST00000431742 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
CSTF3-202ENST00000431742 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
CSTF3-202ENST00000431742 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
CSTF3-202ENST00000431742 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
CSTF3-202ENST00000431742 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
CSTF3-202ENST00000431742 GLI2P10070 1586 aa23.02■■□□□ 1.28
CSTF3-202ENST00000431742 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
CSTF3-202ENST00000431742 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
CSTF3-202ENST00000431742 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
CSTF3-202ENST00000431742 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
CSTF3-202ENST00000431742 ABCA9Q8IUA7 1624 aa22.92■■□□□ 1.26
CSTF3-202ENST00000431742 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
CSTF3-202ENST00000431742 MAGI3Q5TCQ9 1506 aa22.91■■□□□ 1.26
CSTF3-202ENST00000431742 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
CSTF3-202ENST00000431742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
CSTF3-202ENST00000431742 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
CSTF3-202ENST00000431742 TSPOAP1O95153 1857 aa22.89■■□□□ 1.25
CSTF3-202ENST00000431742 TIAM1Q13009 1591 aa22.89■■□□□ 1.25
CSTF3-202ENST00000431742 FAM69CQ0P6D2 419 aa22.88■■□□□ 1.25
CSTF3-202ENST00000431742 KIF14Q15058 1648 aa22.87■■□□□ 1.25
CSTF3-202ENST00000431742 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CSTF3-202ENST00000431742 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
CSTF3-202ENST00000431742 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
CSTF3-202ENST00000431742 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
CSTF3-202ENST00000431742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.84■■□□□ 1.25
CSTF3-202ENST00000431742 CDK11AQ9UQ88 783 aaPredicted RBP22.83■■□□□ 1.25
CSTF3-202ENST00000431742 KCNH8Q96L42 1107 aa22.81■■□□□ 1.24
CSTF3-202ENST00000431742 EHBP1L1Q8N3D4 1523 aa22.81■■□□□ 1.24
CSTF3-202ENST00000431742 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
CSTF3-202ENST00000431742 CD109Q6YHK3 1445 aa22.76■■□□□ 1.23
CSTF3-202ENST00000431742 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
CSTF3-202ENST00000431742 SUPT6HQ7KZ85 1726 aaKnown RBP22.73■■□□□ 1.23
CSTF3-202ENST00000431742 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
CSTF3-202ENST00000431742 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
CSTF3-202ENST00000431742 TEX14Q8IWB6 1497 aa22.73■■□□□ 1.23
CSTF3-202ENST00000431742 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
CSTF3-202ENST00000431742 ARAP3Q8WWN8 1544 aa22.71■■□□□ 1.23
CSTF3-202ENST00000431742 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
CSTF3-202ENST00000431742 CFAP74Q9C0B2 1584 aa22.69■■□□□ 1.22
CSTF3-202ENST00000431742 ITSN2Q9NZM3 1697 aa22.65■■□□□ 1.22
CSTF3-202ENST00000431742 PLCH2O75038 1416 aa22.65■■□□□ 1.22
CSTF3-202ENST00000431742 NEO1Q92859 1461 aa22.64■■□□□ 1.21
CSTF3-202ENST00000431742 NCOA2Q15596 1464 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms