RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ARHGEF11O15085 1522 aa30.39■■■□□ 2.46
RFTN1-202ENST00000431547 KIF21BO75037 1637 aa30.35■■■□□ 2.45
RFTN1-202ENST00000431547 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
RFTN1-202ENST00000431547 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
RFTN1-202ENST00000431547 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
RFTN1-202ENST00000431547 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
RFTN1-202ENST00000431547 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
RFTN1-202ENST00000431547 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
RFTN1-202ENST00000431547 GOLGA3Q08378 1498 aa30.23■■■□□ 2.43
RFTN1-202ENST00000431547 ERCC6L2Q5T890 1561 aa30.21■■■□□ 2.43
RFTN1-202ENST00000431547 UGGT2Q9NYU1 1516 aa30.18■■■□□ 2.42
RFTN1-202ENST00000431547 CTTNBP2Q8WZ74 1663 aa30.18■■■□□ 2.42
RFTN1-202ENST00000431547 EHMT2Q96KQ7 1210 aa30.18■■■□□ 2.42
RFTN1-202ENST00000431547 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
RFTN1-202ENST00000431547 UBTFP17480 764 aaKnown RBP30.17■■■□□ 2.42
RFTN1-202ENST00000431547 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
RFTN1-202ENST00000431547 CARMIL2Q6F5E8 1435 aa30.14■■■□□ 2.42
RFTN1-202ENST00000431547 DISP1Q96F81 1524 aa30.1■■■□□ 2.41
RFTN1-202ENST00000431547 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
RFTN1-202ENST00000431547 PTPRGP23470 1445 aa29.99■■■□□ 2.39
RFTN1-202ENST00000431547 KIAA0556O60303 1618 aa29.98■■■□□ 2.39
RFTN1-202ENST00000431547 RANGAP1P46060 587 aaPredicted RBP29.95■■■□□ 2.39
RFTN1-202ENST00000431547 SAMD9Q5K651 1589 aa29.9■■■□□ 2.38
RFTN1-202ENST00000431547 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
RFTN1-202ENST00000431547 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
RFTN1-202ENST00000431547 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
RFTN1-202ENST00000431547 EFCAB5A4FU69 1503 aa29.86■■■□□ 2.37
RFTN1-202ENST00000431547 UACAQ9BZF9 1416 aa29.79■■■□□ 2.36
RFTN1-202ENST00000431547 ARHGAP35Q9NRY4 1499 aa29.78■■■□□ 2.36
RFTN1-202ENST00000431547 FHOD3Q2V2M9 1422 aa29.77■■■□□ 2.36
RFTN1-202ENST00000431547 UHRF1BP1LA0JNW5 1464 aa29.74■■■□□ 2.35
RFTN1-202ENST00000431547 CLIP1P30622 1438 aa29.71■■■□□ 2.35
RFTN1-202ENST00000431547 ADCY10Q96PN6 1610 aa29.71■■■□□ 2.35
RFTN1-202ENST00000431547 NPM1P06748 294 aaKnown RBP eCLIP29.71■■■□□ 2.35
RFTN1-202ENST00000431547 PLB1Q6P1J6 1458 aa29.71■■■□□ 2.35
RFTN1-202ENST00000431547 ABCC2Q92887 1545 aa29.69■■■□□ 2.34
RFTN1-202ENST00000431547 ABCA8O94911 1581 aa29.67■■■□□ 2.34
RFTN1-202ENST00000431547 CEP162Q5TB80 1403 aa29.64■■■□□ 2.34
RFTN1-202ENST00000431547 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
RFTN1-202ENST00000431547 KDM5BQ9UGL1 1544 aa29.59■■■□□ 2.33
RFTN1-202ENST00000431547 RAPGEF6Q8TEU7 1601 aa29.54■■■□□ 2.32
RFTN1-202ENST00000431547 MAPKBP1O60336 1514 aa29.51■■■□□ 2.32
RFTN1-202ENST00000431547 NUP153P49790 1475 aaKnown RBP29.48■■■□□ 2.31
RFTN1-202ENST00000431547 ATP10BO94823 1461 aa29.48■■■□□ 2.31
RFTN1-202ENST00000431547 ARID3CA6NKF2 412 aa29.44■■■□□ 2.3
RFTN1-202ENST00000431547 ZCCHC11Q5TAX3 1644 aaKnown RBP29.44■■■□□ 2.3
RFTN1-202ENST00000431547 ASXL2Q76L83 1435 aa29.44■■■□□ 2.3
RFTN1-202ENST00000431547 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
RFTN1-202ENST00000431547 CASKIN1Q8WXD9 1431 aa29.42■■■□□ 2.3
RFTN1-202ENST00000431547 ATP1B4Q9UN42 357 aaPredicted RBP29.41■■■□□ 2.3
RFTN1-202ENST00000431547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.38■■■□□ 2.29
RFTN1-202ENST00000431547 HNRNPUL2Q1KMD3 747 aaKnown RBP29.38■■■□□ 2.29
RFTN1-202ENST00000431547 HECW1Q76N89 1606 aa29.36■■■□□ 2.29
RFTN1-202ENST00000431547 ABCC10Q5T3U5 1492 aa29.36■■■□□ 2.29
RFTN1-202ENST00000431547 FYCO1Q9BQS8 1478 aa29.34■■■□□ 2.29
RFTN1-202ENST00000431547 WDR7Q9Y4E6 1490 aa29.33■■■□□ 2.29
RFTN1-202ENST00000431547 EPRSP07814 1512 aaKnown RBP29.33■■■□□ 2.29
RFTN1-202ENST00000431547 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
RFTN1-202ENST00000431547 FAM69CQ0P6D2 419 aa29.31■■■□□ 2.28
RFTN1-202ENST00000431547 PLEKHD1A6NEE1 506 aa29.29■■■□□ 2.28
RFTN1-202ENST00000431547 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
RFTN1-202ENST00000431547 VPS8Q8N3P4 1428 aa29.28■■■□□ 2.28
RFTN1-202ENST00000431547 CDK11AQ9UQ88 783 aaPredicted RBP29.25■■■□□ 2.27
RFTN1-202ENST00000431547 DIP2BQ9P265 1576 aa29.25■■■□□ 2.27
RFTN1-202ENST00000431547 CCDC18Q5T9S5 1454 aa29.24■■■□□ 2.27
RFTN1-202ENST00000431547 KCNH8Q96L42 1107 aa29.24■■■□□ 2.27
RFTN1-202ENST00000431547 GLI2P10070 1586 aa29.21■■■□□ 2.27
RFTN1-202ENST00000431547 KIF13AQ9H1H9 1805 aa29.15■■■□□ 2.26
RFTN1-202ENST00000431547 LRRIQ1Q96JM4 1722 aa29.15■■■□□ 2.26
RFTN1-202ENST00000431547 TROQ12816 1431 aaPredicted RBP29.11■■■□□ 2.25
RFTN1-202ENST00000431547 CD109Q6YHK3 1445 aa29.05■■■□□ 2.24
RFTN1-202ENST00000431547 MAP3K4Q9Y6R4 1608 aa29.03■■■□□ 2.24
RFTN1-202ENST00000431547 MAGI3Q5TCQ9 1506 aa29.03■■■□□ 2.24
RFTN1-202ENST00000431547 ABCA9Q8IUA7 1624 aa29.02■■■□□ 2.24
RFTN1-202ENST00000431547 MAP3K1Q13233 1512 aa29■■■□□ 2.23
RFTN1-202ENST00000431547 MTUS2Q5JR59 1369 aa29■■■□□ 2.23
RFTN1-202ENST00000431547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.99■■■□□ 2.23
RFTN1-202ENST00000431547 CFAP43Q8NDM7 1665 aa28.99■■■□□ 2.23
RFTN1-202ENST00000431547 APLP2Q06481 763 aa28.98■■■□□ 2.23
RFTN1-202ENST00000431547 TIAM1Q13009 1591 aa28.97■■■□□ 2.23
RFTN1-202ENST00000431547 KIF14Q15058 1648 aa28.94■■■□□ 2.22
RFTN1-202ENST00000431547 TEX14Q8IWB6 1497 aa28.93■■■□□ 2.22
RFTN1-202ENST00000431547 EHBP1L1Q8N3D4 1523 aa28.9■■■□□ 2.22
RFTN1-202ENST00000431547 TTC37Q6PGP7 1564 aa28.9■■■□□ 2.22
RFTN1-202ENST00000431547 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
RFTN1-202ENST00000431547 PPRC1Q5VV67 1664 aaKnown RBP28.89■■■□□ 2.22
RFTN1-202ENST00000431547 KANK4Q5T7N3 995 aaPredicted RBP28.89■■■□□ 2.22
RFTN1-202ENST00000431547 PLCH2O75038 1416 aa28.88■■■□□ 2.21
RFTN1-202ENST00000431547 TSPOAP1O95153 1857 aa28.88■■■□□ 2.21
RFTN1-202ENST00000431547 PHLDB1Q86UU1 1377 aa28.83■■■□□ 2.21
RFTN1-202ENST00000431547 ARAP3Q8WWN8 1544 aa28.8■■■□□ 2.2
RFTN1-202ENST00000431547 NEO1Q92859 1461 aa28.8■■■□□ 2.2
RFTN1-202ENST00000431547 EFCAB2Q5VUJ9 269 aa28.79■■■□□ 2.2
RFTN1-202ENST00000431547 FANCAO15360 1455 aa28.78■■■□□ 2.2
RFTN1-202ENST00000431547 CCNB3Q8WWL7 1395 aa28.77■■■□□ 2.2
RFTN1-202ENST00000431547 NCOA2Q15596 1464 aa28.77■■■□□ 2.2
RFTN1-202ENST00000431547 GPATCH8Q9UKJ3 1502 aaKnown RBP28.76■■■□□ 2.19
RFTN1-202ENST00000431547 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
RFTN1-202ENST00000431547 AKNAQ7Z591 1439 aa28.73■■■□□ 2.19
RFTN1-202ENST00000431547 COL17A1Q9UMD9 1497 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms