RNA–Protein interactions for RNA: ENST00000431206.6

PSMD13-203, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2 BASIC

Gene PSMD13, Length 1,591 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-203ENST00000431206 CLIP1P30622 1438 aa23.92■■□□□ 1.42
PSMD13-203ENST00000431206 FBLN2P98095 1184 aa23.91■■□□□ 1.42
PSMD13-203ENST00000431206 CHD1O14646 1710 aa23.82■■□□□ 1.4
PSMD13-203ENST00000431206 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
PSMD13-203ENST00000431206 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
PSMD13-203ENST00000431206 NUP160Q12769 1436 aa23.79■■□□□ 1.4
PSMD13-203ENST00000431206 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
PSMD13-203ENST00000431206 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
PSMD13-203ENST00000431206 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
PSMD13-203ENST00000431206 EFCAB5A4FU69 1503 aa23.72■■□□□ 1.39
PSMD13-203ENST00000431206 SAMD9Q5K651 1589 aa23.68■■□□□ 1.38
PSMD13-203ENST00000431206 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
PSMD13-203ENST00000431206 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
PSMD13-203ENST00000431206 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
PSMD13-203ENST00000431206 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.38
PSMD13-203ENST00000431206 DISP1Q96F81 1524 aa23.57■■□□□ 1.36
PSMD13-203ENST00000431206 JPH4Q96JJ6 628 aa23.57■■□□□ 1.36
PSMD13-203ENST00000431206 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
PSMD13-203ENST00000431206 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
PSMD13-203ENST00000431206 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
PSMD13-203ENST00000431206 FMN1Q68DA7 1419 aa23.49■■□□□ 1.35
PSMD13-203ENST00000431206 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
PSMD13-203ENST00000431206 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
PSMD13-203ENST00000431206 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
PSMD13-203ENST00000431206 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
PSMD13-203ENST00000431206 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
PSMD13-203ENST00000431206 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
PSMD13-203ENST00000431206 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
PSMD13-203ENST00000431206 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
PSMD13-203ENST00000431206 APLP2Q06481 763 aa23.4■■□□□ 1.34
PSMD13-203ENST00000431206 ERCC6L2Q5T890 1561 aa23.38■■□□□ 1.33
PSMD13-203ENST00000431206 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
PSMD13-203ENST00000431206 HECW1Q76N89 1606 aa23.31■■□□□ 1.32
PSMD13-203ENST00000431206 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
PSMD13-203ENST00000431206 RAPGEF6Q8TEU7 1601 aa23.29■■□□□ 1.32
PSMD13-203ENST00000431206 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
PSMD13-203ENST00000431206 PTPRGP23470 1445 aa23.28■■□□□ 1.32
PSMD13-203ENST00000431206 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
PSMD13-203ENST00000431206 PLB1Q6P1J6 1458 aa23.27■■□□□ 1.32
PSMD13-203ENST00000431206 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
PSMD13-203ENST00000431206 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
PSMD13-203ENST00000431206 ABCA8O94911 1581 aa23.22■■□□□ 1.31
PSMD13-203ENST00000431206 NUP153P49790 1475 aaKnown RBP23.22■■□□□ 1.31
PSMD13-203ENST00000431206 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
PSMD13-203ENST00000431206 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
PSMD13-203ENST00000431206 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
PSMD13-203ENST00000431206 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
PSMD13-203ENST00000431206 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
PSMD13-203ENST00000431206 UACAQ9BZF9 1416 aa23.15■■□□□ 1.3
PSMD13-203ENST00000431206 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
PSMD13-203ENST00000431206 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
PSMD13-203ENST00000431206 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
PSMD13-203ENST00000431206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.09■■□□□ 1.29
PSMD13-203ENST00000431206 HNRNPUL2Q1KMD3 747 aaKnown RBP23.09■■□□□ 1.29
PSMD13-203ENST00000431206 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
PSMD13-203ENST00000431206 MAGI3Q5TCQ9 1506 aa23.09■■□□□ 1.29
PSMD13-203ENST00000431206 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
PSMD13-203ENST00000431206 ATP10BO94823 1461 aa23.06■■□□□ 1.28
PSMD13-203ENST00000431206 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
PSMD13-203ENST00000431206 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
PSMD13-203ENST00000431206 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
PSMD13-203ENST00000431206 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
PSMD13-203ENST00000431206 RIMBP3CA6NJZ7 1639 aa22.99■■□□□ 1.27
PSMD13-203ENST00000431206 RIMBP3BA6NNM3 1639 aa22.99■■□□□ 1.27
PSMD13-203ENST00000431206 RIMBP3Q9UFD9 1639 aa22.99■■□□□ 1.27
PSMD13-203ENST00000431206 SUPT6HQ7KZ85 1726 aaKnown RBP22.98■■□□□ 1.27
PSMD13-203ENST00000431206 NCOA2Q15596 1464 aa22.97■■□□□ 1.27
PSMD13-203ENST00000431206 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
PSMD13-203ENST00000431206 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
PSMD13-203ENST00000431206 KDM5BQ9UGL1 1544 aa22.95■■□□□ 1.26
PSMD13-203ENST00000431206 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
PSMD13-203ENST00000431206 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
PSMD13-203ENST00000431206 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
PSMD13-203ENST00000431206 KIF14Q15058 1648 aa22.88■■□□□ 1.25
PSMD13-203ENST00000431206 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
PSMD13-203ENST00000431206 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
PSMD13-203ENST00000431206 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
PSMD13-203ENST00000431206 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
PSMD13-203ENST00000431206 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
PSMD13-203ENST00000431206 ABCC10Q5T3U5 1492 aa22.78■■□□□ 1.24
PSMD13-203ENST00000431206 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
PSMD13-203ENST00000431206 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
PSMD13-203ENST00000431206 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
PSMD13-203ENST00000431206 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
PSMD13-203ENST00000431206 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
PSMD13-203ENST00000431206 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
PSMD13-203ENST00000431206 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
PSMD13-203ENST00000431206 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
PSMD13-203ENST00000431206 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.239e-11■■■□□ 17.3
PSMD13-203ENST00000431206 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
PSMD13-203ENST00000431206 CDC42BPAQ5VT25 1732 aa22.7■■□□□ 1.22
PSMD13-203ENST00000431206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.69■■□□□ 1.225e-6■■■□□ 14.8
PSMD13-203ENST00000431206 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
PSMD13-203ENST00000431206 ITGAEP38570 1179 aa22.67■■□□□ 1.22
PSMD13-203ENST00000431206 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
PSMD13-203ENST00000431206 PREX2Q70Z35 1606 aa22.65■■□□□ 1.22
PSMD13-203ENST00000431206 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
PSMD13-203ENST00000431206 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
PSMD13-203ENST00000431206 CAMSAP2Q08AD1 1489 aa22.62■■□□□ 1.21
PSMD13-203ENST00000431206 ZNF644Q9H582 1327 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 328.6 ms