RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 GRIN2AQ12879 1464 aa14.62□□□□□ -0.07
COL6A4P2-201ENST00000430317 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
COL6A4P2-201ENST00000430317 CHD1O14646 1710 aa14.59□□□□□ -0.07
COL6A4P2-201ENST00000430317 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
COL6A4P2-201ENST00000430317 FBLN2P98095 1184 aa14.55□□□□□ -0.08
COL6A4P2-201ENST00000430317 NUP160Q12769 1436 aa14.53□□□□□ -0.08
COL6A4P2-201ENST00000430317 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
COL6A4P2-201ENST00000430317 CTTNBP2Q8WZ74 1663 aa14.52□□□□□ -0.08
COL6A4P2-201ENST00000430317 CEP170Q5SW79 1584 aa14.49□□□□□ -0.09
COL6A4P2-201ENST00000430317 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
COL6A4P2-201ENST00000430317 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
COL6A4P2-201ENST00000430317 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
COL6A4P2-201ENST00000430317 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
COL6A4P2-201ENST00000430317 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
COL6A4P2-201ENST00000430317 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
COL6A4P2-201ENST00000430317 SHROOM2Q13796 1616 aa14.4□□□□□ -0.1
COL6A4P2-201ENST00000430317 EFCAB5A4FU69 1503 aa14.4□□□□□ -0.1
COL6A4P2-201ENST00000430317 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
COL6A4P2-201ENST00000430317 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
COL6A4P2-201ENST00000430317 CARMIL2Q6F5E8 1435 aa14.37□□□□□ -0.11
COL6A4P2-201ENST00000430317 CEP162Q5TB80 1403 aa14.33□□□□□ -0.11
COL6A4P2-201ENST00000430317 LOC105371045A0A1W2PR82 267 aa14.33□□□□□ -0.12
COL6A4P2-201ENST00000430317 JPH4Q96JJ6 628 aa14.33□□□□□ -0.12
COL6A4P2-201ENST00000430317 SAMD9Q5K651 1589 aa14.33□□□□□ -0.12
COL6A4P2-201ENST00000430317 CLIP1P30622 1438 aa14.32□□□□□ -0.12
COL6A4P2-201ENST00000430317 KIAA0556O60303 1618 aa14.32□□□□□ -0.12
COL6A4P2-201ENST00000430317 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
COL6A4P2-201ENST00000430317 DISP1Q96F81 1524 aa14.29□□□□□ -0.12
COL6A4P2-201ENST00000430317 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
COL6A4P2-201ENST00000430317 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
COL6A4P2-201ENST00000430317 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
COL6A4P2-201ENST00000430317 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
COL6A4P2-201ENST00000430317 FHOD3Q2V2M9 1422 aa14.21□□□□□ -0.13
COL6A4P2-201ENST00000430317 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 PTPRGP23470 1445 aa14.19□□□□□ -0.14
COL6A4P2-201ENST00000430317 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
COL6A4P2-201ENST00000430317 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
COL6A4P2-201ENST00000430317 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
COL6A4P2-201ENST00000430317 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
COL6A4P2-201ENST00000430317 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
COL6A4P2-201ENST00000430317 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
COL6A4P2-201ENST00000430317 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
COL6A4P2-201ENST00000430317 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
COL6A4P2-201ENST00000430317 ABCA8O94911 1581 aa14.12□□□□□ -0.15
COL6A4P2-201ENST00000430317 UHRF1BP1LA0JNW5 1464 aa14.12□□□□□ -0.15
COL6A4P2-201ENST00000430317 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
COL6A4P2-201ENST00000430317 PCF11O94913 1555 aaKnown RBP14.11□□□□□ -0.15
COL6A4P2-201ENST00000430317 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
COL6A4P2-201ENST00000430317 CCDC18Q5T9S5 1454 aa14.09□□□□□ -0.15
COL6A4P2-201ENST00000430317 PLB1Q6P1J6 1458 aa14.08□□□□□ -0.16
COL6A4P2-201ENST00000430317 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
COL6A4P2-201ENST00000430317 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
COL6A4P2-201ENST00000430317 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
COL6A4P2-201ENST00000430317 ADCY10Q96PN6 1610 aa14.04□□□□□ -0.16
COL6A4P2-201ENST00000430317 MAP3K1Q13233 1512 aa14.04□□□□□ -0.16
COL6A4P2-201ENST00000430317 APLP2Q06481 763 aa14.03□□□□□ -0.16
COL6A4P2-201ENST00000430317 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
COL6A4P2-201ENST00000430317 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.16
COL6A4P2-201ENST00000430317 EPRSP07814 1512 aaKnown RBP14.02□□□□□ -0.16
COL6A4P2-201ENST00000430317 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
COL6A4P2-201ENST00000430317 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL6A4P2-201ENST00000430317 ATP1B4Q9UN42 357 aaPredicted RBP14□□□□□ -0.17
COL6A4P2-201ENST00000430317 CDK11AQ9UQ88 783 aaPredicted RBP14□□□□□ -0.17
COL6A4P2-201ENST00000430317 ZCCHC11Q5TAX3 1644 aaKnown RBP13.99□□□□□ -0.17
COL6A4P2-201ENST00000430317 TIAM1Q13009 1591 aa13.99□□□□□ -0.17
COL6A4P2-201ENST00000430317 ATP10BO94823 1461 aa13.97□□□□□ -0.17
COL6A4P2-201ENST00000430317 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
COL6A4P2-201ENST00000430317 CDK13Q14004 1512 aaKnown RBP13.96□□□□□ -0.17
COL6A4P2-201ENST00000430317 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
COL6A4P2-201ENST00000430317 EHBP1L1Q8N3D4 1523 aa13.95□□□□□ -0.18
COL6A4P2-201ENST00000430317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
COL6A4P2-201ENST00000430317 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
COL6A4P2-201ENST00000430317 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
COL6A4P2-201ENST00000430317 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
COL6A4P2-201ENST00000430317 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
COL6A4P2-201ENST00000430317 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
COL6A4P2-201ENST00000430317 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
COL6A4P2-201ENST00000430317 KIF14Q15058 1648 aa13.9□□□□□ -0.18
COL6A4P2-201ENST00000430317 ASXL2Q76L83 1435 aa13.9□□□□□ -0.19
COL6A4P2-201ENST00000430317 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
COL6A4P2-201ENST00000430317 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
COL6A4P2-201ENST00000430317 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
COL6A4P2-201ENST00000430317 GLI2P10070 1586 aa13.82□□□□□ -0.2
COL6A4P2-201ENST00000430317 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
COL6A4P2-201ENST00000430317 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
COL6A4P2-201ENST00000430317 ABCA9Q8IUA7 1624 aa13.81□□□□□ -0.2
COL6A4P2-201ENST00000430317 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
COL6A4P2-201ENST00000430317 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
COL6A4P2-201ENST00000430317 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
COL6A4P2-201ENST00000430317 ARAP3Q8WWN8 1544 aa13.79□□□□□ -0.2
COL6A4P2-201ENST00000430317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL6A4P2-201ENST00000430317 MYO5CQ9NQX4 1742 aa13.78□□□□□ -0.2
COL6A4P2-201ENST00000430317 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
COL6A4P2-201ENST00000430317 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
COL6A4P2-201ENST00000430317 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
COL6A4P2-201ENST00000430317 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms