RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-202ENST00000430200 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-202ENST00000430200 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
HDAC4-202ENST00000430200 KIAA0586Q9BVV6 1533 aa20.63■□□□□ 0.89
HDAC4-202ENST00000430200 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
HDAC4-202ENST00000430200 IQGAP2Q13576 1575 aa20.58■□□□□ 0.88
HDAC4-202ENST00000430200 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
HDAC4-202ENST00000430200 CTTNBP2Q8WZ74 1663 aa20.54■□□□□ 0.88
HDAC4-202ENST00000430200 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
HDAC4-202ENST00000430200 MAPKBP1O60336 1514 aa20.5■□□□□ 0.87
HDAC4-202ENST00000430200 DISP1Q96F81 1524 aa20.47■□□□□ 0.87
HDAC4-202ENST00000430200 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
HDAC4-202ENST00000430200 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
HDAC4-202ENST00000430200 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
HDAC4-202ENST00000430200 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
HDAC4-202ENST00000430200 TSPOAP1O95153 1857 aa20.39■□□□□ 0.86
HDAC4-202ENST00000430200 ABCC2Q92887 1545 aa20.35■□□□□ 0.85
HDAC4-202ENST00000430200 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
HDAC4-202ENST00000430200 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
HDAC4-202ENST00000430200 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
HDAC4-202ENST00000430200 PTPRGP23470 1445 aa20.33■□□□□ 0.84
HDAC4-202ENST00000430200 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
HDAC4-202ENST00000430200 CARMIL2Q6F5E8 1435 aa20.32■□□□□ 0.84
HDAC4-202ENST00000430200 UHRF1BP1LA0JNW5 1464 aa20.29■□□□□ 0.84
HDAC4-202ENST00000430200 TTBK1Q5TCY1 1321 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-202ENST00000430200 UACAQ9BZF9 1416 aa20.24■□□□□ 0.83
HDAC4-202ENST00000430200 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
HDAC4-202ENST00000430200 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
HDAC4-202ENST00000430200 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
HDAC4-202ENST00000430200 KDM6BO15054 1643 aa20.22■□□□□ 0.83
HDAC4-202ENST00000430200 ABCA8O94911 1581 aa20.21■□□□□ 0.83
HDAC4-202ENST00000430200 MAP3K4Q9Y6R4 1608 aa20.21■□□□□ 0.83
HDAC4-202ENST00000430200 GLI2P10070 1586 aa20.21■□□□□ 0.83
HDAC4-202ENST00000430200 PLB1Q6P1J6 1458 aa20.2■□□□□ 0.82
HDAC4-202ENST00000430200 SAMD9Q5K651 1589 aa20.18■□□□□ 0.82
HDAC4-202ENST00000430200 NPM1P06748 294 aaKnown RBP eCLIP20.18■□□□□ 0.82
HDAC4-202ENST00000430200 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
HDAC4-202ENST00000430200 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
HDAC4-202ENST00000430200 KIF21BO75037 1637 aa20.08■□□□□ 0.8
HDAC4-202ENST00000430200 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
HDAC4-202ENST00000430200 CFAP43Q8NDM7 1665 aa20.04■□□□□ 0.8
HDAC4-202ENST00000430200 EEA1Q15075 1411 aa20.03■□□□□ 0.8
HDAC4-202ENST00000430200 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.8
HDAC4-202ENST00000430200 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
HDAC4-202ENST00000430200 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-202ENST00000430200 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
HDAC4-202ENST00000430200 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
HDAC4-202ENST00000430200 ATP10BO94823 1461 aa19.93■□□□□ 0.78
HDAC4-202ENST00000430200 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-202ENST00000430200 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
HDAC4-202ENST00000430200 ABCA9Q8IUA7 1624 aa19.92■□□□□ 0.78
HDAC4-202ENST00000430200 TEX14Q8IWB6 1497 aa19.92■□□□□ 0.78
HDAC4-202ENST00000430200 EFCAB5A4FU69 1503 aa19.89■□□□□ 0.77
HDAC4-202ENST00000430200 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
HDAC4-202ENST00000430200 MAGI3Q5TCQ9 1506 aa19.89■□□□□ 0.77
HDAC4-202ENST00000430200 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
HDAC4-202ENST00000430200 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
HDAC4-202ENST00000430200 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
HDAC4-202ENST00000430200 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
HDAC4-202ENST00000430200 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
HDAC4-202ENST00000430200 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
HDAC4-202ENST00000430200 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
HDAC4-202ENST00000430200 ADGRL1O94910 1474 aa19.8■□□□□ 0.76
HDAC4-202ENST00000430200 TTC37Q6PGP7 1564 aa19.79■□□□□ 0.76
HDAC4-202ENST00000430200 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
HDAC4-202ENST00000430200 CDK13Q14004 1512 aaKnown RBP19.79■□□□□ 0.76
HDAC4-202ENST00000430200 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
HDAC4-202ENST00000430200 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
HDAC4-202ENST00000430200 ARAP3Q8WWN8 1544 aa19.74■□□□□ 0.75
HDAC4-202ENST00000430200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC4-202ENST00000430200 RICTORQ6R327 1708 aa19.72■□□□□ 0.75
HDAC4-202ENST00000430200 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
HDAC4-202ENST00000430200 KIF14Q15058 1648 aa19.68■□□□□ 0.74
HDAC4-202ENST00000430200 PCF11O94913 1555 aaKnown RBP19.67■□□□□ 0.74
HDAC4-202ENST00000430200 SIGLEC1Q9BZZ2 1709 aa19.66■□□□□ 0.74
HDAC4-202ENST00000430200 NEO1Q92859 1461 aa19.65■□□□□ 0.74
HDAC4-202ENST00000430200 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.73
HDAC4-202ENST00000430200 MYO5CQ9NQX4 1742 aa19.64■□□□□ 0.73
HDAC4-202ENST00000430200 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
HDAC4-202ENST00000430200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-202ENST00000430200 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
HDAC4-202ENST00000430200 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
HDAC4-202ENST00000430200 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
HDAC4-202ENST00000430200 ADAMTSL3P82987 1691 aa19.59■□□□□ 0.73
HDAC4-202ENST00000430200 FANCAO15360 1455 aa19.57■□□□□ 0.72
HDAC4-202ENST00000430200 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
HDAC4-202ENST00000430200 ZMYM4Q5VZL5 1548 aa19.56■□□□□ 0.72
HDAC4-202ENST00000430200 HECW2Q9P2P5 1572 aa19.55■□□□□ 0.72
HDAC4-202ENST00000430200 CDC42BPBQ9Y5S2 1711 aa19.54■□□□□ 0.72
HDAC4-202ENST00000430200 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
HDAC4-202ENST00000430200 MADDQ8WXG6 1647 aa19.53■□□□□ 0.72
HDAC4-202ENST00000430200 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
HDAC4-202ENST00000430200 AKNAQ7Z591 1439 aa19.51■□□□□ 0.71
HDAC4-202ENST00000430200 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
HDAC4-202ENST00000430200 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
HDAC4-202ENST00000430200 PLEKHD1A6NEE1 506 aa19.49■□□□□ 0.71
HDAC4-202ENST00000430200 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-202ENST00000430200 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
HDAC4-202ENST00000430200 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
HDAC4-202ENST00000430200 CASKIN1Q8WXD9 1431 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms