RNA–Protein interactions for RNA: ENST00000430192.5

LINC00299-201, long intergenic non-protein coding RNA 299, humanhuman

TSL 1 (best) BASIC

Gene LINC00299, Length 1,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-201ENST00000430192 KIAA0586Q9BVV6 1533 aa12.36□□□□□ -0.43
LINC00299-201ENST00000430192 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
LINC00299-201ENST00000430192 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
LINC00299-201ENST00000430192 CHD1O14646 1710 aa12.33□□□□□ -0.44
LINC00299-201ENST00000430192 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
LINC00299-201ENST00000430192 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
LINC00299-201ENST00000430192 CLIP1P30622 1438 aa12.32□□□□□ -0.44
LINC00299-201ENST00000430192 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
LINC00299-201ENST00000430192 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
LINC00299-201ENST00000430192 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
LINC00299-201ENST00000430192 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
LINC00299-201ENST00000430192 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
LINC00299-201ENST00000430192 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
LINC00299-201ENST00000430192 ARHGAP35Q9NRY4 1499 aa12.24□□□□□ -0.45
LINC00299-201ENST00000430192 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
LINC00299-201ENST00000430192 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
LINC00299-201ENST00000430192 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
LINC00299-201ENST00000430192 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
LINC00299-201ENST00000430192 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
LINC00299-201ENST00000430192 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
LINC00299-201ENST00000430192 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
LINC00299-201ENST00000430192 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
LINC00299-201ENST00000430192 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
LINC00299-201ENST00000430192 HRCP23327 699 aa12.19□□□□□ -0.46
LINC00299-201ENST00000430192 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
LINC00299-201ENST00000430192 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
LINC00299-201ENST00000430192 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
LINC00299-201ENST00000430192 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
LINC00299-201ENST00000430192 PTPRGP23470 1445 aa12.11□□□□□ -0.47
LINC00299-201ENST00000430192 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
LINC00299-201ENST00000430192 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
LINC00299-201ENST00000430192 APLP2Q06481 763 aa12.1□□□□□ -0.47
LINC00299-201ENST00000430192 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
LINC00299-201ENST00000430192 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
LINC00299-201ENST00000430192 PCF11O94913 1555 aaKnown RBP12.07□□□□□ -0.48
LINC00299-201ENST00000430192 HECW1Q76N89 1606 aa12.05□□□□□ -0.48
LINC00299-201ENST00000430192 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
LINC00299-201ENST00000430192 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
LINC00299-201ENST00000430192 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
LINC00299-201ENST00000430192 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
LINC00299-201ENST00000430192 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
LINC00299-201ENST00000430192 RAPGEF6Q8TEU7 1601 aa12.04□□□□□ -0.48
LINC00299-201ENST00000430192 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
LINC00299-201ENST00000430192 ABCA8O94911 1581 aa12.03□□□□□ -0.48
LINC00299-201ENST00000430192 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
LINC00299-201ENST00000430192 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
LINC00299-201ENST00000430192 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
LINC00299-201ENST00000430192 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
LINC00299-201ENST00000430192 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
LINC00299-201ENST00000430192 CDK11AQ9UQ88 783 aaPredicted RBP11.98□□□□□ -0.49
LINC00299-201ENST00000430192 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
LINC00299-201ENST00000430192 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
LINC00299-201ENST00000430192 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
LINC00299-201ENST00000430192 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.49
LINC00299-201ENST00000430192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
LINC00299-201ENST00000430192 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
LINC00299-201ENST00000430192 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
LINC00299-201ENST00000430192 ATP10BO94823 1461 aa11.95□□□□□ -0.5
LINC00299-201ENST00000430192 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
LINC00299-201ENST00000430192 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
LINC00299-201ENST00000430192 KDM5BQ9UGL1 1544 aa11.94□□□□□ -0.5
LINC00299-201ENST00000430192 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
LINC00299-201ENST00000430192 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00299-201ENST00000430192 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
LINC00299-201ENST00000430192 EHBP1L1Q8N3D4 1523 aa11.92□□□□□ -0.5
LINC00299-201ENST00000430192 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
LINC00299-201ENST00000430192 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
LINC00299-201ENST00000430192 PLEKHD1A6NEE1 506 aa11.91□□□□□ -0.5
LINC00299-201ENST00000430192 LRRIQ1Q96JM4 1722 aa11.9□□□□□ -0.5
LINC00299-201ENST00000430192 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
LINC00299-201ENST00000430192 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
LINC00299-201ENST00000430192 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
LINC00299-201ENST00000430192 MYT1Q01538 1121 aa11.88□□□□□ -0.51
LINC00299-201ENST00000430192 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
LINC00299-201ENST00000430192 MAGI3Q5TCQ9 1506 aa11.87□□□□□ -0.51
LINC00299-201ENST00000430192 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
LINC00299-201ENST00000430192 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
LINC00299-201ENST00000430192 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
LINC00299-201ENST00000430192 KIF14Q15058 1648 aa11.84□□□□□ -0.51
LINC00299-201ENST00000430192 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
LINC00299-201ENST00000430192 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
LINC00299-201ENST00000430192 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
LINC00299-201ENST00000430192 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
LINC00299-201ENST00000430192 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
LINC00299-201ENST00000430192 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
LINC00299-201ENST00000430192 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
LINC00299-201ENST00000430192 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
LINC00299-201ENST00000430192 MIA2Q96PC5 1412 aa11.77□□□□□ -0.52
LINC00299-201ENST00000430192 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
LINC00299-201ENST00000430192 FGD6Q6ZV73 1430 aa11.76□□□□□ -0.53
LINC00299-201ENST00000430192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00299-201ENST00000430192 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
LINC00299-201ENST00000430192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00299-201ENST00000430192 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
LINC00299-201ENST00000430192 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
LINC00299-201ENST00000430192 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
LINC00299-201ENST00000430192 ABCA9Q8IUA7 1624 aa11.72□□□□□ -0.53
LINC00299-201ENST00000430192 ARAP3Q8WWN8 1544 aa11.72□□□□□ -0.53
LINC00299-201ENST00000430192 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
LINC00299-201ENST00000430192 PLCH2O75038 1416 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms