RNA–Protein interactions for RNA: ENST00000429927.6

CDKL2-202, Transcript of cyclin dependent kinase like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKL2, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2-202ENST00000429927 CUX1P39880 1505 aa16.56■□□□□ 0.24
CDKL2-202ENST00000429927 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
CDKL2-202ENST00000429927 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
CDKL2-202ENST00000429927 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
CDKL2-202ENST00000429927 IGF1RP08069 1367 aa16.54■□□□□ 0.24
CDKL2-202ENST00000429927 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
CDKL2-202ENST00000429927 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
CDKL2-202ENST00000429927 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
CDKL2-202ENST00000429927 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CDKL2-202ENST00000429927 FKBP8Q14318 412 aa16.47■□□□□ 0.23
CDKL2-202ENST00000429927 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
CDKL2-202ENST00000429927 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
CDKL2-202ENST00000429927 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
CDKL2-202ENST00000429927 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
CDKL2-202ENST00000429927 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
CDKL2-202ENST00000429927 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
CDKL2-202ENST00000429927 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
CDKL2-202ENST00000429927 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
CDKL2-202ENST00000429927 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
CDKL2-202ENST00000429927 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
CDKL2-202ENST00000429927 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
CDKL2-202ENST00000429927 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CDKL2-202ENST00000429927 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
CDKL2-202ENST00000429927 CFTRP13569 1480 aa16.3■□□□□ 0.2
CDKL2-202ENST00000429927 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
CDKL2-202ENST00000429927 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDKL2-202ENST00000429927 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
CDKL2-202ENST00000429927 ANP32CO43423 234 aa16.28■□□□□ 0.2
CDKL2-202ENST00000429927 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
CDKL2-202ENST00000429927 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.2
CDKL2-202ENST00000429927 CCDC184Q52MB2 194 aa16.27■□□□□ 0.19
CDKL2-202ENST00000429927 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
CDKL2-202ENST00000429927 KDM2AQ9Y2K7 1162 aa16.25■□□□□ 0.19
CDKL2-202ENST00000429927 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
CDKL2-202ENST00000429927 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
CDKL2-202ENST00000429927 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
CDKL2-202ENST00000429927 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDKL2-202ENST00000429927 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
CDKL2-202ENST00000429927 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
CDKL2-202ENST00000429927 NEFLP07196 543 aa16.17■□□□□ 0.18
CDKL2-202ENST00000429927 RRBP1Q9P2E9 1410 aaKnown RBP16.17■□□□□ 0.18
CDKL2-202ENST00000429927 LRRC9Q6ZRR7 1453 aa16.17■□□□□ 0.18
CDKL2-202ENST00000429927 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
CDKL2-202ENST00000429927 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
CDKL2-202ENST00000429927 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
CDKL2-202ENST00000429927 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
CDKL2-202ENST00000429927 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
CDKL2-202ENST00000429927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDKL2-202ENST00000429927 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
CDKL2-202ENST00000429927 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
CDKL2-202ENST00000429927 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
CDKL2-202ENST00000429927 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
CDKL2-202ENST00000429927 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
CDKL2-202ENST00000429927 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
CDKL2-202ENST00000429927 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
CDKL2-202ENST00000429927 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
CDKL2-202ENST00000429927 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
CDKL2-202ENST00000429927 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
CDKL2-202ENST00000429927 NBPF8Q3BBV2 869 aa16.04■□□□□ 0.16
CDKL2-202ENST00000429927 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
CDKL2-202ENST00000429927 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
CDKL2-202ENST00000429927 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
CDKL2-202ENST00000429927 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
CDKL2-202ENST00000429927 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
CDKL2-202ENST00000429927 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
CDKL2-202ENST00000429927 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
CDKL2-202ENST00000429927 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
CDKL2-202ENST00000429927 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
CDKL2-202ENST00000429927 CFDP1Q9UEE9 299 aaPredicted RBP15.98■□□□□ 0.15
CDKL2-202ENST00000429927 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
CDKL2-202ENST00000429927 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDKL2-202ENST00000429927 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
CDKL2-202ENST00000429927 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
CDKL2-202ENST00000429927 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
CDKL2-202ENST00000429927 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDKL2-202ENST00000429927 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
CDKL2-202ENST00000429927 PKD2Q13563 968 aa15.93■□□□□ 0.14
CDKL2-202ENST00000429927 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
CDKL2-202ENST00000429927 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
CDKL2-202ENST00000429927 NAIPQ13075 1403 aa15.88■□□□□ 0.13
CDKL2-202ENST00000429927 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
CDKL2-202ENST00000429927 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
CDKL2-202ENST00000429927 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
CDKL2-202ENST00000429927 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
CDKL2-202ENST00000429927 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
CDKL2-202ENST00000429927 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
CDKL2-202ENST00000429927 CCDC136Q96JN2 1154 aa15.82■□□□□ 0.12
CDKL2-202ENST00000429927 CC2D1BQ5T0F9 858 aaKnown RBP15.81■□□□□ 0.12
CDKL2-202ENST00000429927 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
CDKL2-202ENST00000429927 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
CDKL2-202ENST00000429927 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
CDKL2-202ENST00000429927 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
CDKL2-202ENST00000429927 CARD11Q9BXL7 1154 aa15.8■□□□□ 0.12
CDKL2-202ENST00000429927 NBR1Q14596 966 aa15.8■□□□□ 0.12
CDKL2-202ENST00000429927 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
CDKL2-202ENST00000429927 KIF7Q2M1P5 1343 aa15.78■□□□□ 0.12
CDKL2-202ENST00000429927 KDM6BO15054 1643 aa15.78■□□□□ 0.12
CDKL2-202ENST00000429927 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
CDKL2-202ENST00000429927 PLEKHD1A6NEE1 506 aa15.77■□□□□ 0.12
CDKL2-202ENST00000429927 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms