RNA–Protein interactions for RNA: ENST00000429907.5

RPE-205, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-205ENST00000429907 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
RPE-205ENST00000429907 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
RPE-205ENST00000429907 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
RPE-205ENST00000429907 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
RPE-205ENST00000429907 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
RPE-205ENST00000429907 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
RPE-205ENST00000429907 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
RPE-205ENST00000429907 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
RPE-205ENST00000429907 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
RPE-205ENST00000429907 CLASP1Q7Z460 1538 aa13.63□□□□□ -0.23
RPE-205ENST00000429907 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
RPE-205ENST00000429907 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
RPE-205ENST00000429907 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
RPE-205ENST00000429907 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
RPE-205ENST00000429907 ZBTB22O15209 634 aa13.56□□□□□ -0.24
RPE-205ENST00000429907 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
RPE-205ENST00000429907 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
RPE-205ENST00000429907 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
RPE-205ENST00000429907 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
RPE-205ENST00000429907 CUL7Q14999 1698 aa13.51□□□□□ -0.25
RPE-205ENST00000429907 FHAD1B1AJZ9 1412 aa13.48□□□□□ -0.25
RPE-205ENST00000429907 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
RPE-205ENST00000429907 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
RPE-205ENST00000429907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
RPE-205ENST00000429907 SHROOM2Q13796 1616 aa13.43□□□□□ -0.26
RPE-205ENST00000429907 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
RPE-205ENST00000429907 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
RPE-205ENST00000429907 NUP160Q12769 1436 aa13.4□□□□□ -0.26
RPE-205ENST00000429907 CTTNBP2Q8WZ74 1663 aa13.37□□□□□ -0.27
RPE-205ENST00000429907 IGF1RP08069 1367 aa13.34□□□□□ -0.27
RPE-205ENST00000429907 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
RPE-205ENST00000429907 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
RPE-205ENST00000429907 KIF13AQ9H1H9 1805 aa13.29□□□□□ -0.28
RPE-205ENST00000429907 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
RPE-205ENST00000429907 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
RPE-205ENST00000429907 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
RPE-205ENST00000429907 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
RPE-205ENST00000429907 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
RPE-205ENST00000429907 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
RPE-205ENST00000429907 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
RPE-205ENST00000429907 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
RPE-205ENST00000429907 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
RPE-205ENST00000429907 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
RPE-205ENST00000429907 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
RPE-205ENST00000429907 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
RPE-205ENST00000429907 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
RPE-205ENST00000429907 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
RPE-205ENST00000429907 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
RPE-205ENST00000429907 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
RPE-205ENST00000429907 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
RPE-205ENST00000429907 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
RPE-205ENST00000429907 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
RPE-205ENST00000429907 PTPRGP23470 1445 aa13.1□□□□□ -0.31
RPE-205ENST00000429907 EEA1Q15075 1411 aa13.1□□□□□ -0.31
RPE-205ENST00000429907 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
RPE-205ENST00000429907 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPE-205ENST00000429907 KDM6BO15054 1643 aa13.09□□□□□ -0.31
RPE-205ENST00000429907 KIF21BO75037 1637 aa13.09□□□□□ -0.31
RPE-205ENST00000429907 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.31
RPE-205ENST00000429907 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
RPE-205ENST00000429907 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
RPE-205ENST00000429907 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
RPE-205ENST00000429907 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
RPE-205ENST00000429907 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
RPE-205ENST00000429907 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.33
RPE-205ENST00000429907 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
RPE-205ENST00000429907 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
RPE-205ENST00000429907 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
RPE-205ENST00000429907 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
RPE-205ENST00000429907 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
RPE-205ENST00000429907 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
RPE-205ENST00000429907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
RPE-205ENST00000429907 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
RPE-205ENST00000429907 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
RPE-205ENST00000429907 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
RPE-205ENST00000429907 ABCA8O94911 1581 aa12.98□□□□□ -0.33
RPE-205ENST00000429907 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
RPE-205ENST00000429907 ASXL2Q76L83 1435 aa12.96□□□□□ -0.33
RPE-205ENST00000429907 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
RPE-205ENST00000429907 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
RPE-205ENST00000429907 MAP3K4Q9Y6R4 1608 aa12.93□□□□□ -0.34
RPE-205ENST00000429907 UBTFP17480 764 aaKnown RBP12.92□□□□□ -0.34
RPE-205ENST00000429907 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
RPE-205ENST00000429907 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
RPE-205ENST00000429907 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
RPE-205ENST00000429907 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
RPE-205ENST00000429907 CFAP43Q8NDM7 1665 aa12.9□□□□□ -0.34
RPE-205ENST00000429907 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
RPE-205ENST00000429907 ADGRL1O94910 1474 aa12.9□□□□□ -0.34
RPE-205ENST00000429907 GLI2P10070 1586 aa12.9□□□□□ -0.35
RPE-205ENST00000429907 WDR7Q9Y4E6 1490 aa12.88□□□□□ -0.35
RPE-205ENST00000429907 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
RPE-205ENST00000429907 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
RPE-205ENST00000429907 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
RPE-205ENST00000429907 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
RPE-205ENST00000429907 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
RPE-205ENST00000429907 CAPN15O75808 1086 aa12.82□□□□□ -0.36
RPE-205ENST00000429907 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
RPE-205ENST00000429907 ATP10BO94823 1461 aa12.82□□□□□ -0.36
RPE-205ENST00000429907 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms