RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ERICH6Q7L0X2 663 aa13.74□□□□□ -0.21
NUP98-207ENST00000429801 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
NUP98-207ENST00000429801 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
NUP98-207ENST00000429801 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
NUP98-207ENST00000429801 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
NUP98-207ENST00000429801 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
NUP98-207ENST00000429801 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
NUP98-207ENST00000429801 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
NUP98-207ENST00000429801 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
NUP98-207ENST00000429801 FBLN2P98095 1184 aa13.61□□□□□ -0.23
NUP98-207ENST00000429801 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
NUP98-207ENST00000429801 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.23
NUP98-207ENST00000429801 CLIP1P30622 1438 aa13.56□□□□□ -0.24
NUP98-207ENST00000429801 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
NUP98-207ENST00000429801 NUP160Q12769 1436 aa13.54□□□□□ -0.24
NUP98-207ENST00000429801 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
NUP98-207ENST00000429801 CHD1O14646 1710 aa13.53□□□□□ -0.24
NUP98-207ENST00000429801 IQGAP2Q13576 1575 aa13.52□□□□□ -0.24
NUP98-207ENST00000429801 CEP170Q5SW79 1584 aa13.52□□□□□ -0.24
NUP98-207ENST00000429801 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
NUP98-207ENST00000429801 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
NUP98-207ENST00000429801 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
NUP98-207ENST00000429801 SAMD9Q5K651 1589 aa13.44□□□□□ -0.26
NUP98-207ENST00000429801 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
NUP98-207ENST00000429801 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
NUP98-207ENST00000429801 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
NUP98-207ENST00000429801 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
NUP98-207ENST00000429801 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
NUP98-207ENST00000429801 CLASP1Q7Z460 1538 aa13.4□□□□□ -0.26
NUP98-207ENST00000429801 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
NUP98-207ENST00000429801 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.26
NUP98-207ENST00000429801 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
NUP98-207ENST00000429801 KIAA0556O60303 1618 aa13.38□□□□□ -0.27
NUP98-207ENST00000429801 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
NUP98-207ENST00000429801 SHROOM2Q13796 1616 aa13.37□□□□□ -0.27
NUP98-207ENST00000429801 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
NUP98-207ENST00000429801 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
NUP98-207ENST00000429801 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
NUP98-207ENST00000429801 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
NUP98-207ENST00000429801 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
NUP98-207ENST00000429801 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
NUP98-207ENST00000429801 PTPRGP23470 1445 aa13.26□□□□□ -0.29
NUP98-207ENST00000429801 ERCC6L2Q5T890 1561 aa13.25□□□□□ -0.29
NUP98-207ENST00000429801 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
NUP98-207ENST00000429801 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
NUP98-207ENST00000429801 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
NUP98-207ENST00000429801 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
NUP98-207ENST00000429801 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
NUP98-207ENST00000429801 PLB1Q6P1J6 1458 aa13.21□□□□□ -0.29
NUP98-207ENST00000429801 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
NUP98-207ENST00000429801 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.3
NUP98-207ENST00000429801 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
NUP98-207ENST00000429801 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
NUP98-207ENST00000429801 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
NUP98-207ENST00000429801 ABCA8O94911 1581 aa13.2□□□□□ -0.3
NUP98-207ENST00000429801 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
NUP98-207ENST00000429801 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
NUP98-207ENST00000429801 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
NUP98-207ENST00000429801 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
NUP98-207ENST00000429801 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
NUP98-207ENST00000429801 KANK4Q5T7N3 995 aaPredicted RBP13.16□□□□□ -0.3
NUP98-207ENST00000429801 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
NUP98-207ENST00000429801 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
NUP98-207ENST00000429801 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.3
NUP98-207ENST00000429801 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
NUP98-207ENST00000429801 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
NUP98-207ENST00000429801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
NUP98-207ENST00000429801 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
NUP98-207ENST00000429801 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
NUP98-207ENST00000429801 CDK11AQ9UQ88 783 aaPredicted RBP13.13□□□□□ -0.31
NUP98-207ENST00000429801 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
NUP98-207ENST00000429801 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
NUP98-207ENST00000429801 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
NUP98-207ENST00000429801 ATP10BO94823 1461 aa13.11□□□□□ -0.31
NUP98-207ENST00000429801 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
NUP98-207ENST00000429801 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
NUP98-207ENST00000429801 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
NUP98-207ENST00000429801 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
NUP98-207ENST00000429801 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
NUP98-207ENST00000429801 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
NUP98-207ENST00000429801 EIF5BO60841 1220 aaKnown RBP13.08□□□□□ -0.32
NUP98-207ENST00000429801 ANP32EQ9BTT0 268 aa13.08□□□□□ -0.32
NUP98-207ENST00000429801 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
NUP98-207ENST00000429801 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
NUP98-207ENST00000429801 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
NUP98-207ENST00000429801 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
NUP98-207ENST00000429801 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
NUP98-207ENST00000429801 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
NUP98-207ENST00000429801 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
NUP98-207ENST00000429801 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
NUP98-207ENST00000429801 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
NUP98-207ENST00000429801 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUP98-207ENST00000429801 NCOA2Q15596 1464 aa13.02□□□□□ -0.32
NUP98-207ENST00000429801 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
NUP98-207ENST00000429801 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
NUP98-207ENST00000429801 KIF14Q15058 1648 aa12.98□□□□□ -0.33
NUP98-207ENST00000429801 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
NUP98-207ENST00000429801 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
NUP98-207ENST00000429801 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
NUP98-207ENST00000429801 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms