RNA–Protein interactions for RNA: ENST00000429644.6

GBE1-201, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GBE1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-201ENST00000429644 TONSLQ96HA7 1378 aa17.27■□□□□ 0.36
GBE1-201ENST00000429644 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
GBE1-201ENST00000429644 FHOD3Q2V2M9 1422 aa17.27■□□□□ 0.35
GBE1-201ENST00000429644 FBLN2P98095 1184 aa17.26■□□□□ 0.35
GBE1-201ENST00000429644 CUX1P39880 1505 aa17.26■□□□□ 0.35
GBE1-201ENST00000429644 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
GBE1-201ENST00000429644 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
GBE1-201ENST00000429644 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
GBE1-201ENST00000429644 FOXD1Q16676 465 aa17.23■□□□□ 0.35
GBE1-201ENST00000429644 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
GBE1-201ENST00000429644 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
GBE1-201ENST00000429644 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
GBE1-201ENST00000429644 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.35
GBE1-201ENST00000429644 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
GBE1-201ENST00000429644 TOP2BQ02880 1626 aa17.2■□□□□ 0.34
GBE1-201ENST00000429644 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
GBE1-201ENST00000429644 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
GBE1-201ENST00000429644 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
GBE1-201ENST00000429644 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
GBE1-201ENST00000429644 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
GBE1-201ENST00000429644 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
GBE1-201ENST00000429644 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
GBE1-201ENST00000429644 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
GBE1-201ENST00000429644 CFTRP13569 1480 aa17.09■□□□□ 0.33
GBE1-201ENST00000429644 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
GBE1-201ENST00000429644 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
GBE1-201ENST00000429644 MYT1Q01538 1121 aa17.07■□□□□ 0.32
GBE1-201ENST00000429644 NESP48681 1621 aa17.06■□□□□ 0.32
GBE1-201ENST00000429644 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
GBE1-201ENST00000429644 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
GBE1-201ENST00000429644 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
GBE1-201ENST00000429644 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
GBE1-201ENST00000429644 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
GBE1-201ENST00000429644 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
GBE1-201ENST00000429644 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
GBE1-201ENST00000429644 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
GBE1-201ENST00000429644 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
GBE1-201ENST00000429644 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
GBE1-201ENST00000429644 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
GBE1-201ENST00000429644 EIF4G2P78344 907 aaKnown RBP eCLIP16.95■□□□□ 0.3
GBE1-201ENST00000429644 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
GBE1-201ENST00000429644 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
GBE1-201ENST00000429644 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
GBE1-201ENST00000429644 TIAM1Q13009 1591 aa16.89■□□□□ 0.29
GBE1-201ENST00000429644 CDK11AQ9UQ88 783 aaPredicted RBP16.89■□□□□ 0.29
GBE1-201ENST00000429644 HMGXB3Q12766 1538 aa16.88■□□□□ 0.29
GBE1-201ENST00000429644 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
GBE1-201ENST00000429644 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
GBE1-201ENST00000429644 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
GBE1-201ENST00000429644 B4GALNT3Q6L9W6 998 aa16.85■□□□□ 0.29
GBE1-201ENST00000429644 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
GBE1-201ENST00000429644 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
GBE1-201ENST00000429644 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
GBE1-201ENST00000429644 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
GBE1-201ENST00000429644 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
GBE1-201ENST00000429644 CHMP7Q8WUX9 453 aaPredicted RBP16.83■□□□□ 0.28
GBE1-201ENST00000429644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.281e-6■■■□□ 16.4
GBE1-201ENST00000429644 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
GBE1-201ENST00000429644 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
GBE1-201ENST00000429644 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
GBE1-201ENST00000429644 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
GBE1-201ENST00000429644 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
GBE1-201ENST00000429644 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
GBE1-201ENST00000429644 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
GBE1-201ENST00000429644 ANP32EQ9BTT0 268 aa16.79■□□□□ 0.28
GBE1-201ENST00000429644 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
GBE1-201ENST00000429644 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
GBE1-201ENST00000429644 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
GBE1-201ENST00000429644 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
GBE1-201ENST00000429644 C11orf95C9JLR9 678 aaPredicted RBP16.76■□□□□ 0.27
GBE1-201ENST00000429644 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
GBE1-201ENST00000429644 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
GBE1-201ENST00000429644 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
GBE1-201ENST00000429644 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
GBE1-201ENST00000429644 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
GBE1-201ENST00000429644 PKD2Q13563 968 aa16.72■□□□□ 0.27
GBE1-201ENST00000429644 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
GBE1-201ENST00000429644 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
GBE1-201ENST00000429644 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
GBE1-201ENST00000429644 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
GBE1-201ENST00000429644 NAIPQ13075 1403 aa16.68■□□□□ 0.26
GBE1-201ENST00000429644 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
GBE1-201ENST00000429644 NBR1Q14596 966 aa16.66■□□□□ 0.26
GBE1-201ENST00000429644 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
GBE1-201ENST00000429644 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
GBE1-201ENST00000429644 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
GBE1-201ENST00000429644 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
GBE1-201ENST00000429644 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
GBE1-201ENST00000429644 DCAF11Q8TEB1 546 aa16.65■□□□□ 0.26
GBE1-201ENST00000429644 CCDC136Q96JN2 1154 aa16.65■□□□□ 0.26
GBE1-201ENST00000429644 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
GBE1-201ENST00000429644 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
GBE1-201ENST00000429644 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
GBE1-201ENST00000429644 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
GBE1-201ENST00000429644 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.254e-8■■■■■ 27.4
GBE1-201ENST00000429644 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
GBE1-201ENST00000429644 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
GBE1-201ENST00000429644 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.25
GBE1-201ENST00000429644 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
GBE1-201ENST00000429644 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms