RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
LINC00887-203ENST00000429578 EHMT2Q96KQ7 1210 aa27.79■■■□□ 2.04
LINC00887-203ENST00000429578 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
LINC00887-203ENST00000429578 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
LINC00887-203ENST00000429578 CLASP1Q7Z460 1538 aa27.75■■■□□ 2.03
LINC00887-203ENST00000429578 CTTNBP2Q8WZ74 1663 aa27.73■■■□□ 2.03
LINC00887-203ENST00000429578 ARAP1Q96P48 1450 aa27.7■■■□□ 2.03
LINC00887-203ENST00000429578 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.03
LINC00887-203ENST00000429578 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
LINC00887-203ENST00000429578 CEP170Q5SW79 1584 aa27.64■■■□□ 2.02
LINC00887-203ENST00000429578 NUP160Q12769 1436 aa27.62■■■□□ 2.01
LINC00887-203ENST00000429578 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
LINC00887-203ENST00000429578 IQGAP2Q13576 1575 aa27.54■■■□□ 2
LINC00887-203ENST00000429578 CEP162Q5TB80 1403 aa27.44■■□□□ 1.98
LINC00887-203ENST00000429578 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
LINC00887-203ENST00000429578 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
LINC00887-203ENST00000429578 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
LINC00887-203ENST00000429578 CLIP1P30622 1438 aa27.37■■□□□ 1.97
LINC00887-203ENST00000429578 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
LINC00887-203ENST00000429578 SAMD9Q5K651 1589 aa27.35■■□□□ 1.97
LINC00887-203ENST00000429578 EFCAB5A4FU69 1503 aa27.34■■□□□ 1.97
LINC00887-203ENST00000429578 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
LINC00887-203ENST00000429578 JPH4Q96JJ6 628 aa27.33■■□□□ 1.96
LINC00887-203ENST00000429578 ARHGAP35Q9NRY4 1499 aa27.31■■□□□ 1.96
LINC00887-203ENST00000429578 KIAA0556O60303 1618 aa27.27■■□□□ 1.96
LINC00887-203ENST00000429578 DISP1Q96F81 1524 aa27.26■■□□□ 1.96
LINC00887-203ENST00000429578 PRG4Q92954 1404 aaPredicted RBP27.22■■□□□ 1.95
LINC00887-203ENST00000429578 CARMIL2Q6F5E8 1435 aa27.21■■□□□ 1.95
LINC00887-203ENST00000429578 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
LINC00887-203ENST00000429578 FHOD3Q2V2M9 1422 aa27.16■■□□□ 1.94
LINC00887-203ENST00000429578 FMN1Q68DA7 1419 aa27.06■■□□□ 1.92
LINC00887-203ENST00000429578 VPS8Q8N3P4 1428 aa27.06■■□□□ 1.92
LINC00887-203ENST00000429578 PTPRGP23470 1445 aa26.98■■□□□ 1.91
LINC00887-203ENST00000429578 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
LINC00887-203ENST00000429578 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
LINC00887-203ENST00000429578 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
LINC00887-203ENST00000429578 CASKIN1Q8WXD9 1431 aa26.93■■□□□ 1.9
LINC00887-203ENST00000429578 FYCO1Q9BQS8 1478 aa26.92■■□□□ 1.9
LINC00887-203ENST00000429578 ABCA8O94911 1581 aa26.91■■□□□ 1.9
LINC00887-203ENST00000429578 NPM1P06748 294 aaKnown RBP eCLIP26.9■■□□□ 1.9
LINC00887-203ENST00000429578 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
LINC00887-203ENST00000429578 HECW1Q76N89 1606 aa26.89■■□□□ 1.89
LINC00887-203ENST00000429578 LRRIQ1Q96JM4 1722 aa26.88■■□□□ 1.89
LINC00887-203ENST00000429578 ADCY10Q96PN6 1610 aa26.85■■□□□ 1.89
LINC00887-203ENST00000429578 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
LINC00887-203ENST00000429578 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
LINC00887-203ENST00000429578 NUP153P49790 1475 aaKnown RBP26.8■■□□□ 1.88
LINC00887-203ENST00000429578 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
LINC00887-203ENST00000429578 UHRF1BP1LA0JNW5 1464 aa26.78■■□□□ 1.88
LINC00887-203ENST00000429578 CFAP43Q8NDM7 1665 aa26.78■■□□□ 1.88
LINC00887-203ENST00000429578 MAPKBP1O60336 1514 aa26.78■■□□□ 1.88
LINC00887-203ENST00000429578 KIF13AQ9H1H9 1805 aa26.77■■□□□ 1.88
LINC00887-203ENST00000429578 EPRSP07814 1512 aaKnown RBP26.76■■□□□ 1.87
LINC00887-203ENST00000429578 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
LINC00887-203ENST00000429578 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
LINC00887-203ENST00000429578 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
LINC00887-203ENST00000429578 APLP2Q06481 763 aa26.73■■□□□ 1.87
LINC00887-203ENST00000429578 ABCC10Q5T3U5 1492 aa26.73■■□□□ 1.87
LINC00887-203ENST00000429578 FAM69CQ0P6D2 419 aa26.73■■□□□ 1.87
LINC00887-203ENST00000429578 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
LINC00887-203ENST00000429578 ATP10BO94823 1461 aa26.67■■□□□ 1.86
LINC00887-203ENST00000429578 ZCCHC11Q5TAX3 1644 aaKnown RBP26.67■■□□□ 1.86
LINC00887-203ENST00000429578 KDM5BQ9UGL1 1544 aa26.67■■□□□ 1.86
LINC00887-203ENST00000429578 DIP2BQ9P265 1576 aa26.66■■□□□ 1.86
LINC00887-203ENST00000429578 ARID3CA6NKF2 412 aa26.65■■□□□ 1.86
LINC00887-203ENST00000429578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
LINC00887-203ENST00000429578 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
LINC00887-203ENST00000429578 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
LINC00887-203ENST00000429578 MAGI3Q5TCQ9 1506 aa26.57■■□□□ 1.84
LINC00887-203ENST00000429578 KANK4Q5T7N3 995 aaPredicted RBP26.56■■□□□ 1.84
LINC00887-203ENST00000429578 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
LINC00887-203ENST00000429578 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
LINC00887-203ENST00000429578 ASXL2Q76L83 1435 aa26.53■■□□□ 1.84
LINC00887-203ENST00000429578 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
LINC00887-203ENST00000429578 PPARGC1BQ86YN6 1023 aaKnown RBP26.51■■□□□ 1.83
LINC00887-203ENST00000429578 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
LINC00887-203ENST00000429578 PLEKHD1A6NEE1 506 aa26.49■■□□□ 1.83
LINC00887-203ENST00000429578 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
LINC00887-203ENST00000429578 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
LINC00887-203ENST00000429578 KIF14Q15058 1648 aa26.42■■□□□ 1.82
LINC00887-203ENST00000429578 WDR7Q9Y4E6 1490 aa26.41■■□□□ 1.82
LINC00887-203ENST00000429578 GLI2P10070 1586 aa26.41■■□□□ 1.82
LINC00887-203ENST00000429578 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.81
LINC00887-203ENST00000429578 KDM6BO15054 1643 aa26.38■■□□□ 1.81
LINC00887-203ENST00000429578 NCOA2Q15596 1464 aa26.37■■□□□ 1.81
LINC00887-203ENST00000429578 KCNH8Q96L42 1107 aa26.3■■□□□ 1.8
LINC00887-203ENST00000429578 PPRC1Q5VV67 1664 aaKnown RBP26.3■■□□□ 1.8
LINC00887-203ENST00000429578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
LINC00887-203ENST00000429578 CDC42BPAQ5VT25 1732 aa26.29■■□□□ 1.8
LINC00887-203ENST00000429578 ITSN2Q9NZM3 1697 aa26.28■■□□□ 1.8
LINC00887-203ENST00000429578 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
LINC00887-203ENST00000429578 PHLDB1Q86UU1 1377 aa26.28■■□□□ 1.8
LINC00887-203ENST00000429578 MAP3K4Q9Y6R4 1608 aa26.27■■□□□ 1.8
LINC00887-203ENST00000429578 ABCA9Q8IUA7 1624 aa26.27■■□□□ 1.8
LINC00887-203ENST00000429578 MYO5CQ9NQX4 1742 aa26.26■■□□□ 1.79
LINC00887-203ENST00000429578 MYOM3Q5VTT5 1437 aa26.23■■□□□ 1.79
LINC00887-203ENST00000429578 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
LINC00887-203ENST00000429578 TEX14Q8IWB6 1497 aa26.21■■□□□ 1.79
LINC00887-203ENST00000429578 PREX2Q70Z35 1606 aa26.21■■□□□ 1.79
LINC00887-203ENST00000429578 CDC42BPBQ9Y5S2 1711 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms