RNA–Protein interactions for RNA: ENST00000429257.5

HERC2P3-206, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

BASIC

Gene HERC2P3, Length 4,088 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-206ENST00000429257 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
HERC2P3-206ENST00000429257 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
HERC2P3-206ENST00000429257 CCER2I3L3R5 266 aa12.81□□□□□ -0.36
HERC2P3-206ENST00000429257 EEA1Q15075 1411 aa12.8□□□□□ -0.36
HERC2P3-206ENST00000429257 ZBTB47Q9UFB7 747 aaPredicted RBP12.8□□□□□ -0.36
HERC2P3-206ENST00000429257 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
HERC2P3-206ENST00000429257 FANCD2Q9BXW9 1451 aa12.79□□□□□ -0.36
HERC2P3-206ENST00000429257 PPP4R2Q9NY27 417 aa12.79□□□□□ -0.36
HERC2P3-206ENST00000429257 HNRNPUQ00839 825 aaKnown RBP eCLIP12.79□□□□□ -0.36
HERC2P3-206ENST00000429257 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
HERC2P3-206ENST00000429257 SOGA1O94964 1423 aa12.78□□□□□ -0.36
HERC2P3-206ENST00000429257 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
HERC2P3-206ENST00000429257 GOLGA3Q08378 1498 aa12.77□□□□□ -0.36
HERC2P3-206ENST00000429257 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.36
HERC2P3-206ENST00000429257 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
HERC2P3-206ENST00000429257 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
HERC2P3-206ENST00000429257 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
HERC2P3-206ENST00000429257 CLIP1P30622 1438 aa12.74□□□□□ -0.37
HERC2P3-206ENST00000429257 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
HERC2P3-206ENST00000429257 CUX2O14529 1486 aa12.73□□□□□ -0.37
HERC2P3-206ENST00000429257 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
HERC2P3-206ENST00000429257 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
HERC2P3-206ENST00000429257 CFTRP13569 1480 aa12.7□□□□□ -0.38
HERC2P3-206ENST00000429257 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
HERC2P3-206ENST00000429257 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
HERC2P3-206ENST00000429257 VPS8Q8N3P4 1428 aa12.67□□□□□ -0.38
HERC2P3-206ENST00000429257 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
HERC2P3-206ENST00000429257 IPO9Q96P70 1041 aaKnown RBP12.66□□□□□ -0.38
HERC2P3-206ENST00000429257 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
HERC2P3-206ENST00000429257 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
HERC2P3-206ENST00000429257 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
HERC2P3-206ENST00000429257 NEFMP07197 916 aa12.62□□□□□ -0.39
HERC2P3-206ENST00000429257 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
HERC2P3-206ENST00000429257 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
HERC2P3-206ENST00000429257 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
HERC2P3-206ENST00000429257 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
HERC2P3-206ENST00000429257 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
HERC2P3-206ENST00000429257 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
HERC2P3-206ENST00000429257 CARMIL1Q5VZK9 1371 aa12.58□□□□□ -0.4
HERC2P3-206ENST00000429257 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
HERC2P3-206ENST00000429257 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
HERC2P3-206ENST00000429257 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
HERC2P3-206ENST00000429257 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
HERC2P3-206ENST00000429257 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
HERC2P3-206ENST00000429257 CUX1P39880 1505 aa12.53□□□□□ -0.4
HERC2P3-206ENST00000429257 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.4
HERC2P3-206ENST00000429257 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■■■□□ 17.9
HERC2P3-206ENST00000429257 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
HERC2P3-206ENST00000429257 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
HERC2P3-206ENST00000429257 FAM9BQ8IZU0 186 aa12.51□□□□□ -0.41
HERC2P3-206ENST00000429257 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
HERC2P3-206ENST00000429257 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
HERC2P3-206ENST00000429257 TONSLQ96HA7 1378 aa12.5□□□□□ -0.41
HERC2P3-206ENST00000429257 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
HERC2P3-206ENST00000429257 FAM50AQ14320 339 aaKnown RBP12.48□□□□□ -0.41
HERC2P3-206ENST00000429257 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
HERC2P3-206ENST00000429257 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
HERC2P3-206ENST00000429257 MRS2Q9HD23 443 aa12.46□□□□□ -0.41
HERC2P3-206ENST00000429257 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.42
HERC2P3-206ENST00000429257 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
HERC2P3-206ENST00000429257 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
HERC2P3-206ENST00000429257 C11orf95C9JLR9 678 aaPredicted RBP12.44□□□□□ -0.42
HERC2P3-206ENST00000429257 GSE1Q14687 1217 aa12.44□□□□□ -0.42
HERC2P3-206ENST00000429257 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
HERC2P3-206ENST00000429257 IGF1RP08069 1367 aa12.43□□□□□ -0.42
HERC2P3-206ENST00000429257 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
HERC2P3-206ENST00000429257 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
HERC2P3-206ENST00000429257 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
HERC2P3-206ENST00000429257 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
HERC2P3-206ENST00000429257 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
HERC2P3-206ENST00000429257 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
HERC2P3-206ENST00000429257 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
HERC2P3-206ENST00000429257 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
HERC2P3-206ENST00000429257 ZBED9Q6R2W3 1325 aa12.38□□□□□ -0.43
HERC2P3-206ENST00000429257 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
HERC2P3-206ENST00000429257 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
HERC2P3-206ENST00000429257 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
HERC2P3-206ENST00000429257 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
HERC2P3-206ENST00000429257 KIF21BO75037 1637 aa12.36□□□□□ -0.43
HERC2P3-206ENST00000429257 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
HERC2P3-206ENST00000429257 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
HERC2P3-206ENST00000429257 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
HERC2P3-206ENST00000429257 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.43
HERC2P3-206ENST00000429257 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
HERC2P3-206ENST00000429257 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
HERC2P3-206ENST00000429257 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
HERC2P3-206ENST00000429257 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■■■■ 34
HERC2P3-206ENST00000429257 PDE4AP27815 886 aa12.31□□□□□ -0.44
HERC2P3-206ENST00000429257 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
HERC2P3-206ENST00000429257 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
HERC2P3-206ENST00000429257 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
HERC2P3-206ENST00000429257 GRIN2BQ13224 1484 aa12.3□□□□□ -0.44
HERC2P3-206ENST00000429257 FHOD3Q2V2M9 1422 aa12.3□□□□□ -0.44
HERC2P3-206ENST00000429257 FRAT1Q92837 279 aaPredicted RBP12.29□□□□□ -0.44
HERC2P3-206ENST00000429257 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
HERC2P3-206ENST00000429257 NFKBIBQ15653 356 aa12.28□□□□□ -0.44
HERC2P3-206ENST00000429257 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
HERC2P3-206ENST00000429257 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
HERC2P3-206ENST00000429257 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.44
HERC2P3-206ENST00000429257 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms