RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
CHEK1-203ENST00000428830 FBLN2P98095 1184 aa20.55■□□□□ 0.88
CHEK1-203ENST00000428830 CHD1O14646 1710 aa20.51■□□□□ 0.87
CHEK1-203ENST00000428830 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
CHEK1-203ENST00000428830 NUP160Q12769 1436 aa20.49■□□□□ 0.87
CHEK1-203ENST00000428830 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
CHEK1-203ENST00000428830 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
CHEK1-203ENST00000428830 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
CHEK1-203ENST00000428830 EFCAB5A4FU69 1503 aa20.46■□□□□ 0.87
CHEK1-203ENST00000428830 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
CHEK1-203ENST00000428830 SAMD9Q5K651 1589 aa20.41■□□□□ 0.86
CHEK1-203ENST00000428830 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
CHEK1-203ENST00000428830 UGGT2Q9NYU1 1516 aa20.4■□□□□ 0.86
CHEK1-203ENST00000428830 FHOD3Q2V2M9 1422 aa20.33■□□□□ 0.85
CHEK1-203ENST00000428830 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
CHEK1-203ENST00000428830 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
CHEK1-203ENST00000428830 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
CHEK1-203ENST00000428830 KIAA0556O60303 1618 aa20.29■□□□□ 0.84
CHEK1-203ENST00000428830 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
CHEK1-203ENST00000428830 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
CHEK1-203ENST00000428830 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
CHEK1-203ENST00000428830 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
CHEK1-203ENST00000428830 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
CHEK1-203ENST00000428830 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-203ENST00000428830 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
CHEK1-203ENST00000428830 CASKIN1Q8WXD9 1431 aa20.18■□□□□ 0.82
CHEK1-203ENST00000428830 APLP2Q06481 763 aa20.18■□□□□ 0.82
CHEK1-203ENST00000428830 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
CHEK1-203ENST00000428830 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
CHEK1-203ENST00000428830 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
CHEK1-203ENST00000428830 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
CHEK1-203ENST00000428830 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
CHEK1-203ENST00000428830 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
CHEK1-203ENST00000428830 HECW1Q76N89 1606 aa20.08■□□□□ 0.81
CHEK1-203ENST00000428830 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.81
CHEK1-203ENST00000428830 CFAP43Q8NDM7 1665 aa20.08■□□□□ 0.8
CHEK1-203ENST00000428830 RAPGEF6Q8TEU7 1601 aa20.07■□□□□ 0.8
CHEK1-203ENST00000428830 LRRIQ1Q96JM4 1722 aa20.05■□□□□ 0.8
CHEK1-203ENST00000428830 PTPRGP23470 1445 aa20.05■□□□□ 0.8
CHEK1-203ENST00000428830 PLB1Q6P1J6 1458 aa20.03■□□□□ 0.8
CHEK1-203ENST00000428830 CCDC18Q5T9S5 1454 aa20.03■□□□□ 0.8
CHEK1-203ENST00000428830 ABCA8O94911 1581 aa20.01■□□□□ 0.79
CHEK1-203ENST00000428830 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
CHEK1-203ENST00000428830 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
CHEK1-203ENST00000428830 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
CHEK1-203ENST00000428830 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
CHEK1-203ENST00000428830 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
CHEK1-203ENST00000428830 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
CHEK1-203ENST00000428830 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
CHEK1-203ENST00000428830 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
CHEK1-203ENST00000428830 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
CHEK1-203ENST00000428830 ABCC2Q92887 1545 aa19.89■□□□□ 0.78
CHEK1-203ENST00000428830 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
CHEK1-203ENST00000428830 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
CHEK1-203ENST00000428830 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
CHEK1-203ENST00000428830 UHRF1BP1LA0JNW5 1464 aa19.86■□□□□ 0.77
CHEK1-203ENST00000428830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
CHEK1-203ENST00000428830 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
CHEK1-203ENST00000428830 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
CHEK1-203ENST00000428830 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
CHEK1-203ENST00000428830 ATP10BO94823 1461 aa19.85■□□□□ 0.77
CHEK1-203ENST00000428830 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
CHEK1-203ENST00000428830 ADCY10Q96PN6 1610 aa19.79■□□□□ 0.76
CHEK1-203ENST00000428830 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
CHEK1-203ENST00000428830 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
CHEK1-203ENST00000428830 KDM5BQ9UGL1 1544 aa19.78■□□□□ 0.76
CHEK1-203ENST00000428830 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
CHEK1-203ENST00000428830 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.75
CHEK1-203ENST00000428830 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.75
CHEK1-203ENST00000428830 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.75
CHEK1-203ENST00000428830 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
CHEK1-203ENST00000428830 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
CHEK1-203ENST00000428830 PLEKHD1A6NEE1 506 aa19.75■□□□□ 0.75
CHEK1-203ENST00000428830 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
CHEK1-203ENST00000428830 KIF14Q15058 1648 aa19.7■□□□□ 0.74
CHEK1-203ENST00000428830 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
CHEK1-203ENST00000428830 FGD6Q6ZV73 1430 aa19.67■□□□□ 0.74
CHEK1-203ENST00000428830 CYB5RLQ6IPT4 315 aa19.64■□□□□ 0.73
CHEK1-203ENST00000428830 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHEK1-203ENST00000428830 ITSN2Q9NZM3 1697 aa19.62■□□□□ 0.73
CHEK1-203ENST00000428830 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
CHEK1-203ENST00000428830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHEK1-203ENST00000428830 MIA2Q96PC5 1412 aa19.61■□□□□ 0.73
CHEK1-203ENST00000428830 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
CHEK1-203ENST00000428830 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
CHEK1-203ENST00000428830 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
CHEK1-203ENST00000428830 GPATCH8Q9UKJ3 1502 aaKnown RBP19.58■□□□□ 0.73
CHEK1-203ENST00000428830 CDC42BPAQ5VT25 1732 aa19.58■□□□□ 0.73
CHEK1-203ENST00000428830 ASXL2Q76L83 1435 aa19.58■□□□□ 0.72
CHEK1-203ENST00000428830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHEK1-203ENST00000428830 TCOF1Q13428 1488 aaKnown RBP19.56■□□□□ 0.72
CHEK1-203ENST00000428830 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
CHEK1-203ENST00000428830 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
CHEK1-203ENST00000428830 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
CHEK1-203ENST00000428830 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
CHEK1-203ENST00000428830 MYO5CQ9NQX4 1742 aa19.52■□□□□ 0.72
CHEK1-203ENST00000428830 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
CHEK1-203ENST00000428830 ITGAEP38570 1179 aa19.5■□□□□ 0.71
CHEK1-203ENST00000428830 CDC42BPBQ9Y5S2 1711 aa19.5■□□□□ 0.71
CHEK1-203ENST00000428830 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms