RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
NR1I3-209ENST00000428574 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
NR1I3-209ENST00000428574 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
NR1I3-209ENST00000428574 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
NR1I3-209ENST00000428574 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
NR1I3-209ENST00000428574 NUP160Q12769 1436 aa14.34□□□□□ -0.11
NR1I3-209ENST00000428574 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
NR1I3-209ENST00000428574 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
NR1I3-209ENST00000428574 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
NR1I3-209ENST00000428574 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
NR1I3-209ENST00000428574 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
NR1I3-209ENST00000428574 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-209ENST00000428574 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NR1I3-209ENST00000428574 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NR1I3-209ENST00000428574 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
NR1I3-209ENST00000428574 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
NR1I3-209ENST00000428574 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NR1I3-209ENST00000428574 CHD1O14646 1710 aa14.2□□□□□ -0.14
NR1I3-209ENST00000428574 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
NR1I3-209ENST00000428574 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
NR1I3-209ENST00000428574 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NR1I3-209ENST00000428574 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
NR1I3-209ENST00000428574 FOXD1Q16676 465 aa14.17□□□□□ -0.14
NR1I3-209ENST00000428574 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
NR1I3-209ENST00000428574 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
NR1I3-209ENST00000428574 FBLN2P98095 1184 aa14.15□□□□□ -0.14
NR1I3-209ENST00000428574 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
NR1I3-209ENST00000428574 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
NR1I3-209ENST00000428574 APLP2Q06481 763 aa14.13□□□□□ -0.15
NR1I3-209ENST00000428574 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-209ENST00000428574 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
NR1I3-209ENST00000428574 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
NR1I3-209ENST00000428574 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
NR1I3-209ENST00000428574 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
NR1I3-209ENST00000428574 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
NR1I3-209ENST00000428574 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
NR1I3-209ENST00000428574 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
NR1I3-209ENST00000428574 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
NR1I3-209ENST00000428574 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
NR1I3-209ENST00000428574 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
NR1I3-209ENST00000428574 ABCA8O94911 1581 aa14□□□□□ -0.17
NR1I3-209ENST00000428574 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
NR1I3-209ENST00000428574 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
NR1I3-209ENST00000428574 PTPRGP23470 1445 aa13.98□□□□□ -0.17
NR1I3-209ENST00000428574 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
NR1I3-209ENST00000428574 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
NR1I3-209ENST00000428574 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
NR1I3-209ENST00000428574 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
NR1I3-209ENST00000428574 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
NR1I3-209ENST00000428574 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
NR1I3-209ENST00000428574 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
NR1I3-209ENST00000428574 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
NR1I3-209ENST00000428574 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-209ENST00000428574 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-209ENST00000428574 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
NR1I3-209ENST00000428574 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
NR1I3-209ENST00000428574 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
NR1I3-209ENST00000428574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
NR1I3-209ENST00000428574 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
NR1I3-209ENST00000428574 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
NR1I3-209ENST00000428574 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
NR1I3-209ENST00000428574 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-209ENST00000428574 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-209ENST00000428574 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
NR1I3-209ENST00000428574 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
NR1I3-209ENST00000428574 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
NR1I3-209ENST00000428574 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
NR1I3-209ENST00000428574 ATP10BO94823 1461 aa13.85□□□□□ -0.19
NR1I3-209ENST00000428574 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
NR1I3-209ENST00000428574 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
NR1I3-209ENST00000428574 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
NR1I3-209ENST00000428574 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
NR1I3-209ENST00000428574 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NR1I3-209ENST00000428574 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
NR1I3-209ENST00000428574 KIF14Q15058 1648 aa13.79□□□□□ -0.2
NR1I3-209ENST00000428574 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
NR1I3-209ENST00000428574 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
NR1I3-209ENST00000428574 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
NR1I3-209ENST00000428574 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NR1I3-209ENST00000428574 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-209ENST00000428574 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
NR1I3-209ENST00000428574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
NR1I3-209ENST00000428574 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
NR1I3-209ENST00000428574 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
NR1I3-209ENST00000428574 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
NR1I3-209ENST00000428574 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
NR1I3-209ENST00000428574 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
NR1I3-209ENST00000428574 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
NR1I3-209ENST00000428574 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
NR1I3-209ENST00000428574 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
NR1I3-209ENST00000428574 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
NR1I3-209ENST00000428574 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
NR1I3-209ENST00000428574 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
NR1I3-209ENST00000428574 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
NR1I3-209ENST00000428574 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
NR1I3-209ENST00000428574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
NR1I3-209ENST00000428574 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
NR1I3-209ENST00000428574 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
NR1I3-209ENST00000428574 HRCP23327 699 aa13.64□□□□□ -0.23
NR1I3-209ENST00000428574 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms