RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TNIKQ9UKE5 1360 aa24.7■■□□□ 1.54
TVP23C-203ENST00000428082 CHD1O14646 1710 aa24.68■■□□□ 1.54
TVP23C-203ENST00000428082 CTTNBP2Q8WZ74 1663 aa24.63■■□□□ 1.53
TVP23C-203ENST00000428082 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
TVP23C-203ENST00000428082 NUP160Q12769 1436 aa24.56■■□□□ 1.52
TVP23C-203ENST00000428082 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
TVP23C-203ENST00000428082 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
TVP23C-203ENST00000428082 KIAA0586Q9BVV6 1533 aa24.5■■□□□ 1.51
TVP23C-203ENST00000428082 IQGAP2Q13576 1575 aa24.5■■□□□ 1.51
TVP23C-203ENST00000428082 CLIP1P30622 1438 aa24.46■■□□□ 1.51
TVP23C-203ENST00000428082 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
TVP23C-203ENST00000428082 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
TVP23C-203ENST00000428082 CLASP1Q7Z460 1538 aa24.38■■□□□ 1.49
TVP23C-203ENST00000428082 UGGT2Q9NYU1 1516 aa24.37■■□□□ 1.49
TVP23C-203ENST00000428082 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
TVP23C-203ENST00000428082 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
TVP23C-203ENST00000428082 JPH4Q96JJ6 628 aa24.34■■□□□ 1.49
TVP23C-203ENST00000428082 EFCAB5A4FU69 1503 aa24.33■■□□□ 1.49
TVP23C-203ENST00000428082 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
TVP23C-203ENST00000428082 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
TVP23C-203ENST00000428082 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
TVP23C-203ENST00000428082 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
TVP23C-203ENST00000428082 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
TVP23C-203ENST00000428082 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
TVP23C-203ENST00000428082 KIAA0556O60303 1618 aa24.26■■□□□ 1.47
TVP23C-203ENST00000428082 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
TVP23C-203ENST00000428082 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
TVP23C-203ENST00000428082 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
TVP23C-203ENST00000428082 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
TVP23C-203ENST00000428082 TTBK1Q5TCY1 1321 aaPredicted RBP24.12■■□□□ 1.45
TVP23C-203ENST00000428082 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
TVP23C-203ENST00000428082 PCF11O94913 1555 aaKnown RBP24.06■■□□□ 1.44
TVP23C-203ENST00000428082 PTPRGP23470 1445 aa24.02■■□□□ 1.44
TVP23C-203ENST00000428082 CASKIN1Q8WXD9 1431 aa24.01■■□□□ 1.43
TVP23C-203ENST00000428082 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
TVP23C-203ENST00000428082 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
TVP23C-203ENST00000428082 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
TVP23C-203ENST00000428082 ARHGEF11O15085 1522 aa23.97■■□□□ 1.43
TVP23C-203ENST00000428082 RAPGEF6Q8TEU7 1601 aa23.97■■□□□ 1.43
TVP23C-203ENST00000428082 LRRIQ1Q96JM4 1722 aa23.94■■□□□ 1.42
TVP23C-203ENST00000428082 ABCA8O94911 1581 aa23.94■■□□□ 1.42
TVP23C-203ENST00000428082 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
TVP23C-203ENST00000428082 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
TVP23C-203ENST00000428082 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
TVP23C-203ENST00000428082 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
TVP23C-203ENST00000428082 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
TVP23C-203ENST00000428082 APLP2Q06481 763 aa23.89■■□□□ 1.42
TVP23C-203ENST00000428082 UACAQ9BZF9 1416 aa23.88■■□□□ 1.41
TVP23C-203ENST00000428082 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
TVP23C-203ENST00000428082 TIAM1Q13009 1591 aa23.85■■□□□ 1.41
TVP23C-203ENST00000428082 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
TVP23C-203ENST00000428082 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
TVP23C-203ENST00000428082 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.41
TVP23C-203ENST00000428082 ABCC2Q92887 1545 aa23.83■■□□□ 1.41
TVP23C-203ENST00000428082 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
TVP23C-203ENST00000428082 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
TVP23C-203ENST00000428082 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
TVP23C-203ENST00000428082 UHRF1BP1LA0JNW5 1464 aa23.79■■□□□ 1.4
TVP23C-203ENST00000428082 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
TVP23C-203ENST00000428082 ATP10BO94823 1461 aa23.76■■□□□ 1.39
TVP23C-203ENST00000428082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
TVP23C-203ENST00000428082 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
TVP23C-203ENST00000428082 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
TVP23C-203ENST00000428082 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
TVP23C-203ENST00000428082 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
TVP23C-203ENST00000428082 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
TVP23C-203ENST00000428082 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
TVP23C-203ENST00000428082 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
TVP23C-203ENST00000428082 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
TVP23C-203ENST00000428082 EHBP1L1Q8N3D4 1523 aa23.65■■□□□ 1.38
TVP23C-203ENST00000428082 CDK11AQ9UQ88 783 aaPredicted RBP23.65■■□□□ 1.38
TVP23C-203ENST00000428082 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
TVP23C-203ENST00000428082 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
TVP23C-203ENST00000428082 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
TVP23C-203ENST00000428082 SUPT6HQ7KZ85 1726 aaKnown RBP23.58■■□□□ 1.36
TVP23C-203ENST00000428082 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
TVP23C-203ENST00000428082 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
TVP23C-203ENST00000428082 KIF14Q15058 1648 aa23.54■■□□□ 1.36
TVP23C-203ENST00000428082 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
TVP23C-203ENST00000428082 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
TVP23C-203ENST00000428082 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
TVP23C-203ENST00000428082 KCNH8Q96L42 1107 aa23.47■■□□□ 1.35
TVP23C-203ENST00000428082 MAPKBP1O60336 1514 aa23.44■■□□□ 1.34
TVP23C-203ENST00000428082 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
TVP23C-203ENST00000428082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
TVP23C-203ENST00000428082 MYOM3Q5VTT5 1437 aa23.41■■□□□ 1.34
TVP23C-203ENST00000428082 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
TVP23C-203ENST00000428082 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
TVP23C-203ENST00000428082 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
TVP23C-203ENST00000428082 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
TVP23C-203ENST00000428082 GPATCH8Q9UKJ3 1502 aaKnown RBP23.36■■□□□ 1.33
TVP23C-203ENST00000428082 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
TVP23C-203ENST00000428082 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
TVP23C-203ENST00000428082 ABCA9Q8IUA7 1624 aa23.33■■□□□ 1.33
TVP23C-203ENST00000428082 MYO5CQ9NQX4 1742 aa23.31■■□□□ 1.32
TVP23C-203ENST00000428082 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
TVP23C-203ENST00000428082 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
TVP23C-203ENST00000428082 MIA2Q96PC5 1412 aa23.3■■□□□ 1.32
TVP23C-203ENST00000428082 PTPN23Q9H3S7 1636 aa23.29■■□□□ 1.32
TVP23C-203ENST00000428082 CFDP1Q9UEE9 299 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms