RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 KCNA4P22459 653 aa10.52□□□□□ -0.73
LINC01108-201ENST00000427276 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC01108-201ENST00000427276 KIF21BO75037 1637 aa10.52□□□□□ -0.73
LINC01108-201ENST00000427276 CDK11AQ9UQ88 783 aaPredicted RBP10.51□□□□□ -0.73
LINC01108-201ENST00000427276 CCNB3Q8WWL7 1395 aa10.5□□□□□ -0.73
LINC01108-201ENST00000427276 RAB3GAP2Q9H2M9 1393 aa10.5□□□□□ -0.73
LINC01108-201ENST00000427276 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
LINC01108-201ENST00000427276 NCAPD3P42695 1498 aa10.47□□□□□ -0.73
LINC01108-201ENST00000427276 MSH5O43196 834 aa10.47□□□□□ -0.73
LINC01108-201ENST00000427276 NBR1Q14596 966 aa10.44□□□□□ -0.74
LINC01108-201ENST00000427276 SENP3-EIF4A1A0A087X0R7 540 aa10.44□□□□□ -0.74
LINC01108-201ENST00000427276 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
LINC01108-201ENST00000427276 BAZ1BQ9UIG0 1483 aaKnown RBP10.43□□□□□ -0.74
LINC01108-201ENST00000427276 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
LINC01108-201ENST00000427276 CUX2O14529 1486 aa10.42□□□□□ -0.74
LINC01108-201ENST00000427276 ARAP1Q96P48 1450 aa10.42□□□□□ -0.74
LINC01108-201ENST00000427276 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
LINC01108-201ENST00000427276 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
LINC01108-201ENST00000427276 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
LINC01108-201ENST00000427276 TONSLQ96HA7 1378 aa10.4□□□□□ -0.74
LINC01108-201ENST00000427276 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.75
LINC01108-201ENST00000427276 WDR97A6NE52 1622 aa10.39□□□□□ -0.75
LINC01108-201ENST00000427276 POLR3GLQ9BT43 218 aa10.39□□□□□ -0.75
LINC01108-201ENST00000427276 HMGXB3Q12766 1538 aa10.39□□□□□ -0.75
LINC01108-201ENST00000427276 SETD5Q9C0A6 1442 aa10.39□□□□□ -0.75
LINC01108-201ENST00000427276 CCER2I3L3R5 266 aa10.37□□□□□ -0.75
LINC01108-201ENST00000427276 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
LINC01108-201ENST00000427276 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
LINC01108-201ENST00000427276 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
LINC01108-201ENST00000427276 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
LINC01108-201ENST00000427276 NESP48681 1621 aa10.32□□□□□ -0.76
LINC01108-201ENST00000427276 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
LINC01108-201ENST00000427276 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
LINC01108-201ENST00000427276 PRXQ9BXM0 1461 aa10.31□□□□□ -0.76
LINC01108-201ENST00000427276 PHLDB1Q86UU1 1377 aa10.31□□□□□ -0.76
LINC01108-201ENST00000427276 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
LINC01108-201ENST00000427276 TOP2BQ02880 1626 aa10.3□□□□□ -0.76
LINC01108-201ENST00000427276 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
LINC01108-201ENST00000427276 PPP4R2Q9NY27 417 aa10.3□□□□□ -0.76
LINC01108-201ENST00000427276 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
LINC01108-201ENST00000427276 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
LINC01108-201ENST00000427276 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
LINC01108-201ENST00000427276 FANCIQ9NVI1 1328 aa10.29□□□□□ -0.76
LINC01108-201ENST00000427276 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
LINC01108-201ENST00000427276 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
LINC01108-201ENST00000427276 RRP7BPQ9NSQ0 103 aa10.28□□□□□ -0.76
LINC01108-201ENST00000427276 ARID3CA6NKF2 412 aa10.27□□□□□ -0.77
LINC01108-201ENST00000427276 HSPA5P11021 654 aaKnown RBP10.26□□□□□ -0.77
LINC01108-201ENST00000427276 NOP58Q9Y2X3 529 aaKnown RBP10.25□□□□□ -0.77
LINC01108-201ENST00000427276 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
LINC01108-201ENST00000427276 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 LAMC3Q9Y6N6 1575 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 CUX1P39880 1505 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 ZNF326Q5BKZ1 582 aaKnown RBP10.24□□□□□ -0.77
LINC01108-201ENST00000427276 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 FOXD1Q16676 465 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
LINC01108-201ENST00000427276 THOC2Q8NI27 1593 aaKnown RBP10.23□□□□□ -0.77
LINC01108-201ENST00000427276 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
LINC01108-201ENST00000427276 EIF4G2P78344 907 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC01108-201ENST00000427276 SALL2Q9Y467 1007 aaPredicted RBP10.22□□□□□ -0.77
LINC01108-201ENST00000427276 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.77
LINC01108-201ENST00000427276 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.78
LINC01108-201ENST00000427276 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.78
LINC01108-201ENST00000427276 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
LINC01108-201ENST00000427276 LRRC9Q6ZRR7 1453 aa10.2□□□□□ -0.78
LINC01108-201ENST00000427276 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
LINC01108-201ENST00000427276 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
LINC01108-201ENST00000427276 PDS5BQ9NTI5 1447 aa10.19□□□□□ -0.78
LINC01108-201ENST00000427276 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
LINC01108-201ENST00000427276 KIF21AQ7Z4S6 1674 aa10.18□□□□□ -0.78
LINC01108-201ENST00000427276 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
LINC01108-201ENST00000427276 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
LINC01108-201ENST00000427276 IGF1RP08069 1367 aa10.17□□□□□ -0.78
LINC01108-201ENST00000427276 TIAM1Q13009 1591 aa10.17□□□□□ -0.78
LINC01108-201ENST00000427276 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
LINC01108-201ENST00000427276 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
LINC01108-201ENST00000427276 C11orf95C9JLR9 678 aaPredicted RBP10.15□□□□□ -0.78
LINC01108-201ENST00000427276 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.79
LINC01108-201ENST00000427276 CCDC18Q5T9S5 1454 aa10.15□□□□□ -0.79
LINC01108-201ENST00000427276 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
LINC01108-201ENST00000427276 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
LINC01108-201ENST00000427276 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
LINC01108-201ENST00000427276 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
LINC01108-201ENST00000427276 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
LINC01108-201ENST00000427276 AKNAQ7Z591 1439 aa10.11□□□□□ -0.79
LINC01108-201ENST00000427276 MRC2Q9UBG0 1479 aa10.11□□□□□ -0.79
LINC01108-201ENST00000427276 IPO9Q96P70 1041 aaKnown RBP10.11□□□□□ -0.79
LINC01108-201ENST00000427276 ZBED9Q6R2W3 1325 aa10.1□□□□□ -0.79
LINC01108-201ENST00000427276 NEFMP07197 916 aa10.09□□□□□ -0.79
LINC01108-201ENST00000427276 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
LINC01108-201ENST00000427276 WDR62O43379 1518 aa10.08□□□□□ -0.8
LINC01108-201ENST00000427276 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
LINC01108-201ENST00000427276 ARXQ96QS3 562 aa10.08□□□□□ -0.8
LINC01108-201ENST00000427276 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
LINC01108-201ENST00000427276 MPHOSPH9Q99550 1183 aa10.08□□□□□ -0.8
LINC01108-201ENST00000427276 UACAQ9BZF9 1416 aa10.07□□□□□ -0.8
LINC01108-201ENST00000427276 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
LINC01108-201ENST00000427276 AQRO60306 1485 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC01108-201ENST00000427276 CNTLNQ9NXG0 1405 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms