RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
COL11A1-204ENST00000427239 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
COL11A1-204ENST00000427239 CLASP1Q7Z460 1538 aa24.97■■□□□ 1.59
COL11A1-204ENST00000427239 JPH4Q96JJ6 628 aa24.96■■□□□ 1.59
COL11A1-204ENST00000427239 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.59
COL11A1-204ENST00000427239 IQGAP2Q13576 1575 aa24.93■■□□□ 1.58
COL11A1-204ENST00000427239 CTTNBP2Q8WZ74 1663 aa24.92■■□□□ 1.58
COL11A1-204ENST00000427239 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
COL11A1-204ENST00000427239 SHROOM2Q13796 1616 aa24.83■■□□□ 1.56
COL11A1-204ENST00000427239 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
COL11A1-204ENST00000427239 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
COL11A1-204ENST00000427239 CARMIL2Q6F5E8 1435 aa24.79■■□□□ 1.56
COL11A1-204ENST00000427239 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
COL11A1-204ENST00000427239 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
COL11A1-204ENST00000427239 DISP1Q96F81 1524 aa24.73■■□□□ 1.55
COL11A1-204ENST00000427239 CLIP1P30622 1438 aa24.71■■□□□ 1.55
COL11A1-204ENST00000427239 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
COL11A1-204ENST00000427239 EFCAB5A4FU69 1503 aa24.7■■□□□ 1.54
COL11A1-204ENST00000427239 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
COL11A1-204ENST00000427239 SAMD9Q5K651 1589 aa24.68■■□□□ 1.54
COL11A1-204ENST00000427239 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
COL11A1-204ENST00000427239 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
COL11A1-204ENST00000427239 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
COL11A1-204ENST00000427239 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
COL11A1-204ENST00000427239 PTPRGP23470 1445 aa24.61■■□□□ 1.53
COL11A1-204ENST00000427239 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
COL11A1-204ENST00000427239 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
COL11A1-204ENST00000427239 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
COL11A1-204ENST00000427239 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
COL11A1-204ENST00000427239 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
COL11A1-204ENST00000427239 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
COL11A1-204ENST00000427239 FMN1Q68DA7 1419 aa24.52■■□□□ 1.52
COL11A1-204ENST00000427239 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
COL11A1-204ENST00000427239 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
COL11A1-204ENST00000427239 PLB1Q6P1J6 1458 aa24.41■■□□□ 1.5
COL11A1-204ENST00000427239 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
COL11A1-204ENST00000427239 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
COL11A1-204ENST00000427239 ABCA8O94911 1581 aa24.38■■□□□ 1.49
COL11A1-204ENST00000427239 CASKIN1Q8WXD9 1431 aa24.36■■□□□ 1.49
COL11A1-204ENST00000427239 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
COL11A1-204ENST00000427239 ATP1B4Q9UN42 357 aaPredicted RBP24.35■■□□□ 1.49
COL11A1-204ENST00000427239 RAPGEF6Q8TEU7 1601 aa24.34■■□□□ 1.49
COL11A1-204ENST00000427239 NPM1P06748 294 aaKnown RBP eCLIP24.32■■□□□ 1.48
COL11A1-204ENST00000427239 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
COL11A1-204ENST00000427239 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
COL11A1-204ENST00000427239 NUP153P49790 1475 aaKnown RBP24.28■■□□□ 1.48
COL11A1-204ENST00000427239 HECW1Q76N89 1606 aa24.26■■□□□ 1.47
COL11A1-204ENST00000427239 PCF11O94913 1555 aaKnown RBP24.26■■□□□ 1.47
COL11A1-204ENST00000427239 KDM5BQ9UGL1 1544 aa24.26■■□□□ 1.47
COL11A1-204ENST00000427239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.23■■□□□ 1.47
COL11A1-204ENST00000427239 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
COL11A1-204ENST00000427239 ATP10BO94823 1461 aa24.23■■□□□ 1.47
COL11A1-204ENST00000427239 EPRSP07814 1512 aaKnown RBP24.22■■□□□ 1.47
COL11A1-204ENST00000427239 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
COL11A1-204ENST00000427239 APLP2Q06481 763 aa24.21■■□□□ 1.47
COL11A1-204ENST00000427239 CCDC18Q5T9S5 1454 aa24.2■■□□□ 1.46
COL11A1-204ENST00000427239 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
COL11A1-204ENST00000427239 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
COL11A1-204ENST00000427239 ZCCHC11Q5TAX3 1644 aaKnown RBP24.14■■□□□ 1.46
COL11A1-204ENST00000427239 CDK13Q14004 1512 aaKnown RBP24.13■■□□□ 1.45
COL11A1-204ENST00000427239 MAP3K1Q13233 1512 aa24.13■■□□□ 1.45
COL11A1-204ENST00000427239 LRRIQ1Q96JM4 1722 aa24.09■■□□□ 1.45
COL11A1-204ENST00000427239 MAPKBP1O60336 1514 aa24.08■■□□□ 1.45
COL11A1-204ENST00000427239 ASXL2Q76L83 1435 aa24.08■■□□□ 1.45
COL11A1-204ENST00000427239 TIAM1Q13009 1591 aa24.06■■□□□ 1.44
COL11A1-204ENST00000427239 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
COL11A1-204ENST00000427239 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
COL11A1-204ENST00000427239 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
COL11A1-204ENST00000427239 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
COL11A1-204ENST00000427239 KANK4Q5T7N3 995 aaPredicted RBP24.01■■□□□ 1.43
COL11A1-204ENST00000427239 KCNH8Q96L42 1107 aa24.01■■□□□ 1.43
COL11A1-204ENST00000427239 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
COL11A1-204ENST00000427239 MAGI3Q5TCQ9 1506 aa23.96■■□□□ 1.43
COL11A1-204ENST00000427239 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
COL11A1-204ENST00000427239 ABCC10Q5T3U5 1492 aa23.93■■□□□ 1.42
COL11A1-204ENST00000427239 FAM69CQ0P6D2 419 aa23.9■■□□□ 1.42
COL11A1-204ENST00000427239 KIF14Q15058 1648 aa23.87■■□□□ 1.41
COL11A1-204ENST00000427239 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
COL11A1-204ENST00000427239 GLI2P10070 1586 aa23.86■■□□□ 1.41
COL11A1-204ENST00000427239 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
COL11A1-204ENST00000427239 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
COL11A1-204ENST00000427239 SUPT6HQ7KZ85 1726 aaKnown RBP23.83■■□□□ 1.41
COL11A1-204ENST00000427239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.83■■□□□ 1.41
COL11A1-204ENST00000427239 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
COL11A1-204ENST00000427239 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
COL11A1-204ENST00000427239 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
COL11A1-204ENST00000427239 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
COL11A1-204ENST00000427239 PLCH2O75038 1416 aa23.75■■□□□ 1.39
COL11A1-204ENST00000427239 TTC37Q6PGP7 1564 aa23.75■■□□□ 1.39
COL11A1-204ENST00000427239 GPATCH8Q9UKJ3 1502 aaKnown RBP23.74■■□□□ 1.39
COL11A1-204ENST00000427239 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
COL11A1-204ENST00000427239 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
COL11A1-204ENST00000427239 MAP3K4Q9Y6R4 1608 aa23.72■■□□□ 1.39
COL11A1-204ENST00000427239 CFDP1Q9UEE9 299 aaPredicted RBP23.72■■□□□ 1.39
COL11A1-204ENST00000427239 EFCAB2Q5VUJ9 269 aa23.71■■□□□ 1.39
COL11A1-204ENST00000427239 MYOM3Q5VTT5 1437 aa23.7■■□□□ 1.38
COL11A1-204ENST00000427239 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
COL11A1-204ENST00000427239 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
COL11A1-204ENST00000427239 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
COL11A1-204ENST00000427239 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms