RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 SHROOM2Q13796 1616 aa36.08■■■■□ 3.37
RPUSD3-205ENST00000427174 CSRNP3Q8WYN3 585 aa36■■■■□ 3.35
RPUSD3-205ENST00000427174 KIAA0586Q9BVV6 1533 aa35.99■■■■□ 3.35
RPUSD3-205ENST00000427174 ERCC6L2Q5T890 1561 aa35.89■■■■□ 3.34
RPUSD3-205ENST00000427174 CTTNBP2Q8WZ74 1663 aa35.88■■■■□ 3.33
RPUSD3-205ENST00000427174 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
RPUSD3-205ENST00000427174 IQGAP2Q13576 1575 aa35.85■■■■□ 3.33
RPUSD3-205ENST00000427174 FAM9AQ8IZU1 332 aaPredicted RBP35.85■■■■□ 3.33
RPUSD3-205ENST00000427174 JPH4Q96JJ6 628 aa35.84■■■■□ 3.33
RPUSD3-205ENST00000427174 KIF21BO75037 1637 aa35.83■■■■□ 3.33
RPUSD3-205ENST00000427174 PRG4Q92954 1404 aaPredicted RBP35.78■■■■□ 3.32
RPUSD3-205ENST00000427174 UGGT2Q9NYU1 1516 aa35.68■■■■□ 3.3
RPUSD3-205ENST00000427174 CYB5RLQ6IPT4 315 aa35.65■■■■□ 3.3
RPUSD3-205ENST00000427174 DISP1Q96F81 1524 aa35.59■■■■□ 3.29
RPUSD3-205ENST00000427174 GOLGA3Q08378 1498 aa35.54■■■■□ 3.28
RPUSD3-205ENST00000427174 CARMIL2Q6F5E8 1435 aa35.53■■■■□ 3.28
RPUSD3-205ENST00000427174 KIAA0556O60303 1618 aa35.52■■■■□ 3.28
RPUSD3-205ENST00000427174 TNIKQ9UKE5 1360 aa35.42■■■■□ 3.26
RPUSD3-205ENST00000427174 SAMD9Q5K651 1589 aa35.41■■■■□ 3.26
RPUSD3-205ENST00000427174 PTPRGP23470 1445 aa35.36■■■■□ 3.25
RPUSD3-205ENST00000427174 EHMT2Q96KQ7 1210 aa35.32■■■■□ 3.24
RPUSD3-205ENST00000427174 ADCY10Q96PN6 1610 aa35.31■■■■□ 3.24
RPUSD3-205ENST00000427174 UBTFP17480 764 aaKnown RBP35.3■■■■□ 3.24
RPUSD3-205ENST00000427174 EFCAB5A4FU69 1503 aa35.23■■■■□ 3.23
RPUSD3-205ENST00000427174 UHRF1BP1LA0JNW5 1464 aa35.18■■■■□ 3.22
RPUSD3-205ENST00000427174 UACAQ9BZF9 1416 aa35.16■■■■□ 3.22
RPUSD3-205ENST00000427174 TTBK1Q5TCY1 1321 aaPredicted RBP35.16■■■■□ 3.22
RPUSD3-205ENST00000427174 ABCC2Q92887 1545 aa35.15■■■■□ 3.22
RPUSD3-205ENST00000427174 ABCA8O94911 1581 aa35.13■■■■□ 3.21
RPUSD3-205ENST00000427174 P3H3Q8IVL6 736 aa35.12■■■■□ 3.21
RPUSD3-205ENST00000427174 RANGAP1P46060 587 aaPredicted RBP35.11■■■■□ 3.21
RPUSD3-205ENST00000427174 PLB1Q6P1J6 1458 aa35.09■■■■□ 3.21
RPUSD3-205ENST00000427174 ARHGAP35Q9NRY4 1499 aa35.09■■■■□ 3.21
RPUSD3-205ENST00000427174 FHOD3Q2V2M9 1422 aa35.08■■■■□ 3.21
RPUSD3-205ENST00000427174 MAPKBP1O60336 1514 aa35.02■■■■□ 3.2
RPUSD3-205ENST00000427174 KDM5BQ9UGL1 1544 aa35.01■■■■□ 3.2
RPUSD3-205ENST00000427174 RAPGEF6Q8TEU7 1601 aa34.98■■■■□ 3.19
RPUSD3-205ENST00000427174 ZCCHC11Q5TAX3 1644 aaKnown RBP34.97■■■■□ 3.19
RPUSD3-205ENST00000427174 NPM1P06748 294 aaKnown RBP eCLIP34.94■■■■□ 3.18
RPUSD3-205ENST00000427174 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
RPUSD3-205ENST00000427174 KIF13AQ9H1H9 1805 aa34.89■■■■□ 3.18
RPUSD3-205ENST00000427174 CLIP1P30622 1438 aa34.89■■■■□ 3.18
RPUSD3-205ENST00000427174 FMN1Q68DA7 1419 aa34.84■■■■□ 3.17
RPUSD3-205ENST00000427174 NUP153P49790 1475 aaKnown RBP34.84■■■■□ 3.17
RPUSD3-205ENST00000427174 CEP162Q5TB80 1403 aa34.81■■■■□ 3.16
RPUSD3-205ENST00000427174 ASXL2Q76L83 1435 aa34.81■■■■□ 3.16
RPUSD3-205ENST00000427174 DIP2BQ9P265 1576 aa34.79■■■■□ 3.16
RPUSD3-205ENST00000427174 ATP10BO94823 1461 aa34.79■■■■□ 3.16
RPUSD3-205ENST00000427174 ABCC10Q5T3U5 1492 aa34.79■■■■□ 3.16
RPUSD3-205ENST00000427174 TRHP20396 242 aaPredicted RBP34.77■■■■□ 3.16
RPUSD3-205ENST00000427174 HECW1Q76N89 1606 aa34.7■■■■□ 3.15
RPUSD3-205ENST00000427174 LRRIQ1Q96JM4 1722 aa34.69■■■■□ 3.14
RPUSD3-205ENST00000427174 WDR7Q9Y4E6 1490 aa34.68■■■■□ 3.14
RPUSD3-205ENST00000427174 PCF11O94913 1555 aaKnown RBP34.67■■■■□ 3.14
RPUSD3-205ENST00000427174 GLI2P10070 1586 aa34.66■■■■□ 3.14
RPUSD3-205ENST00000427174 CASKIN1Q8WXD9 1431 aa34.64■■■■□ 3.14
RPUSD3-205ENST00000427174 ARID3CA6NKF2 412 aa34.63■■■■□ 3.13
RPUSD3-205ENST00000427174 EPRSP07814 1512 aaKnown RBP34.63■■■■□ 3.13
RPUSD3-205ENST00000427174 CDK13Q14004 1512 aaKnown RBP34.6■■■■□ 3.13
RPUSD3-205ENST00000427174 FAM69CQ0P6D2 419 aa34.59■■■■□ 3.13
RPUSD3-205ENST00000427174 FYCO1Q9BQS8 1478 aa34.57■■■■□ 3.12
RPUSD3-205ENST00000427174 MAP3K4Q9Y6R4 1608 aa34.53■■■■□ 3.12
RPUSD3-205ENST00000427174 TSPOAP1O95153 1857 aa34.5■■■■□ 3.11
RPUSD3-205ENST00000427174 PPRC1Q5VV67 1664 aaKnown RBP34.49■■■■□ 3.11
RPUSD3-205ENST00000427174 CFAP43Q8NDM7 1665 aa34.47■■■■□ 3.11
RPUSD3-205ENST00000427174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.46■■■■□ 3.11
RPUSD3-205ENST00000427174 HNRNPUL2Q1KMD3 747 aaKnown RBP34.46■■■■□ 3.11
RPUSD3-205ENST00000427174 CCDC18Q5T9S5 1454 aa34.46■■■■□ 3.11
RPUSD3-205ENST00000427174 ATP1B4Q9UN42 357 aaPredicted RBP34.45■■■■□ 3.11
RPUSD3-205ENST00000427174 ABCA9Q8IUA7 1624 aa34.43■■■■□ 3.1
RPUSD3-205ENST00000427174 KCNH8Q96L42 1107 aa34.41■■■■□ 3.1
RPUSD3-205ENST00000427174 PLEKHD1A6NEE1 506 aa34.39■■■■□ 3.1
RPUSD3-205ENST00000427174 VPS8Q8N3P4 1428 aa34.38■■■■□ 3.09
RPUSD3-205ENST00000427174 MAGI3Q5TCQ9 1506 aa34.32■■■■□ 3.08
RPUSD3-205ENST00000427174 TROQ12816 1431 aaPredicted RBP34.3■■■■□ 3.08
RPUSD3-205ENST00000427174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.3■■■■□ 3.08
RPUSD3-205ENST00000427174 CD109Q6YHK3 1445 aa34.3■■■■□ 3.08
RPUSD3-205ENST00000427174 CDK11AQ9UQ88 783 aaPredicted RBP34.29■■■■□ 3.08
RPUSD3-205ENST00000427174 KIF14Q15058 1648 aa34.27■■■■□ 3.08
RPUSD3-205ENST00000427174 TTC37Q6PGP7 1564 aa34.27■■■■□ 3.08
RPUSD3-205ENST00000427174 TEX14Q8IWB6 1497 aa34.23■■■■□ 3.07
RPUSD3-205ENST00000427174 TIAM1Q13009 1591 aa34.18■■■■□ 3.06
RPUSD3-205ENST00000427174 MYO5CQ9NQX4 1742 aa34.14■■■■□ 3.06
RPUSD3-205ENST00000427174 KDM6BO15054 1643 aa34.12■■■■□ 3.05
RPUSD3-205ENST00000427174 MAP3K1Q13233 1512 aa34.12■■■■□ 3.05
RPUSD3-205ENST00000427174 EHBP1L1Q8N3D4 1523 aa34.09■■■■□ 3.05
RPUSD3-205ENST00000427174 ARAP3Q8WWN8 1544 aa34.07■■■■□ 3.04
RPUSD3-205ENST00000427174 PLCH2O75038 1416 aa34.05■■■■□ 3.04
RPUSD3-205ENST00000427174 NEO1Q92859 1461 aa34.05■■■■□ 3.04
RPUSD3-205ENST00000427174 COL17A1Q9UMD9 1497 aaPredicted RBP34.05■■■■□ 3.04
RPUSD3-205ENST00000427174 CDC42BPAQ5VT25 1732 aa34.04■■■■□ 3.04
RPUSD3-205ENST00000427174 CDC42BPBQ9Y5S2 1711 aa34.04■■■■□ 3.04
RPUSD3-205ENST00000427174 MTUS2Q5JR59 1369 aa34.04■■■■□ 3.04
RPUSD3-205ENST00000427174 CFAP74Q9C0B2 1584 aa34.02■■■■□ 3.04
RPUSD3-205ENST00000427174 PREX2Q70Z35 1606 aa34.02■■■■□ 3.04
RPUSD3-205ENST00000427174 PHLDB1Q86UU1 1377 aa34■■■■□ 3.03
RPUSD3-205ENST00000427174 FANCAO15360 1455 aa33.99■■■■□ 3.03
RPUSD3-205ENST00000427174 LRRC9Q6ZRR7 1453 aa33.99■■■■□ 3.03
RPUSD3-205ENST00000427174 SUPT6HQ7KZ85 1726 aaKnown RBP33.96■■■■□ 3.03
RPUSD3-205ENST00000427174 AKNAQ7Z591 1439 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms