RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-208ENST00000425237 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
NEK6-208ENST00000425237 JPH4Q96JJ6 628 aa18.75■□□□□ 0.59
NEK6-208ENST00000425237 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
NEK6-208ENST00000425237 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
NEK6-208ENST00000425237 IQGAP2Q13576 1575 aa18.71■□□□□ 0.59
NEK6-208ENST00000425237 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
NEK6-208ENST00000425237 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
NEK6-208ENST00000425237 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
NEK6-208ENST00000425237 RIMBP3Q9UFD9 1639 aa18.68■□□□□ 0.58
NEK6-208ENST00000425237 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
NEK6-208ENST00000425237 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
NEK6-208ENST00000425237 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
NEK6-208ENST00000425237 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
NEK6-208ENST00000425237 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
NEK6-208ENST00000425237 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
NEK6-208ENST00000425237 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
NEK6-208ENST00000425237 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
NEK6-208ENST00000425237 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
NEK6-208ENST00000425237 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
NEK6-208ENST00000425237 EFCAB5A4FU69 1503 aa18.52■□□□□ 0.56
NEK6-208ENST00000425237 KIAA0556O60303 1618 aa18.52■□□□□ 0.55
NEK6-208ENST00000425237 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
NEK6-208ENST00000425237 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
NEK6-208ENST00000425237 PTPRGP23470 1445 aa18.49■□□□□ 0.55
NEK6-208ENST00000425237 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
NEK6-208ENST00000425237 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
NEK6-208ENST00000425237 CLIP1P30622 1438 aa18.48■□□□□ 0.55
NEK6-208ENST00000425237 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
NEK6-208ENST00000425237 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
NEK6-208ENST00000425237 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
NEK6-208ENST00000425237 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
NEK6-208ENST00000425237 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
NEK6-208ENST00000425237 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
NEK6-208ENST00000425237 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
NEK6-208ENST00000425237 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.53
NEK6-208ENST00000425237 ABCA8O94911 1581 aa18.32■□□□□ 0.52
NEK6-208ENST00000425237 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
NEK6-208ENST00000425237 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
NEK6-208ENST00000425237 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.52
NEK6-208ENST00000425237 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
NEK6-208ENST00000425237 RAPGEF6Q8TEU7 1601 aa18.25■□□□□ 0.51
NEK6-208ENST00000425237 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
NEK6-208ENST00000425237 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
NEK6-208ENST00000425237 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
NEK6-208ENST00000425237 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
NEK6-208ENST00000425237 ATP10BO94823 1461 aa18.2■□□□□ 0.5
NEK6-208ENST00000425237 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
NEK6-208ENST00000425237 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
NEK6-208ENST00000425237 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
NEK6-208ENST00000425237 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
NEK6-208ENST00000425237 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
NEK6-208ENST00000425237 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
NEK6-208ENST00000425237 MAPKBP1O60336 1514 aa18.14■□□□□ 0.49
NEK6-208ENST00000425237 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
NEK6-208ENST00000425237 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
NEK6-208ENST00000425237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
NEK6-208ENST00000425237 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
NEK6-208ENST00000425237 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
NEK6-208ENST00000425237 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
NEK6-208ENST00000425237 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
NEK6-208ENST00000425237 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
NEK6-208ENST00000425237 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
NEK6-208ENST00000425237 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
NEK6-208ENST00000425237 APLP2Q06481 763 aa18.04■□□□□ 0.48
NEK6-208ENST00000425237 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
NEK6-208ENST00000425237 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
NEK6-208ENST00000425237 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
NEK6-208ENST00000425237 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
NEK6-208ENST00000425237 TIAM1Q13009 1591 aa18■□□□□ 0.47
NEK6-208ENST00000425237 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
NEK6-208ENST00000425237 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
NEK6-208ENST00000425237 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
NEK6-208ENST00000425237 MAGI3Q5TCQ9 1506 aa17.97■□□□□ 0.47
NEK6-208ENST00000425237 GLI2P10070 1586 aa17.96■□□□□ 0.47
NEK6-208ENST00000425237 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
NEK6-208ENST00000425237 DIP2BQ9P265 1576 aa17.96■□□□□ 0.46
NEK6-208ENST00000425237 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
NEK6-208ENST00000425237 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
NEK6-208ENST00000425237 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
NEK6-208ENST00000425237 KIF14Q15058 1648 aa17.9■□□□□ 0.46
NEK6-208ENST00000425237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.89■□□□□ 0.45
NEK6-208ENST00000425237 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
NEK6-208ENST00000425237 ABCA9Q8IUA7 1624 aa17.88■□□□□ 0.45
NEK6-208ENST00000425237 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
NEK6-208ENST00000425237 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
NEK6-208ENST00000425237 PLCH2O75038 1416 aa17.84■□□□□ 0.45
NEK6-208ENST00000425237 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.45
NEK6-208ENST00000425237 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
NEK6-208ENST00000425237 SUPT6HQ7KZ85 1726 aaKnown RBP17.82■□□□□ 0.44
NEK6-208ENST00000425237 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
NEK6-208ENST00000425237 GPATCH8Q9UKJ3 1502 aaKnown RBP17.81■□□□□ 0.44
NEK6-208ENST00000425237 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
NEK6-208ENST00000425237 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
NEK6-208ENST00000425237 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
NEK6-208ENST00000425237 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
NEK6-208ENST00000425237 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
NEK6-208ENST00000425237 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
NEK6-208ENST00000425237 NEO1Q92859 1461 aa17.75■□□□□ 0.43
NEK6-208ENST00000425237 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
NEK6-208ENST00000425237 FANCAO15360 1455 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms