RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
SCN7A-203ENST00000424326 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
SCN7A-203ENST00000424326 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
SCN7A-203ENST00000424326 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
SCN7A-203ENST00000424326 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
SCN7A-203ENST00000424326 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
SCN7A-203ENST00000424326 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
SCN7A-203ENST00000424326 KIF21BO75037 1637 aa10.83□□□□□ -0.68
SCN7A-203ENST00000424326 RAD54L2Q9Y4B4 1467 aa10.82□□□□□ -0.68
SCN7A-203ENST00000424326 POLR3GLQ9BT43 218 aa10.82□□□□□ -0.68
SCN7A-203ENST00000424326 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
SCN7A-203ENST00000424326 NESP48681 1621 aa10.82□□□□□ -0.68
SCN7A-203ENST00000424326 CUX1P39880 1505 aa10.81□□□□□ -0.68
SCN7A-203ENST00000424326 NEFLP07196 543 aa10.81□□□□□ -0.68
SCN7A-203ENST00000424326 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
SCN7A-203ENST00000424326 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
SCN7A-203ENST00000424326 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
SCN7A-203ENST00000424326 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
SCN7A-203ENST00000424326 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
SCN7A-203ENST00000424326 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
SCN7A-203ENST00000424326 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
SCN7A-203ENST00000424326 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
SCN7A-203ENST00000424326 POLA1P09884 1462 aaPredicted RBP10.78□□□□□ -0.68
SCN7A-203ENST00000424326 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
SCN7A-203ENST00000424326 ZNF326Q5BKZ1 582 aaKnown RBP10.75□□□□□ -0.69
SCN7A-203ENST00000424326 CCDC18Q5T9S5 1454 aa10.75□□□□□ -0.69
SCN7A-203ENST00000424326 FHOD3Q2V2M9 1422 aa10.74□□□□□ -0.69
SCN7A-203ENST00000424326 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCN7A-203ENST00000424326 PRXQ9BXM0 1461 aa10.73□□□□□ -0.69
SCN7A-203ENST00000424326 RSPH4AQ5TD94 716 aa10.72□□□□□ -0.69
SCN7A-203ENST00000424326 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
SCN7A-203ENST00000424326 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
SCN7A-203ENST00000424326 ANP32CO43423 234 aa10.71□□□□□ -0.69
SCN7A-203ENST00000424326 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
SCN7A-203ENST00000424326 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.69
SCN7A-203ENST00000424326 PTPRGP23470 1445 aa10.71□□□□□ -0.69
SCN7A-203ENST00000424326 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.7
SCN7A-203ENST00000424326 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
SCN7A-203ENST00000424326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCN7A-203ENST00000424326 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
SCN7A-203ENST00000424326 EFCAB2Q5VUJ9 269 aa10.69□□□□□ -0.7
SCN7A-203ENST00000424326 CUL7Q14999 1698 aa10.68□□□□□ -0.7
SCN7A-203ENST00000424326 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
SCN7A-203ENST00000424326 DNAJC5BQ9UF47 199 aa10.67□□□□□ -0.7
SCN7A-203ENST00000424326 KANK4Q5T7N3 995 aaPredicted RBP10.66□□□□□ -0.7
SCN7A-203ENST00000424326 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
SCN7A-203ENST00000424326 BCANQ96GW7 911 aa10.66□□□□□ -0.7
SCN7A-203ENST00000424326 KANK1Q14678 1352 aa10.65□□□□□ -0.7
SCN7A-203ENST00000424326 CASKIN1Q8WXD9 1431 aa10.65□□□□□ -0.7
SCN7A-203ENST00000424326 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
SCN7A-203ENST00000424326 ANKRD30AQ9BXX3 1397 aa10.64□□□□□ -0.71
SCN7A-203ENST00000424326 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
SCN7A-203ENST00000424326 SNAPC4Q5SXM2 1469 aa10.63□□□□□ -0.71
SCN7A-203ENST00000424326 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
SCN7A-203ENST00000424326 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
SCN7A-203ENST00000424326 KIAA0586Q9BVV6 1533 aa10.61□□□□□ -0.71
SCN7A-203ENST00000424326 SYNJ2O15056 1496 aa10.6□□□□□ -0.71
SCN7A-203ENST00000424326 EIF4G2P78344 907 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCN7A-203ENST00000424326 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
SCN7A-203ENST00000424326 PRG4Q92954 1404 aaPredicted RBP10.56□□□□□ -0.72
SCN7A-203ENST00000424326 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
SCN7A-203ENST00000424326 LRRC9Q6ZRR7 1453 aa10.55□□□□□ -0.72
SCN7A-203ENST00000424326 IQGAP2Q13576 1575 aa10.54□□□□□ -0.72
SCN7A-203ENST00000424326 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
SCN7A-203ENST00000424326 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
SCN7A-203ENST00000424326 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
SCN7A-203ENST00000424326 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
SCN7A-203ENST00000424326 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
SCN7A-203ENST00000424326 GRIN2AQ12879 1464 aa10.53□□□□□ -0.72
SCN7A-203ENST00000424326 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
SCN7A-203ENST00000424326 NEFMP07197 916 aa10.53□□□□□ -0.72
SCN7A-203ENST00000424326 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
SCN7A-203ENST00000424326 SPAG9O60271 1321 aaKnown RBP10.52□□□□□ -0.72
SCN7A-203ENST00000424326 HDGFP51858 240 aaKnown RBP10.52□□□□□ -0.73
SCN7A-203ENST00000424326 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.73
SCN7A-203ENST00000424326 EHBP1L1Q8N3D4 1523 aa10.51□□□□□ -0.73
SCN7A-203ENST00000424326 PPP1R15AO75807 674 aaPredicted RBP10.51□□□□□ -0.73
SCN7A-203ENST00000424326 WDR97A6NE52 1622 aa10.5□□□□□ -0.73
SCN7A-203ENST00000424326 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
SCN7A-203ENST00000424326 MAP3K1Q13233 1512 aa10.49□□□□□ -0.73
SCN7A-203ENST00000424326 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
SCN7A-203ENST00000424326 NUP155O75694 1391 aa10.48□□□□□ -0.73
SCN7A-203ENST00000424326 WDR62O43379 1518 aa10.48□□□□□ -0.73
SCN7A-203ENST00000424326 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCN7A-203ENST00000424326 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
SCN7A-203ENST00000424326 NCOA2Q15596 1464 aa10.47□□□□□ -0.73
SCN7A-203ENST00000424326 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
SCN7A-203ENST00000424326 PLEKHH2Q8IVE3 1493 aa10.47□□□□□ -0.73
SCN7A-203ENST00000424326 PKD2Q13563 968 aa10.46□□□□□ -0.73
SCN7A-203ENST00000424326 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
SCN7A-203ENST00000424326 RGL3Q3MIN7 710 aa10.45□□□□□ -0.74
SCN7A-203ENST00000424326 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
SCN7A-203ENST00000424326 DDX10Q13206 875 aaKnown RBP10.45□□□□□ -0.74
SCN7A-203ENST00000424326 CYB5RLQ6IPT4 315 aa10.45□□□□□ -0.74
SCN7A-203ENST00000424326 CARD11Q9BXL7 1154 aa10.45□□□□□ -0.74
SCN7A-203ENST00000424326 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
SCN7A-203ENST00000424326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCN7A-203ENST00000424326 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
SCN7A-203ENST00000424326 ZNF608Q9ULD9 1512 aaPredicted RBP10.44□□□□□ -0.74
SCN7A-203ENST00000424326 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms