RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
GTF3C2-204ENST00000423998 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
GTF3C2-204ENST00000423998 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
GTF3C2-204ENST00000423998 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
GTF3C2-204ENST00000423998 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
GTF3C2-204ENST00000423998 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
GTF3C2-204ENST00000423998 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
GTF3C2-204ENST00000423998 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
GTF3C2-204ENST00000423998 IQGAP2Q13576 1575 aa22.57■■□□□ 1.2
GTF3C2-204ENST00000423998 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
GTF3C2-204ENST00000423998 KIF21BO75037 1637 aa22.5■■□□□ 1.19
GTF3C2-204ENST00000423998 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
GTF3C2-204ENST00000423998 ARAP1Q96P48 1450 aa22.49■■□□□ 1.19
GTF3C2-204ENST00000423998 UGGT2Q9NYU1 1516 aa22.46■■□□□ 1.19
GTF3C2-204ENST00000423998 TNIKQ9UKE5 1360 aa22.45■■□□□ 1.18
GTF3C2-204ENST00000423998 CTTNBP2Q8WZ74 1663 aa22.45■■□□□ 1.18
GTF3C2-204ENST00000423998 NPM1P06748 294 aaKnown RBP eCLIP22.44■■□□□ 1.18
GTF3C2-204ENST00000423998 PTPRGP23470 1445 aa22.43■■□□□ 1.18
GTF3C2-204ENST00000423998 ERCC6L2Q5T890 1561 aa22.37■■□□□ 1.17
GTF3C2-204ENST00000423998 DISP1Q96F81 1524 aa22.34■■□□□ 1.17
GTF3C2-204ENST00000423998 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
GTF3C2-204ENST00000423998 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
GTF3C2-204ENST00000423998 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
GTF3C2-204ENST00000423998 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
GTF3C2-204ENST00000423998 UACAQ9BZF9 1416 aa22.25■■□□□ 1.15
GTF3C2-204ENST00000423998 EFCAB5A4FU69 1503 aa22.25■■□□□ 1.15
GTF3C2-204ENST00000423998 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
GTF3C2-204ENST00000423998 UHRF1BP1LA0JNW5 1464 aa22.22■■□□□ 1.15
GTF3C2-204ENST00000423998 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
GTF3C2-204ENST00000423998 SAMD9Q5K651 1589 aa22.18■■□□□ 1.14
GTF3C2-204ENST00000423998 ABCC2Q92887 1545 aa22.15■■□□□ 1.14
GTF3C2-204ENST00000423998 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
GTF3C2-204ENST00000423998 ADCY10Q96PN6 1610 aa22.1■■□□□ 1.13
GTF3C2-204ENST00000423998 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.12
GTF3C2-204ENST00000423998 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
GTF3C2-204ENST00000423998 KDM5BQ9UGL1 1544 aa22.07■■□□□ 1.12
GTF3C2-204ENST00000423998 CLIP1P30622 1438 aa22.06■■□□□ 1.12
GTF3C2-204ENST00000423998 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
GTF3C2-204ENST00000423998 ABCA8O94911 1581 aa22.04■■□□□ 1.12
GTF3C2-204ENST00000423998 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
GTF3C2-204ENST00000423998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
GTF3C2-204ENST00000423998 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
GTF3C2-204ENST00000423998 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
GTF3C2-204ENST00000423998 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
GTF3C2-204ENST00000423998 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
GTF3C2-204ENST00000423998 FAM69CQ0P6D2 419 aa21.99■■□□□ 1.11
GTF3C2-204ENST00000423998 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
GTF3C2-204ENST00000423998 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
GTF3C2-204ENST00000423998 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
GTF3C2-204ENST00000423998 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
GTF3C2-204ENST00000423998 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
GTF3C2-204ENST00000423998 ATP10BO94823 1461 aa21.92■■□□□ 1.1
GTF3C2-204ENST00000423998 ZCCHC11Q5TAX3 1644 aaKnown RBP21.91■■□□□ 1.1
GTF3C2-204ENST00000423998 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
GTF3C2-204ENST00000423998 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.09
GTF3C2-204ENST00000423998 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
GTF3C2-204ENST00000423998 KCNH8Q96L42 1107 aa21.88■■□□□ 1.09
GTF3C2-204ENST00000423998 CASKIN1Q8WXD9 1431 aa21.88■■□□□ 1.09
GTF3C2-204ENST00000423998 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
GTF3C2-204ENST00000423998 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.09
GTF3C2-204ENST00000423998 GLI2P10070 1586 aa21.83■■□□□ 1.09
GTF3C2-204ENST00000423998 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.08
GTF3C2-204ENST00000423998 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
GTF3C2-204ENST00000423998 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
GTF3C2-204ENST00000423998 APLP2Q06481 763 aa21.76■■□□□ 1.07
GTF3C2-204ENST00000423998 TEX14Q8IWB6 1497 aa21.76■■□□□ 1.07
GTF3C2-204ENST00000423998 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
GTF3C2-204ENST00000423998 KIF13AQ9H1H9 1805 aa21.74■■□□□ 1.07
GTF3C2-204ENST00000423998 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
GTF3C2-204ENST00000423998 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
GTF3C2-204ENST00000423998 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
GTF3C2-204ENST00000423998 TROQ12816 1431 aaPredicted RBP21.69■■□□□ 1.06
GTF3C2-204ENST00000423998 CDK13Q14004 1512 aaKnown RBP21.69■■□□□ 1.06
GTF3C2-204ENST00000423998 CFAP43Q8NDM7 1665 aa21.68■■□□□ 1.06
GTF3C2-204ENST00000423998 MAGI3Q5TCQ9 1506 aa21.66■■□□□ 1.06
GTF3C2-204ENST00000423998 MAP3K4Q9Y6R4 1608 aa21.65■■□□□ 1.06
GTF3C2-204ENST00000423998 MTUS2Q5JR59 1369 aa21.64■■□□□ 1.06
GTF3C2-204ENST00000423998 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
GTF3C2-204ENST00000423998 KIF14Q15058 1648 aa21.59■■□□□ 1.05
GTF3C2-204ENST00000423998 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
GTF3C2-204ENST00000423998 TSPOAP1O95153 1857 aa21.58■■□□□ 1.05
GTF3C2-204ENST00000423998 MAP3K1Q13233 1512 aa21.57■■□□□ 1.04
GTF3C2-204ENST00000423998 NEO1Q92859 1461 aa21.56■■□□□ 1.04
GTF3C2-204ENST00000423998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.55■■□□□ 1.046e-7■□□□□ 11.1
GTF3C2-204ENST00000423998 PLCH2O75038 1416 aa21.55■■□□□ 1.04
GTF3C2-204ENST00000423998 ARAP3Q8WWN8 1544 aa21.51■■□□□ 1.03
GTF3C2-204ENST00000423998 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
GTF3C2-204ENST00000423998 KDM6BO15054 1643 aa21.5■■□□□ 1.03
GTF3C2-204ENST00000423998 FANCAO15360 1455 aa21.5■■□□□ 1.03
GTF3C2-204ENST00000423998 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
GTF3C2-204ENST00000423998 CCNB3Q8WWL7 1395 aa21.49■■□□□ 1.03
GTF3C2-204ENST00000423998 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
GTF3C2-204ENST00000423998 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
GTF3C2-204ENST00000423998 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
GTF3C2-204ENST00000423998 PPRC1Q5VV67 1664 aaKnown RBP21.46■■□□□ 1.03
GTF3C2-204ENST00000423998 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
GTF3C2-204ENST00000423998 LRRC9Q6ZRR7 1453 aa21.44■■□□□ 1.02
GTF3C2-204ENST00000423998 TTC37Q6PGP7 1564 aa21.44■■□□□ 1.02
GTF3C2-204ENST00000423998 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
GTF3C2-204ENST00000423998 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms