RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 ACIN1Q9UKV3 1341 aaKnown RBP38.09■■■■□ 3.69
ITGA9-203ENST00000422441 WDR97A6NE52 1622 aa38.08■■■■□ 3.69
ITGA9-203ENST00000422441 P3H3Q8IVL6 736 aa38.05■■■■□ 3.68
ITGA9-203ENST00000422441 PCF11O94913 1555 aaKnown RBP38.05■■■■□ 3.68
ITGA9-203ENST00000422441 EFCAB5A4FU69 1503 aa38.03■■■■□ 3.68
ITGA9-203ENST00000422441 CFAP43Q8NDM7 1665 aa38.03■■■■□ 3.68
ITGA9-203ENST00000422441 NEUROD1Q13562 356 aa38.03■■■■□ 3.68
ITGA9-203ENST00000422441 CTTNBP2Q8WZ74 1663 aa38■■■■□ 3.67
ITGA9-203ENST00000422441 FHOD3Q2V2M9 1422 aa38■■■■□ 3.67
ITGA9-203ENST00000422441 PDS5BQ9NTI5 1447 aa37.98■■■■□ 3.67
ITGA9-203ENST00000422441 ITGAEP38570 1179 aa37.97■■■■□ 3.67
ITGA9-203ENST00000422441 PHLDB1Q86UU1 1377 aa37.95■■■■□ 3.67
ITGA9-203ENST00000422441 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
ITGA9-203ENST00000422441 ABCA5Q8WWZ7 1642 aa37.94■■■■□ 3.66
ITGA9-203ENST00000422441 CENPBP07199 599 aaPredicted RBP37.93■■■■□ 3.66
ITGA9-203ENST00000422441 FYCO1Q9BQS8 1478 aa37.92■■■■□ 3.66
ITGA9-203ENST00000422441 TDRD9Q8NDG6 1382 aaKnown RBP37.9■■■■□ 3.66
ITGA9-203ENST00000422441 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.66
ITGA9-203ENST00000422441 CASKIN1Q8WXD9 1431 aa37.89■■■■□ 3.66
ITGA9-203ENST00000422441 GAPVD1Q14C86 1478 aa37.85■■■■□ 3.65
ITGA9-203ENST00000422441 ATP1B4Q9UN42 357 aaPredicted RBP37.85■■■■□ 3.65
ITGA9-203ENST00000422441 RAB3GAP2Q9H2M9 1393 aa37.84■■■■□ 3.65
ITGA9-203ENST00000422441 KIF21AQ7Z4S6 1674 aa37.84■■■■□ 3.65
ITGA9-203ENST00000422441 MIER1Q8N108 512 aa37.82■■■■□ 3.65
ITGA9-203ENST00000422441 FMN1Q68DA7 1419 aa37.76■■■■□ 3.64
ITGA9-203ENST00000422441 SETD5Q9C0A6 1442 aa37.75■■■■□ 3.63
ITGA9-203ENST00000422441 FAM50AQ14320 339 aaKnown RBP37.72■■■■□ 3.63
ITGA9-203ENST00000422441 SAMD9Q5K651 1589 aa37.71■■■■□ 3.63
ITGA9-203ENST00000422441 SNAPC4Q5SXM2 1469 aa37.7■■■■□ 3.63
ITGA9-203ENST00000422441 TARBP1Q13395 1621 aaKnown RBP37.69■■■■□ 3.62
ITGA9-203ENST00000422441 MAPKBP1O60336 1514 aa37.67■■■■□ 3.62
ITGA9-203ENST00000422441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.62■■■■□ 3.61
ITGA9-203ENST00000422441 GTF3C3Q9Y5Q9 886 aa37.57■■■■□ 3.61
ITGA9-203ENST00000422441 YTHDC1Q96MU7 727 aaKnown RBP37.54■■■■□ 3.6
ITGA9-203ENST00000422441 LRRIQ1Q96JM4 1722 aa37.51■■■■□ 3.6
ITGA9-203ENST00000422441 GRIN2BQ13224 1484 aa37.51■■■■□ 3.6
ITGA9-203ENST00000422441 FGD6Q6ZV73 1430 aa37.49■■■■□ 3.59
ITGA9-203ENST00000422441 MTUS2Q5JR59 1369 aa37.48■■■■□ 3.59
ITGA9-203ENST00000422441 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
ITGA9-203ENST00000422441 THOC2Q8NI27 1593 aaKnown RBP37.45■■■■□ 3.59
ITGA9-203ENST00000422441 MRC2Q9UBG0 1479 aa37.42■■■■□ 3.58
ITGA9-203ENST00000422441 NCOA2Q15596 1464 aa37.35■■■■□ 3.57
ITGA9-203ENST00000422441 ADAMTS12P58397 1594 aa37.34■■■■□ 3.57
ITGA9-203ENST00000422441 SIN3AQ96ST3 1273 aa37.31■■■■□ 3.56
ITGA9-203ENST00000422441 EHBP1L1Q8N3D4 1523 aa37.3■■■■□ 3.56
ITGA9-203ENST00000422441 SUPT6HQ7KZ85 1726 aaKnown RBP37.3■■■■□ 3.56
ITGA9-203ENST00000422441 MYOM3Q5VTT5 1437 aa37.29■■■■□ 3.56
ITGA9-203ENST00000422441 IQGAP2Q13576 1575 aa37.28■■■■□ 3.56
ITGA9-203ENST00000422441 PTPRKQ15262 1439 aa37.26■■■■□ 3.56
ITGA9-203ENST00000422441 CCDC18Q5T9S5 1454 aa37.23■■■■□ 3.55
ITGA9-203ENST00000422441 TIMELESSQ9UNS1 1208 aa37.23■■■■□ 3.55
ITGA9-203ENST00000422441 MAGI3Q5TCQ9 1506 aa37.21■■■■□ 3.55
ITGA9-203ENST00000422441 ARHGEF11O15085 1522 aa37.21■■■■□ 3.55
ITGA9-203ENST00000422441 HFM1A2PYH4 1435 aa37.21■■■■□ 3.55
ITGA9-203ENST00000422441 UGGT2Q9NYU1 1516 aa37.2■■■■□ 3.55
ITGA9-203ENST00000422441 IFT140Q96RY7 1462 aa37.18■■■■□ 3.54
ITGA9-203ENST00000422441 HECW1Q76N89 1606 aa37.17■■■■□ 3.54
ITGA9-203ENST00000422441 PTPN23Q9H3S7 1636 aa37.15■■■■□ 3.54
ITGA9-203ENST00000422441 WDR62O43379 1518 aa37.14■■■■□ 3.54
ITGA9-203ENST00000422441 ZNF608Q9ULD9 1512 aaPredicted RBP37.14■■■■□ 3.54
ITGA9-203ENST00000422441 PELP1Q8IZL8 1130 aaKnown RBP37.11■■■■□ 3.53
ITGA9-203ENST00000422441 EPRSP07814 1512 aaKnown RBP37.1■■■■□ 3.53
ITGA9-203ENST00000422441 NAIPQ13075 1403 aa37.09■■■■□ 3.53
ITGA9-203ENST00000422441 UACAQ9BZF9 1416 aa37.08■■■■□ 3.53
ITGA9-203ENST00000422441 PPP1R15AO75807 674 aaPredicted RBP37.03■■■■□ 3.52
ITGA9-203ENST00000422441 TCOF1Q13428 1488 aaKnown RBP37.03■■■■□ 3.52
ITGA9-203ENST00000422441 CDK13Q14004 1512 aaKnown RBP36.99■■■■□ 3.51
ITGA9-203ENST00000422441 KIAA0586Q9BVV6 1533 aa36.97■■■■□ 3.51
ITGA9-203ENST00000422441 DISP1Q96F81 1524 aa36.91■■■■□ 3.5
ITGA9-203ENST00000422441 EIF4G3O43432 1585 aaKnown RBP36.89■■■■□ 3.5
ITGA9-203ENST00000422441 KIAA0556O60303 1618 aa36.89■■■■□ 3.5
ITGA9-203ENST00000422441 MIA2Q96PC5 1412 aa36.89■■■■□ 3.5
ITGA9-203ENST00000422441 GRIN2AQ12879 1464 aa36.88■■■■□ 3.49
ITGA9-203ENST00000422441 TONSLQ96HA7 1378 aa36.87■■■■□ 3.49
ITGA9-203ENST00000422441 ARID3CA6NKF2 412 aa36.84■■■■□ 3.49
ITGA9-203ENST00000422441 GCC2Q8IWJ2 1684 aa36.84■■■■□ 3.49
ITGA9-203ENST00000422441 RRP7BPQ9NSQ0 103 aa36.83■■■■□ 3.49
ITGA9-203ENST00000422441 AKNAQ7Z591 1439 aa36.82■■■■□ 3.49
ITGA9-203ENST00000422441 CHIC2Q9UKJ5 165 aa36.82■■■■□ 3.48
ITGA9-203ENST00000422441 DDX10Q13206 875 aaKnown RBP36.8■■■■□ 3.48
ITGA9-203ENST00000422441 ERCC6Q03468 1493 aa36.77■■■■□ 3.48
ITGA9-203ENST00000422441 NUP153P49790 1475 aaKnown RBP36.76■■■■□ 3.47
ITGA9-203ENST00000422441 RAPGEF6Q8TEU7 1601 aa36.73■■■■□ 3.47
ITGA9-203ENST00000422441 MAGI1Q96QZ7 1491 aaPredicted RBP36.72■■■■□ 3.47
ITGA9-203ENST00000422441 HIRIP3Q9BW71 556 aaPredicted RBP36.71■■■■□ 3.47
ITGA9-203ENST00000422441 KDM6BO15054 1643 aa36.7■■■■□ 3.47
ITGA9-203ENST00000422441 DENND4BO75064 1496 aaPredicted RBP36.69■■■■□ 3.46
ITGA9-203ENST00000422441 KCNH8Q96L42 1107 aa36.68■■■■□ 3.46
ITGA9-203ENST00000422441 KDM5BQ9UGL1 1544 aa36.67■■■■□ 3.46
ITGA9-203ENST00000422441 SYNJ2O15056 1496 aa36.64■■■■□ 3.46
ITGA9-203ENST00000422441 CEP170Q5SW79 1584 aa36.64■■■■□ 3.46
ITGA9-203ENST00000422441 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
ITGA9-203ENST00000422441 TRIM52Q96A61 297 aa36.62■■■■□ 3.45
ITGA9-203ENST00000422441 CDK11AQ9UQ88 783 aaPredicted RBP36.6■■■■□ 3.45
ITGA9-203ENST00000422441 DAPK1P53355 1430 aa36.6■■■■□ 3.45
ITGA9-203ENST00000422441 ROCK1Q13464 1354 aa36.58■■■■□ 3.45
ITGA9-203ENST00000422441 DNMT1P26358 1616 aaKnown RBP36.56■■■■□ 3.44
ITGA9-203ENST00000422441 MPHOSPH9Q99550 1183 aa36.55■■■■□ 3.44
ITGA9-203ENST00000422441 ABCC5O15440 1437 aa36.55■■■■□ 3.44
ITGA9-203ENST00000422441 ZNF644Q9H582 1327 aaPredicted RBP36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms