RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
LINC00472-202ENST00000421704 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
LINC00472-202ENST00000421704 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
LINC00472-202ENST00000421704 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
LINC00472-202ENST00000421704 APLP2Q06481 763 aa23.77■■□□□ 1.4
LINC00472-202ENST00000421704 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
LINC00472-202ENST00000421704 SAMD9Q5K651 1589 aa23.77■■□□□ 1.4
LINC00472-202ENST00000421704 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
LINC00472-202ENST00000421704 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
LINC00472-202ENST00000421704 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
LINC00472-202ENST00000421704 UGGT2Q9NYU1 1516 aa23.71■■□□□ 1.39
LINC00472-202ENST00000421704 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
LINC00472-202ENST00000421704 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
LINC00472-202ENST00000421704 NUP160Q12769 1436 aa23.68■■□□□ 1.38
LINC00472-202ENST00000421704 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
LINC00472-202ENST00000421704 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
LINC00472-202ENST00000421704 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
LINC00472-202ENST00000421704 FHOD3Q2V2M9 1422 aa23.58■■□□□ 1.36
LINC00472-202ENST00000421704 CHD1O14646 1710 aa23.56■■□□□ 1.36
LINC00472-202ENST00000421704 FBLN2P98095 1184 aa23.56■■□□□ 1.36
LINC00472-202ENST00000421704 KIAA0556O60303 1618 aa23.54■■□□□ 1.36
LINC00472-202ENST00000421704 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
LINC00472-202ENST00000421704 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
LINC00472-202ENST00000421704 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
LINC00472-202ENST00000421704 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
LINC00472-202ENST00000421704 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
LINC00472-202ENST00000421704 P3H3Q8IVL6 736 aa23.48■■□□□ 1.35
LINC00472-202ENST00000421704 DISP1Q96F81 1524 aa23.48■■□□□ 1.35
LINC00472-202ENST00000421704 HECW1Q76N89 1606 aa23.45■■□□□ 1.34
LINC00472-202ENST00000421704 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
LINC00472-202ENST00000421704 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
LINC00472-202ENST00000421704 SHROOM2Q13796 1616 aa23.4■■□□□ 1.34
LINC00472-202ENST00000421704 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
LINC00472-202ENST00000421704 PPARGC1BQ86YN6 1023 aaKnown RBP23.38■■□□□ 1.33
LINC00472-202ENST00000421704 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
LINC00472-202ENST00000421704 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.32
LINC00472-202ENST00000421704 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
LINC00472-202ENST00000421704 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
LINC00472-202ENST00000421704 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
LINC00472-202ENST00000421704 KANK4Q5T7N3 995 aaPredicted RBP23.28■■□□□ 1.32
LINC00472-202ENST00000421704 LRRIQ1Q96JM4 1722 aa23.27■■□□□ 1.32
LINC00472-202ENST00000421704 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
LINC00472-202ENST00000421704 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
LINC00472-202ENST00000421704 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
LINC00472-202ENST00000421704 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
LINC00472-202ENST00000421704 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
LINC00472-202ENST00000421704 ABCA8O94911 1581 aa23.2■■□□□ 1.3
LINC00472-202ENST00000421704 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
LINC00472-202ENST00000421704 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
LINC00472-202ENST00000421704 PTPRGP23470 1445 aa23.17■■□□□ 1.3
LINC00472-202ENST00000421704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.29
LINC00472-202ENST00000421704 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
LINC00472-202ENST00000421704 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
LINC00472-202ENST00000421704 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
LINC00472-202ENST00000421704 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
LINC00472-202ENST00000421704 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
LINC00472-202ENST00000421704 UACAQ9BZF9 1416 aa23.08■■□□□ 1.29
LINC00472-202ENST00000421704 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
LINC00472-202ENST00000421704 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
LINC00472-202ENST00000421704 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
LINC00472-202ENST00000421704 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
LINC00472-202ENST00000421704 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
LINC00472-202ENST00000421704 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
LINC00472-202ENST00000421704 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
LINC00472-202ENST00000421704 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
LINC00472-202ENST00000421704 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
LINC00472-202ENST00000421704 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
LINC00472-202ENST00000421704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
LINC00472-202ENST00000421704 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
LINC00472-202ENST00000421704 ATP10BO94823 1461 aa22.98■■□□□ 1.27
LINC00472-202ENST00000421704 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
LINC00472-202ENST00000421704 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
LINC00472-202ENST00000421704 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
LINC00472-202ENST00000421704 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
LINC00472-202ENST00000421704 KIF14Q15058 1648 aa22.94■■□□□ 1.26
LINC00472-202ENST00000421704 HRCP23327 699 aa22.92■■□□□ 1.26
LINC00472-202ENST00000421704 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
LINC00472-202ENST00000421704 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
LINC00472-202ENST00000421704 KDM5BQ9UGL1 1544 aa22.88■■□□□ 1.25
LINC00472-202ENST00000421704 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
LINC00472-202ENST00000421704 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
LINC00472-202ENST00000421704 ZCCHC11Q5TAX3 1644 aaKnown RBP22.83■■□□□ 1.25
LINC00472-202ENST00000421704 ABCC10Q5T3U5 1492 aa22.78■■□□□ 1.24
LINC00472-202ENST00000421704 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
LINC00472-202ENST00000421704 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
LINC00472-202ENST00000421704 CCER1Q8TC90 406 aaPredicted RBP22.76■■□□□ 1.23
LINC00472-202ENST00000421704 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
LINC00472-202ENST00000421704 AKNAQ7Z591 1439 aa22.74■■□□□ 1.23
LINC00472-202ENST00000421704 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
LINC00472-202ENST00000421704 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
LINC00472-202ENST00000421704 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
LINC00472-202ENST00000421704 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
LINC00472-202ENST00000421704 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
LINC00472-202ENST00000421704 ITGAEP38570 1179 aa22.69■■□□□ 1.22
LINC00472-202ENST00000421704 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
LINC00472-202ENST00000421704 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
LINC00472-202ENST00000421704 HFM1A2PYH4 1435 aa22.67■■□□□ 1.22
LINC00472-202ENST00000421704 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
LINC00472-202ENST00000421704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
LINC00472-202ENST00000421704 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms