RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 CUL7Q14999 1698 aa32.12■■■□□ 2.73
LEMD2-202ENST00000421671 TDRD9Q8NDG6 1382 aaKnown RBP32.11■■■□□ 2.73
LEMD2-202ENST00000421671 RRBP1Q9P2E9 1410 aaKnown RBP32.1■■■□□ 2.73
LEMD2-202ENST00000421671 TIAM1Q13009 1591 aa32.05■■■□□ 2.72
LEMD2-202ENST00000421671 MAP3K1Q13233 1512 aa32.04■■■□□ 2.72
LEMD2-202ENST00000421671 ABCA5Q8WWZ7 1642 aa32.02■■■□□ 2.72
LEMD2-202ENST00000421671 CTTNBP2Q8WZ74 1663 aa32■■■□□ 2.71
LEMD2-202ENST00000421671 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.71
LEMD2-202ENST00000421671 ZNF316A6NFI3 1004 aaPredicted RBP31.94■■■□□ 2.7
LEMD2-202ENST00000421671 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
LEMD2-202ENST00000421671 PCF11O94913 1555 aaKnown RBP31.94■■■□□ 2.7
LEMD2-202ENST00000421671 CCNB3Q8WWL7 1395 aa31.93■■■□□ 2.7
LEMD2-202ENST00000421671 P3H3Q8IVL6 736 aa31.92■■■□□ 2.7
LEMD2-202ENST00000421671 EFCAB5A4FU69 1503 aa31.92■■■□□ 2.7
LEMD2-202ENST00000421671 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
LEMD2-202ENST00000421671 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
LEMD2-202ENST00000421671 FHOD3Q2V2M9 1422 aa31.9■■■□□ 2.7
LEMD2-202ENST00000421671 LRRC9Q6ZRR7 1453 aa31.9■■■□□ 2.7
LEMD2-202ENST00000421671 CFAP43Q8NDM7 1665 aa31.9■■■□□ 2.7
LEMD2-202ENST00000421671 DHX57Q6P158 1386 aaKnown RBP31.84■■■□□ 2.69
LEMD2-202ENST00000421671 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.682e-6■■■■■ 33.7
LEMD2-202ENST00000421671 FYCO1Q9BQS8 1478 aa31.78■■■□□ 2.68
LEMD2-202ENST00000421671 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
LEMD2-202ENST00000421671 CASKIN1Q8WXD9 1431 aa31.76■■■□□ 2.67
LEMD2-202ENST00000421671 PHLDB1Q86UU1 1377 aa31.75■■■□□ 2.67
LEMD2-202ENST00000421671 CLSPNQ9HAW4 1339 aa31.74■■■□□ 2.67
LEMD2-202ENST00000421671 WDR62O43379 1518 aa31.72■■■□□ 2.67
LEMD2-202ENST00000421671 SAMD9Q5K651 1589 aa31.71■■■□□ 2.67
LEMD2-202ENST00000421671 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.67
LEMD2-202ENST00000421671 YTHDC1Q96MU7 727 aaKnown RBP31.69■■■□□ 2.66
LEMD2-202ENST00000421671 ATP1B4Q9UN42 357 aaPredicted RBP31.68■■■□□ 2.66
LEMD2-202ENST00000421671 ITGAEP38570 1179 aa31.67■■■□□ 2.66
LEMD2-202ENST00000421671 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
LEMD2-202ENST00000421671 SNAPC4Q5SXM2 1469 aa31.66■■■□□ 2.66
LEMD2-202ENST00000421671 FMN1Q68DA7 1419 aa31.65■■■□□ 2.66
LEMD2-202ENST00000421671 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
LEMD2-202ENST00000421671 MIER1Q8N108 512 aa31.59■■■□□ 2.65
LEMD2-202ENST00000421671 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
LEMD2-202ENST00000421671 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
LEMD2-202ENST00000421671 RAB3GAP2Q9H2M9 1393 aa31.55■■■□□ 2.64
LEMD2-202ENST00000421671 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
LEMD2-202ENST00000421671 GRIN2BQ13224 1484 aa31.51■■■□□ 2.64
LEMD2-202ENST00000421671 FAM50AQ14320 339 aaKnown RBP31.49■■■□□ 2.63
LEMD2-202ENST00000421671 SETD5Q9C0A6 1442 aa31.47■■■□□ 2.63
LEMD2-202ENST00000421671 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
LEMD2-202ENST00000421671 MAPKBP1O60336 1514 aa31.42■■■□□ 2.62
LEMD2-202ENST00000421671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.42■■■□□ 2.62
LEMD2-202ENST00000421671 IQGAP2Q13576 1575 aa31.4■■■□□ 2.62
LEMD2-202ENST00000421671 MTUS2Q5JR59 1369 aa31.38■■■□□ 2.61
LEMD2-202ENST00000421671 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
LEMD2-202ENST00000421671 NCOA2Q15596 1464 aa31.3■■■□□ 2.6
LEMD2-202ENST00000421671 EHBP1L1Q8N3D4 1523 aa31.28■■■□□ 2.6
LEMD2-202ENST00000421671 SUPT6HQ7KZ85 1726 aaKnown RBP31.28■■■□□ 2.6
LEMD2-202ENST00000421671 MAGI3Q5TCQ9 1506 aa31.27■■■□□ 2.6
LEMD2-202ENST00000421671 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
LEMD2-202ENST00000421671 HECW1Q76N89 1606 aa31.23■■■□□ 2.59
LEMD2-202ENST00000421671 CCDC18Q5T9S5 1454 aa31.23■■■□□ 2.59
LEMD2-202ENST00000421671 MYOM3Q5VTT5 1437 aa31.22■■■□□ 2.59
LEMD2-202ENST00000421671 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
LEMD2-202ENST00000421671 FBLN2P98095 1184 aa31.21■■■□□ 2.59
LEMD2-202ENST00000421671 GRIN2AQ12879 1464 aa31.2■■■□□ 2.58
LEMD2-202ENST00000421671 PTPRKQ15262 1439 aa31.19■■■□□ 2.58
LEMD2-202ENST00000421671 EPRSP07814 1512 aaKnown RBP31.15■■■□□ 2.58
LEMD2-202ENST00000421671 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
LEMD2-202ENST00000421671 SUPT16HQ9Y5B9 1047 aaKnown RBP31.14■■■□□ 2.58
LEMD2-202ENST00000421671 KIAA0586Q9BVV6 1533 aa31.14■■■□□ 2.58
LEMD2-202ENST00000421671 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
LEMD2-202ENST00000421671 MAGI1Q96QZ7 1491 aaPredicted RBP31.11■■■□□ 2.57
LEMD2-202ENST00000421671 CDK13Q14004 1512 aaKnown RBP31.11■■■□□ 2.57
LEMD2-202ENST00000421671 DISP1Q96F81 1524 aa31.1■■■□□ 2.57
LEMD2-202ENST00000421671 ARID3CA6NKF2 412 aa31.09■■■□□ 2.57
LEMD2-202ENST00000421671 KIAA0556O60303 1618 aa31.09■■■□□ 2.57
LEMD2-202ENST00000421671 HFM1A2PYH4 1435 aa31.08■■■□□ 2.57
LEMD2-202ENST00000421671 SIN3AQ96ST3 1273 aa31.08■■■□□ 2.57
LEMD2-202ENST00000421671 SYNJ2O15056 1496 aa31.07■■■□□ 2.56
LEMD2-202ENST00000421671 ANP32EQ9BTT0 268 aa31.07■■■□□ 2.56
LEMD2-202ENST00000421671 CEP170Q5SW79 1584 aa31.06■■■□□ 2.56
LEMD2-202ENST00000421671 TCOF1Q13428 1488 aaKnown RBP31.02■■■□□ 2.56
LEMD2-202ENST00000421671 NAIPQ13075 1403 aa31■■■□□ 2.55
LEMD2-202ENST00000421671 TSHZ2Q9NRE2 1034 aa30.98■■■□□ 2.55
LEMD2-202ENST00000421671 UACAQ9BZF9 1416 aa30.94■■■□□ 2.54
LEMD2-202ENST00000421671 NUP153P49790 1475 aaKnown RBP30.92■■■□□ 2.54
LEMD2-202ENST00000421671 RAPGEF6Q8TEU7 1601 aa30.92■■■□□ 2.54
LEMD2-202ENST00000421671 TIMELESSQ9UNS1 1208 aa30.91■■■□□ 2.54
LEMD2-202ENST00000421671 MIA2Q96PC5 1412 aa30.89■■■□□ 2.54
LEMD2-202ENST00000421671 NUP160Q12769 1436 aa30.87■■■□□ 2.53
LEMD2-202ENST00000421671 GCC2Q8IWJ2 1684 aa30.86■■■□□ 2.53
LEMD2-202ENST00000421671 JPH4Q96JJ6 628 aa30.83■■■□□ 2.53
LEMD2-202ENST00000421671 BCL11AQ9H165 835 aa30.81■■■□□ 2.52
LEMD2-202ENST00000421671 PPP1R15AO75807 674 aaPredicted RBP30.8■■■□□ 2.52
LEMD2-202ENST00000421671 RRP7BPQ9NSQ0 103 aa30.8■■■□□ 2.52
LEMD2-202ENST00000421671 CHIC2Q9UKJ5 165 aa30.8■■■□□ 2.52
LEMD2-202ENST00000421671 AKNAQ7Z591 1439 aa30.79■■■□□ 2.52
LEMD2-202ENST00000421671 KDM6BO15054 1643 aa30.77■■■□□ 2.52
LEMD2-202ENST00000421671 PLB1Q6P1J6 1458 aa30.74■■■□□ 2.51
LEMD2-202ENST00000421671 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.5
LEMD2-202ENST00000421671 CHD1O14646 1710 aa30.69■■■□□ 2.5
LEMD2-202ENST00000421671 TONSLQ96HA7 1378 aa30.68■■■□□ 2.5
LEMD2-202ENST00000421671 PRG4Q92954 1404 aaPredicted RBP30.67■■■□□ 2.5
LEMD2-202ENST00000421671 DNMT1P26358 1616 aaKnown RBP30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms