RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CTTNBP2Q8WZ74 1663 aa28.72■■■□□ 2.19
LINC00271-201ENST00000421378 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
LINC00271-201ENST00000421378 IQGAP2Q13576 1575 aa28.67■■■□□ 2.18
LINC00271-201ENST00000421378 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
LINC00271-201ENST00000421378 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
LINC00271-201ENST00000421378 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
LINC00271-201ENST00000421378 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
LINC00271-201ENST00000421378 UGGT2Q9NYU1 1516 aa28.51■■■□□ 2.15
LINC00271-201ENST00000421378 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
LINC00271-201ENST00000421378 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
LINC00271-201ENST00000421378 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
LINC00271-201ENST00000421378 TNIKQ9UKE5 1360 aa28.46■■■□□ 2.15
LINC00271-201ENST00000421378 ERCC6L2Q5T890 1561 aa28.43■■■□□ 2.14
LINC00271-201ENST00000421378 RIMBP3CA6NJZ7 1639 aa28.42■■■□□ 2.14
LINC00271-201ENST00000421378 RIMBP3BA6NNM3 1639 aa28.42■■■□□ 2.14
LINC00271-201ENST00000421378 RIMBP3Q9UFD9 1639 aa28.42■■■□□ 2.14
LINC00271-201ENST00000421378 CARMIL2Q6F5E8 1435 aa28.41■■■□□ 2.14
LINC00271-201ENST00000421378 DISP1Q96F81 1524 aa28.41■■■□□ 2.14
LINC00271-201ENST00000421378 RANGAP1P46060 587 aaPredicted RBP28.4■■■□□ 2.14
LINC00271-201ENST00000421378 KIAA0556O60303 1618 aa28.39■■■□□ 2.13
LINC00271-201ENST00000421378 SAMD9Q5K651 1589 aa28.36■■■□□ 2.13
LINC00271-201ENST00000421378 EFCAB5A4FU69 1503 aa28.34■■■□□ 2.13
LINC00271-201ENST00000421378 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
LINC00271-201ENST00000421378 CLIP1P30622 1438 aa28.26■■■□□ 2.11
LINC00271-201ENST00000421378 CEP162Q5TB80 1403 aa28.26■■■□□ 2.11
LINC00271-201ENST00000421378 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
LINC00271-201ENST00000421378 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
LINC00271-201ENST00000421378 FHOD3Q2V2M9 1422 aa28.21■■■□□ 2.11
LINC00271-201ENST00000421378 PTPRGP23470 1445 aa28.2■■■□□ 2.11
LINC00271-201ENST00000421378 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
LINC00271-201ENST00000421378 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
LINC00271-201ENST00000421378 FMN1Q68DA7 1419 aa28.07■■■□□ 2.08
LINC00271-201ENST00000421378 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
LINC00271-201ENST00000421378 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
LINC00271-201ENST00000421378 ABCA8O94911 1581 aa28.02■■■□□ 2.08
LINC00271-201ENST00000421378 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
LINC00271-201ENST00000421378 ABCC2Q92887 1545 aa28.01■■■□□ 2.07
LINC00271-201ENST00000421378 RAPGEF6Q8TEU7 1601 aa27.99■■■□□ 2.07
LINC00271-201ENST00000421378 UHRF1BP1LA0JNW5 1464 aa27.98■■■□□ 2.07
LINC00271-201ENST00000421378 PCF11O94913 1555 aaKnown RBP27.92■■■□□ 2.06
LINC00271-201ENST00000421378 HECW1Q76N89 1606 aa27.89■■■□□ 2.06
LINC00271-201ENST00000421378 VPS8Q8N3P4 1428 aa27.89■■■□□ 2.05
LINC00271-201ENST00000421378 CASKIN1Q8WXD9 1431 aa27.89■■■□□ 2.05
LINC00271-201ENST00000421378 NUP153P49790 1475 aaKnown RBP27.89■■■□□ 2.05
LINC00271-201ENST00000421378 FYCO1Q9BQS8 1478 aa27.86■■■□□ 2.05
LINC00271-201ENST00000421378 KDM5BQ9UGL1 1544 aa27.86■■■□□ 2.05
LINC00271-201ENST00000421378 NPM1P06748 294 aaKnown RBP eCLIP27.83■■■□□ 2.05
LINC00271-201ENST00000421378 ATP1B4Q9UN42 357 aaPredicted RBP27.83■■■□□ 2.05
LINC00271-201ENST00000421378 ZCCHC11Q5TAX3 1644 aaKnown RBP27.82■■■□□ 2.04
LINC00271-201ENST00000421378 ARID3CA6NKF2 412 aa27.81■■■□□ 2.04
LINC00271-201ENST00000421378 ATP10BO94823 1461 aa27.78■■■□□ 2.04
LINC00271-201ENST00000421378 EPRSP07814 1512 aaKnown RBP27.78■■■□□ 2.04
LINC00271-201ENST00000421378 LRRIQ1Q96JM4 1722 aa27.75■■■□□ 2.03
LINC00271-201ENST00000421378 CCDC18Q5T9S5 1454 aa27.75■■■□□ 2.03
LINC00271-201ENST00000421378 CDK13Q14004 1512 aaKnown RBP27.74■■■□□ 2.03
LINC00271-201ENST00000421378 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
LINC00271-201ENST00000421378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.73■■■□□ 2.03
LINC00271-201ENST00000421378 HNRNPUL2Q1KMD3 747 aaKnown RBP27.73■■■□□ 2.03
LINC00271-201ENST00000421378 ASXL2Q76L83 1435 aa27.68■■■□□ 2.02
LINC00271-201ENST00000421378 WDR7Q9Y4E6 1490 aa27.63■■■□□ 2.01
LINC00271-201ENST00000421378 CFAP43Q8NDM7 1665 aa27.61■■■□□ 2.01
LINC00271-201ENST00000421378 CDK11AQ9UQ88 783 aaPredicted RBP27.6■■■□□ 2.01
LINC00271-201ENST00000421378 TIAM1Q13009 1591 aa27.59■■■□□ 2.01
LINC00271-201ENST00000421378 PLEKHD1A6NEE1 506 aa27.59■■■□□ 2.01
LINC00271-201ENST00000421378 MAP3K1Q13233 1512 aa27.57■■■□□ 2
LINC00271-201ENST00000421378 APLP2Q06481 763 aa27.56■■■□□ 2
LINC00271-201ENST00000421378 MAGI3Q5TCQ9 1506 aa27.53■■■□□ 2
LINC00271-201ENST00000421378 TROQ12816 1431 aaPredicted RBP27.52■■■□□ 2
LINC00271-201ENST00000421378 ABCC10Q5T3U5 1492 aa27.52■■■□□ 2
LINC00271-201ENST00000421378 DIP2BQ9P265 1576 aa27.52■■■□□ 2
LINC00271-201ENST00000421378 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
LINC00271-201ENST00000421378 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
LINC00271-201ENST00000421378 EHBP1L1Q8N3D4 1523 aa27.48■■□□□ 1.99
LINC00271-201ENST00000421378 LRRC9Q6ZRR7 1453 aa27.46■■□□□ 1.99
LINC00271-201ENST00000421378 KIF14Q15058 1648 aa27.46■■□□□ 1.99
LINC00271-201ENST00000421378 KIF13AQ9H1H9 1805 aa27.45■■□□□ 1.98
LINC00271-201ENST00000421378 GLI2P10070 1586 aa27.44■■□□□ 1.98
LINC00271-201ENST00000421378 FAM69CQ0P6D2 419 aa27.43■■□□□ 1.98
LINC00271-201ENST00000421378 TRHP20396 242 aaPredicted RBP27.43■■□□□ 1.98
LINC00271-201ENST00000421378 KANK4Q5T7N3 995 aaPredicted RBP27.4■■□□□ 1.98
LINC00271-201ENST00000421378 ABCA9Q8IUA7 1624 aa27.39■■□□□ 1.98
LINC00271-201ENST00000421378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.39■■□□□ 1.98
LINC00271-201ENST00000421378 TTC37Q6PGP7 1564 aa27.37■■□□□ 1.97
LINC00271-201ENST00000421378 MAP3K4Q9Y6R4 1608 aa27.36■■□□□ 1.97
LINC00271-201ENST00000421378 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
LINC00271-201ENST00000421378 CD109Q6YHK3 1445 aa27.31■■□□□ 1.96
LINC00271-201ENST00000421378 NCOA2Q15596 1464 aa27.3■■□□□ 1.96
LINC00271-201ENST00000421378 MYO5CQ9NQX4 1742 aa27.27■■□□□ 1.96
LINC00271-201ENST00000421378 TSPOAP1O95153 1857 aa27.26■■□□□ 1.95
LINC00271-201ENST00000421378 CCNB3Q8WWL7 1395 aa27.23■■□□□ 1.95
LINC00271-201ENST00000421378 CDC42BPAQ5VT25 1732 aa27.22■■□□□ 1.95
LINC00271-201ENST00000421378 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
LINC00271-201ENST00000421378 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
LINC00271-201ENST00000421378 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
LINC00271-201ENST00000421378 PLCH2O75038 1416 aa27.21■■□□□ 1.95
LINC00271-201ENST00000421378 GPATCH8Q9UKJ3 1502 aaKnown RBP27.2■■□□□ 1.95
LINC00271-201ENST00000421378 ARAP3Q8WWN8 1544 aa27.19■■□□□ 1.94
LINC00271-201ENST00000421378 ITSN2Q9NZM3 1697 aa27.19■■□□□ 1.94
LINC00271-201ENST00000421378 TEX14Q8IWB6 1497 aa27.19■■□□□ 1.94
LINC00271-201ENST00000421378 ARHGAP5Q13017 1502 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms