RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
SEMA4D-207ENST00000420987 BCANQ96GW7 911 aa13.59□□□□□ -0.23
SEMA4D-207ENST00000420987 PRDM2Q13029 1718 aa13.58□□□□□ -0.23
SEMA4D-207ENST00000420987 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-207ENST00000420987 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
SEMA4D-207ENST00000420987 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
SEMA4D-207ENST00000420987 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
SEMA4D-207ENST00000420987 KIF21BO75037 1637 aa13.53□□□□□ -0.24
SEMA4D-207ENST00000420987 ITGAEP38570 1179 aa13.52□□□□□ -0.25
SEMA4D-207ENST00000420987 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4D-207ENST00000420987 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
SEMA4D-207ENST00000420987 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
SEMA4D-207ENST00000420987 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
SEMA4D-207ENST00000420987 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
SEMA4D-207ENST00000420987 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
SEMA4D-207ENST00000420987 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-207ENST00000420987 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
SEMA4D-207ENST00000420987 CDK11AQ9UQ88 783 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-207ENST00000420987 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
SEMA4D-207ENST00000420987 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-207ENST00000420987 WDR62O43379 1518 aa13.38□□□□□ -0.27
SEMA4D-207ENST00000420987 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
SEMA4D-207ENST00000420987 CUL7Q14999 1698 aa13.36□□□□□ -0.27
SEMA4D-207ENST00000420987 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-207ENST00000420987 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
SEMA4D-207ENST00000420987 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
SEMA4D-207ENST00000420987 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
SEMA4D-207ENST00000420987 ANP32EQ9BTT0 268 aa13.34□□□□□ -0.27
SEMA4D-207ENST00000420987 CARMIL2Q6F5E8 1435 aa13.33□□□□□ -0.27
SEMA4D-207ENST00000420987 MIER1Q8N108 512 aa13.33□□□□□ -0.28
SEMA4D-207ENST00000420987 FHOD3Q2V2M9 1422 aa13.32□□□□□ -0.28
SEMA4D-207ENST00000420987 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
SEMA4D-207ENST00000420987 MAGI1Q96QZ7 1491 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-207ENST00000420987 GLIPR1L2Q4G1C9 344 aa13.28□□□□□ -0.28
SEMA4D-207ENST00000420987 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
SEMA4D-207ENST00000420987 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
SEMA4D-207ENST00000420987 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
SEMA4D-207ENST00000420987 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-207ENST00000420987 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
SEMA4D-207ENST00000420987 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
SEMA4D-207ENST00000420987 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
SEMA4D-207ENST00000420987 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-207ENST00000420987 GRIN2AQ12879 1464 aa13.22□□□□□ -0.29
SEMA4D-207ENST00000420987 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEMA4D-207ENST00000420987 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
SEMA4D-207ENST00000420987 NBR1Q14596 966 aa13.21□□□□□ -0.29
SEMA4D-207ENST00000420987 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
SEMA4D-207ENST00000420987 THOC2Q8NI27 1593 aaKnown RBP13.21□□□□□ -0.3
SEMA4D-207ENST00000420987 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-207ENST00000420987 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-207ENST00000420987 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-207ENST00000420987 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
SEMA4D-207ENST00000420987 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
SEMA4D-207ENST00000420987 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-207ENST00000420987 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
SEMA4D-207ENST00000420987 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
SEMA4D-207ENST00000420987 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
SEMA4D-207ENST00000420987 PTPRGP23470 1445 aa13.15□□□□□ -0.3
SEMA4D-207ENST00000420987 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
SEMA4D-207ENST00000420987 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-207ENST00000420987 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
SEMA4D-207ENST00000420987 FYCO1Q9BQS8 1478 aa13.12□□□□□ -0.31
SEMA4D-207ENST00000420987 PRG4Q92954 1404 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-207ENST00000420987 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
SEMA4D-207ENST00000420987 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
SEMA4D-207ENST00000420987 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.31
SEMA4D-207ENST00000420987 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
SEMA4D-207ENST00000420987 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
SEMA4D-207ENST00000420987 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
SEMA4D-207ENST00000420987 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
SEMA4D-207ENST00000420987 FKBP8Q14318 412 aa13.05□□□□□ -0.32
SEMA4D-207ENST00000420987 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
SEMA4D-207ENST00000420987 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
SEMA4D-207ENST00000420987 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
SEMA4D-207ENST00000420987 NUP160Q12769 1436 aa13.03□□□□□ -0.32
SEMA4D-207ENST00000420987 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.32
SEMA4D-207ENST00000420987 UGGT2Q9NYU1 1516 aa13.02□□□□□ -0.32
SEMA4D-207ENST00000420987 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
SEMA4D-207ENST00000420987 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-207ENST00000420987 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
SEMA4D-207ENST00000420987 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
SEMA4D-207ENST00000420987 MAP3K1Q13233 1512 aa13□□□□□ -0.33
SEMA4D-207ENST00000420987 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-207ENST00000420987 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-207ENST00000420987 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-207ENST00000420987 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
SEMA4D-207ENST00000420987 ANP32AP39687 249 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-207ENST00000420987 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-207ENST00000420987 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
SEMA4D-207ENST00000420987 SUPT16HQ9Y5B9 1047 aaKnown RBP12.96□□□□□ -0.34
SEMA4D-207ENST00000420987 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
SEMA4D-207ENST00000420987 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
SEMA4D-207ENST00000420987 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
SEMA4D-207ENST00000420987 NCOA2Q15596 1464 aa12.94□□□□□ -0.34
SEMA4D-207ENST00000420987 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
SEMA4D-207ENST00000420987 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
SEMA4D-207ENST00000420987 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
SEMA4D-207ENST00000420987 MYOM3Q5VTT5 1437 aa12.93□□□□□ -0.34
SEMA4D-207ENST00000420987 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
SEMA4D-207ENST00000420987 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms