RNA–Protein interactions for RNA: ENST00000420798.6

TRO-208, Transcript of trophinin, humanhuman

TSL 2 BASIC

Gene TRO, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-208ENST00000420798 FBLN2P98095 1184 aa14.3□□□□□ -0.12
TRO-208ENST00000420798 NESP48681 1621 aa14.3□□□□□ -0.12
TRO-208ENST00000420798 FOXD1Q16676 465 aa14.29□□□□□ -0.12
TRO-208ENST00000420798 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
TRO-208ENST00000420798 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
TRO-208ENST00000420798 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
TRO-208ENST00000420798 PHLDB1Q86UU1 1377 aa14.25□□□□□ -0.13
TRO-208ENST00000420798 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
TRO-208ENST00000420798 IRX6P78412 446 aaPredicted RBP14.24□□□□□ -0.13
TRO-208ENST00000420798 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
TRO-208ENST00000420798 FGD5Q6ZNL6 1462 aa14.23□□□□□ -0.13
TRO-208ENST00000420798 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
TRO-208ENST00000420798 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
TRO-208ENST00000420798 FKBP8Q14318 412 aa14.2□□□□□ -0.14
TRO-208ENST00000420798 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
TRO-208ENST00000420798 CFTRP13569 1480 aa14.19□□□□□ -0.14
TRO-208ENST00000420798 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
TRO-208ENST00000420798 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
TRO-208ENST00000420798 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
TRO-208ENST00000420798 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
TRO-208ENST00000420798 TONSLQ96HA7 1378 aa14.11□□□□□ -0.15
TRO-208ENST00000420798 ANP32CO43423 234 aa14.1□□□□□ -0.15
TRO-208ENST00000420798 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
TRO-208ENST00000420798 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRO-208ENST00000420798 FAM9BQ8IZU0 186 aa14.05□□□□□ -0.16
TRO-208ENST00000420798 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
TRO-208ENST00000420798 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
TRO-208ENST00000420798 ZNF644Q9H582 1327 aaPredicted RBP14.04□□□□□ -0.16
TRO-208ENST00000420798 ERICH3Q5RHP9 1530 aa14.04□□□□□ -0.16
TRO-208ENST00000420798 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
TRO-208ENST00000420798 NEFLP07196 543 aa14.03□□□□□ -0.16
TRO-208ENST00000420798 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.17
TRO-208ENST00000420798 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
TRO-208ENST00000420798 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
TRO-208ENST00000420798 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
TRO-208ENST00000420798 HMGXB3Q12766 1538 aa14□□□□□ -0.17
TRO-208ENST00000420798 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRO-208ENST00000420798 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
TRO-208ENST00000420798 SALL2Q9Y467 1007 aaPredicted RBP13.98□□□□□ -0.17
TRO-208ENST00000420798 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
TRO-208ENST00000420798 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
TRO-208ENST00000420798 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.17
TRO-208ENST00000420798 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.18
TRO-208ENST00000420798 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
TRO-208ENST00000420798 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
TRO-208ENST00000420798 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
TRO-208ENST00000420798 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
TRO-208ENST00000420798 MAPKBP1O60336 1514 aa13.94□□□□□ -0.18
TRO-208ENST00000420798 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
TRO-208ENST00000420798 TSHZ2Q9NRE2 1034 aa13.93□□□□□ -0.18
TRO-208ENST00000420798 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
TRO-208ENST00000420798 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
TRO-208ENST00000420798 MPHOSPH9Q99550 1183 aa13.89□□□□□ -0.19
TRO-208ENST00000420798 FGD6Q6ZV73 1430 aa13.88□□□□□ -0.19
TRO-208ENST00000420798 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
TRO-208ENST00000420798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.193e-7■■■■□ 21.1
TRO-208ENST00000420798 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
TRO-208ENST00000420798 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
TRO-208ENST00000420798 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
TRO-208ENST00000420798 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
TRO-208ENST00000420798 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
TRO-208ENST00000420798 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
TRO-208ENST00000420798 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRO-208ENST00000420798 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
TRO-208ENST00000420798 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
TRO-208ENST00000420798 NCOA2Q15596 1464 aa13.83□□□□□ -0.2
TRO-208ENST00000420798 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
TRO-208ENST00000420798 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
TRO-208ENST00000420798 CASKIN1Q8WXD9 1431 aa13.82□□□□□ -0.2
TRO-208ENST00000420798 CDK13Q14004 1512 aaKnown RBP13.81□□□□□ -0.2
TRO-208ENST00000420798 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
TRO-208ENST00000420798 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
TRO-208ENST00000420798 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.2
TRO-208ENST00000420798 PKD2Q13563 968 aa13.76□□□□□ -0.21
TRO-208ENST00000420798 NAIPQ13075 1403 aa13.76□□□□□ -0.21
TRO-208ENST00000420798 HNRNPMP52272 730 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRO-208ENST00000420798 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
TRO-208ENST00000420798 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
TRO-208ENST00000420798 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
TRO-208ENST00000420798 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
TRO-208ENST00000420798 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
TRO-208ENST00000420798 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
TRO-208ENST00000420798 UACAQ9BZF9 1416 aa13.71□□□□□ -0.22
TRO-208ENST00000420798 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
TRO-208ENST00000420798 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
TRO-208ENST00000420798 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
TRO-208ENST00000420798 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
TRO-208ENST00000420798 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
TRO-208ENST00000420798 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
TRO-208ENST00000420798 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
TRO-208ENST00000420798 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
TRO-208ENST00000420798 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
TRO-208ENST00000420798 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
TRO-208ENST00000420798 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
TRO-208ENST00000420798 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
TRO-208ENST00000420798 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
TRO-208ENST00000420798 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
TRO-208ENST00000420798 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
TRO-208ENST00000420798 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
TRO-208ENST00000420798 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms