RNA–Protein interactions for RNA: ENST00000419841.2

C7orf43-204, Transcript of chromosome 7 open reading frame 43, humanhuman

TSL 2

Gene C7orf43, Length 1,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C7orf43-204ENST00000419841 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
C7orf43-204ENST00000419841 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
C7orf43-204ENST00000419841 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
C7orf43-204ENST00000419841 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
C7orf43-204ENST00000419841 FBLN2P98095 1184 aa24.36■■□□□ 1.49
C7orf43-204ENST00000419841 ARAP1Q96P48 1450 aa24.34■■□□□ 1.49
C7orf43-204ENST00000419841 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.49
C7orf43-204ENST00000419841 EFCAB5A4FU69 1503 aa24.33■■□□□ 1.48
C7orf43-204ENST00000419841 KIAA0586Q9BVV6 1533 aa24.32■■□□□ 1.48
C7orf43-204ENST00000419841 IQGAP2Q13576 1575 aa24.32■■□□□ 1.48
C7orf43-204ENST00000419841 NUP160Q12769 1436 aa24.29■■□□□ 1.48
C7orf43-204ENST00000419841 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
C7orf43-204ENST00000419841 PPARGC1BQ86YN6 1023 aaKnown RBP24.25■■□□□ 1.47
C7orf43-204ENST00000419841 SAMD9Q5K651 1589 aa24.24■■□□□ 1.47
C7orf43-204ENST00000419841 CHD1O14646 1710 aa24.22■■□□□ 1.47
C7orf43-204ENST00000419841 UGGT2Q9NYU1 1516 aa24.21■■□□□ 1.47
C7orf43-204ENST00000419841 P3H3Q8IVL6 736 aa24.2■■□□□ 1.47
C7orf43-204ENST00000419841 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
C7orf43-204ENST00000419841 APLP2Q06481 763 aa24.12■■□□□ 1.45
C7orf43-204ENST00000419841 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
C7orf43-204ENST00000419841 JPH4Q96JJ6 628 aa24.1■■□□□ 1.45
C7orf43-204ENST00000419841 DISP1Q96F81 1524 aa24.08■■□□□ 1.45
C7orf43-204ENST00000419841 KIAA0556O60303 1618 aa24.07■■□□□ 1.44
C7orf43-204ENST00000419841 CARMIL2Q6F5E8 1435 aa24.03■■□□□ 1.44
C7orf43-204ENST00000419841 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
C7orf43-204ENST00000419841 TTBK1Q5TCY1 1321 aaPredicted RBP24.02■■□□□ 1.44
C7orf43-204ENST00000419841 PCF11O94913 1555 aaKnown RBP24.02■■□□□ 1.44
C7orf43-204ENST00000419841 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
C7orf43-204ENST00000419841 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
C7orf43-204ENST00000419841 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
C7orf43-204ENST00000419841 SHROOM2Q13796 1616 aa23.96■■□□□ 1.43
C7orf43-204ENST00000419841 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
C7orf43-204ENST00000419841 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
C7orf43-204ENST00000419841 TIAM1Q13009 1591 aa23.91■■□□□ 1.42
C7orf43-204ENST00000419841 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
C7orf43-204ENST00000419841 KANK4Q5T7N3 995 aaPredicted RBP23.87■■□□□ 1.41
C7orf43-204ENST00000419841 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
C7orf43-204ENST00000419841 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
C7orf43-204ENST00000419841 HRCP23327 699 aa23.82■■□□□ 1.4
C7orf43-204ENST00000419841 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
C7orf43-204ENST00000419841 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
C7orf43-204ENST00000419841 RAPGEF6Q8TEU7 1601 aa23.81■■□□□ 1.4
C7orf43-204ENST00000419841 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
C7orf43-204ENST00000419841 PTPRGP23470 1445 aa23.8■■□□□ 1.4
C7orf43-204ENST00000419841 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
C7orf43-204ENST00000419841 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
C7orf43-204ENST00000419841 PLB1Q6P1J6 1458 aa23.76■■□□□ 1.39
C7orf43-204ENST00000419841 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
C7orf43-204ENST00000419841 ABCA8O94911 1581 aa23.74■■□□□ 1.39
C7orf43-204ENST00000419841 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
C7orf43-204ENST00000419841 CDK13Q14004 1512 aaKnown RBP23.69■■□□□ 1.38
C7orf43-204ENST00000419841 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
C7orf43-204ENST00000419841 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
C7orf43-204ENST00000419841 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
C7orf43-204ENST00000419841 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
C7orf43-204ENST00000419841 CDK11AQ9UQ88 783 aaPredicted RBP23.63■■□□□ 1.37
C7orf43-204ENST00000419841 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
C7orf43-204ENST00000419841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
C7orf43-204ENST00000419841 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
C7orf43-204ENST00000419841 ATP10BO94823 1461 aa23.58■■□□□ 1.37
C7orf43-204ENST00000419841 SUPT6HQ7KZ85 1726 aaKnown RBP23.58■■□□□ 1.37
C7orf43-204ENST00000419841 ABCC2Q92887 1545 aa23.58■■□□□ 1.36
C7orf43-204ENST00000419841 PHLDB1Q86UU1 1377 aa23.57■■□□□ 1.36
C7orf43-204ENST00000419841 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
C7orf43-204ENST00000419841 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
C7orf43-204ENST00000419841 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
C7orf43-204ENST00000419841 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
C7orf43-204ENST00000419841 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
C7orf43-204ENST00000419841 PLEKHD1A6NEE1 506 aa23.5■■□□□ 1.35
C7orf43-204ENST00000419841 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
C7orf43-204ENST00000419841 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
C7orf43-204ENST00000419841 KDM5BQ9UGL1 1544 aa23.44■■□□□ 1.34
C7orf43-204ENST00000419841 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
C7orf43-204ENST00000419841 FGD6Q6ZV73 1430 aa23.43■■□□□ 1.34
C7orf43-204ENST00000419841 CCER1Q8TC90 406 aaPredicted RBP23.41■■□□□ 1.34
C7orf43-204ENST00000419841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
C7orf43-204ENST00000419841 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
C7orf43-204ENST00000419841 KIF14Q15058 1648 aa23.37■■□□□ 1.33
C7orf43-204ENST00000419841 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
C7orf43-204ENST00000419841 MIA2Q96PC5 1412 aa23.36■■□□□ 1.33
C7orf43-204ENST00000419841 ABCC10Q5T3U5 1492 aa23.32■■□□□ 1.32
C7orf43-204ENST00000419841 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
C7orf43-204ENST00000419841 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
C7orf43-204ENST00000419841 PTPN23Q9H3S7 1636 aa23.31■■□□□ 1.32
C7orf43-204ENST00000419841 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
C7orf43-204ENST00000419841 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
C7orf43-204ENST00000419841 ITSN2Q9NZM3 1697 aa23.29■■□□□ 1.32
C7orf43-204ENST00000419841 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
C7orf43-204ENST00000419841 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
C7orf43-204ENST00000419841 ITGAEP38570 1179 aa23.28■■□□□ 1.32
C7orf43-204ENST00000419841 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
C7orf43-204ENST00000419841 WDR7Q9Y4E6 1490 aa23.23■■□□□ 1.31
C7orf43-204ENST00000419841 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
C7orf43-204ENST00000419841 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
C7orf43-204ENST00000419841 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
C7orf43-204ENST00000419841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.21■■□□□ 1.31
C7orf43-204ENST00000419841 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
C7orf43-204ENST00000419841 TTC37Q6PGP7 1564 aa23.17■■□□□ 1.3
C7orf43-204ENST00000419841 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
C7orf43-204ENST00000419841 CAMSAP2Q08AD1 1489 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms