RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
COL12A1-204ENST00000419671 GAPVD1Q14C86 1478 aa12.69□□□□□ -0.38
COL12A1-204ENST00000419671 MYT1Q01538 1121 aa12.68□□□□□ -0.38
COL12A1-204ENST00000419671 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
COL12A1-204ENST00000419671 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
COL12A1-204ENST00000419671 ARHGAP35Q9NRY4 1499 aa12.66□□□□□ -0.38
COL12A1-204ENST00000419671 HRCP23327 699 aa12.64□□□□□ -0.39
COL12A1-204ENST00000419671 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
COL12A1-204ENST00000419671 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-204ENST00000419671 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
COL12A1-204ENST00000419671 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL12A1-204ENST00000419671 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-204ENST00000419671 ADAMTS12P58397 1594 aa12.58□□□□□ -0.4
COL12A1-204ENST00000419671 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
COL12A1-204ENST00000419671 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
COL12A1-204ENST00000419671 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
COL12A1-204ENST00000419671 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
COL12A1-204ENST00000419671 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-204ENST00000419671 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
COL12A1-204ENST00000419671 SAMD9Q5K651 1589 aa12.52□□□□□ -0.41
COL12A1-204ENST00000419671 APLP2Q06481 763 aa12.52□□□□□ -0.41
COL12A1-204ENST00000419671 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
COL12A1-204ENST00000419671 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
COL12A1-204ENST00000419671 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
COL12A1-204ENST00000419671 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
COL12A1-204ENST00000419671 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
COL12A1-204ENST00000419671 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
COL12A1-204ENST00000419671 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
COL12A1-204ENST00000419671 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-204ENST00000419671 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
COL12A1-204ENST00000419671 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
COL12A1-204ENST00000419671 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
COL12A1-204ENST00000419671 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-204ENST00000419671 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
COL12A1-204ENST00000419671 ZBTB22O15209 634 aa12.43□□□□□ -0.42
COL12A1-204ENST00000419671 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
COL12A1-204ENST00000419671 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
COL12A1-204ENST00000419671 FMN1Q68DA7 1419 aa12.4□□□□□ -0.42
COL12A1-204ENST00000419671 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
COL12A1-204ENST00000419671 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
COL12A1-204ENST00000419671 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
COL12A1-204ENST00000419671 CEP170Q5SW79 1584 aa12.38□□□□□ -0.43
COL12A1-204ENST00000419671 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
COL12A1-204ENST00000419671 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
COL12A1-204ENST00000419671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
COL12A1-204ENST00000419671 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
COL12A1-204ENST00000419671 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
COL12A1-204ENST00000419671 DISP1Q96F81 1524 aa12.33□□□□□ -0.44
COL12A1-204ENST00000419671 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
COL12A1-204ENST00000419671 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
COL12A1-204ENST00000419671 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-204ENST00000419671 NUP160Q12769 1436 aa12.31□□□□□ -0.44
COL12A1-204ENST00000419671 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-204ENST00000419671 CHD1O14646 1710 aa12.31□□□□□ -0.44
COL12A1-204ENST00000419671 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
COL12A1-204ENST00000419671 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
COL12A1-204ENST00000419671 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-204ENST00000419671 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
COL12A1-204ENST00000419671 FBLN2P98095 1184 aa12.27□□□□□ -0.44
COL12A1-204ENST00000419671 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.45
COL12A1-204ENST00000419671 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.45
COL12A1-204ENST00000419671 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
COL12A1-204ENST00000419671 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
COL12A1-204ENST00000419671 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
COL12A1-204ENST00000419671 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
COL12A1-204ENST00000419671 MTUS2Q5JR59 1369 aa12.23□□□□□ -0.45
COL12A1-204ENST00000419671 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
COL12A1-204ENST00000419671 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
COL12A1-204ENST00000419671 JPH4Q96JJ6 628 aa12.21□□□□□ -0.46
COL12A1-204ENST00000419671 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.46
COL12A1-204ENST00000419671 NCOA2Q15596 1464 aa12.21□□□□□ -0.46
COL12A1-204ENST00000419671 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
COL12A1-204ENST00000419671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL12A1-204ENST00000419671 CARMIL2Q6F5E8 1435 aa12.18□□□□□ -0.46
COL12A1-204ENST00000419671 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
COL12A1-204ENST00000419671 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
COL12A1-204ENST00000419671 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
COL12A1-204ENST00000419671 ITGAEP38570 1179 aa12.16□□□□□ -0.46
COL12A1-204ENST00000419671 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
COL12A1-204ENST00000419671 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
COL12A1-204ENST00000419671 ABCA8O94911 1581 aa12.15□□□□□ -0.46
COL12A1-204ENST00000419671 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
COL12A1-204ENST00000419671 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
COL12A1-204ENST00000419671 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
COL12A1-204ENST00000419671 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-204ENST00000419671 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
COL12A1-204ENST00000419671 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
COL12A1-204ENST00000419671 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
COL12A1-204ENST00000419671 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
COL12A1-204ENST00000419671 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
COL12A1-204ENST00000419671 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
COL12A1-204ENST00000419671 PTPRKQ15262 1439 aa12.08□□□□□ -0.48
COL12A1-204ENST00000419671 KIF14Q15058 1648 aa12.08□□□□□ -0.48
COL12A1-204ENST00000419671 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
COL12A1-204ENST00000419671 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
COL12A1-204ENST00000419671 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
COL12A1-204ENST00000419671 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
COL12A1-204ENST00000419671 ATP10BO94823 1461 aa12.06□□□□□ -0.48
COL12A1-204ENST00000419671 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
COL12A1-204ENST00000419671 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms