RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
LINC00642-201ENST00000419459 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
LINC00642-201ENST00000419459 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
LINC00642-201ENST00000419459 NUP160Q12769 1436 aa20.39■□□□□ 0.86
LINC00642-201ENST00000419459 CEP162Q5TB80 1403 aa20.39■□□□□ 0.86
LINC00642-201ENST00000419459 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
LINC00642-201ENST00000419459 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
LINC00642-201ENST00000419459 CLIP1P30622 1438 aa20.31■□□□□ 0.84
LINC00642-201ENST00000419459 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
LINC00642-201ENST00000419459 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
LINC00642-201ENST00000419459 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
LINC00642-201ENST00000419459 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
LINC00642-201ENST00000419459 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
LINC00642-201ENST00000419459 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
LINC00642-201ENST00000419459 UGGT2Q9NYU1 1516 aa20.21■□□□□ 0.83
LINC00642-201ENST00000419459 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
LINC00642-201ENST00000419459 SAMD9Q5K651 1589 aa20.2■□□□□ 0.82
LINC00642-201ENST00000419459 FHOD3Q2V2M9 1422 aa20.2■□□□□ 0.82
LINC00642-201ENST00000419459 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
LINC00642-201ENST00000419459 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
LINC00642-201ENST00000419459 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
LINC00642-201ENST00000419459 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
LINC00642-201ENST00000419459 EFCAB5A4FU69 1503 aa20.17■□□□□ 0.82
LINC00642-201ENST00000419459 KIAA0556O60303 1618 aa20.17■□□□□ 0.82
LINC00642-201ENST00000419459 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
LINC00642-201ENST00000419459 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
LINC00642-201ENST00000419459 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
LINC00642-201ENST00000419459 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
LINC00642-201ENST00000419459 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
LINC00642-201ENST00000419459 PCF11O94913 1555 aaKnown RBP20.02■□□□□ 0.8
LINC00642-201ENST00000419459 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
LINC00642-201ENST00000419459 FMN1Q68DA7 1419 aa19.99■□□□□ 0.79
LINC00642-201ENST00000419459 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
LINC00642-201ENST00000419459 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
LINC00642-201ENST00000419459 ARID3CA6NKF2 412 aa19.97■□□□□ 0.79
LINC00642-201ENST00000419459 PTPRGP23470 1445 aa19.97■□□□□ 0.79
LINC00642-201ENST00000419459 LRRIQ1Q96JM4 1722 aa19.94■□□□□ 0.78
LINC00642-201ENST00000419459 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
LINC00642-201ENST00000419459 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
LINC00642-201ENST00000419459 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
LINC00642-201ENST00000419459 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
LINC00642-201ENST00000419459 RAPGEF6Q8TEU7 1601 aa19.92■□□□□ 0.78
LINC00642-201ENST00000419459 CASKIN1Q8WXD9 1431 aa19.91■□□□□ 0.78
LINC00642-201ENST00000419459 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
LINC00642-201ENST00000419459 ABCA8O94911 1581 aa19.87■□□□□ 0.77
LINC00642-201ENST00000419459 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
LINC00642-201ENST00000419459 ZEB1P37275 1124 aaPredicted RBP19.86■□□□□ 0.77
LINC00642-201ENST00000419459 HECW1Q76N89 1606 aa19.86■□□□□ 0.77
LINC00642-201ENST00000419459 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
LINC00642-201ENST00000419459 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
LINC00642-201ENST00000419459 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.76
LINC00642-201ENST00000419459 APLP2Q06481 763 aa19.82■□□□□ 0.76
LINC00642-201ENST00000419459 EPRSP07814 1512 aaKnown RBP19.82■□□□□ 0.76
LINC00642-201ENST00000419459 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
LINC00642-201ENST00000419459 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
LINC00642-201ENST00000419459 TIAM1Q13009 1591 aa19.8■□□□□ 0.76
LINC00642-201ENST00000419459 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
LINC00642-201ENST00000419459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
LINC00642-201ENST00000419459 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
LINC00642-201ENST00000419459 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
LINC00642-201ENST00000419459 ATP10BO94823 1461 aa19.75■□□□□ 0.75
LINC00642-201ENST00000419459 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
LINC00642-201ENST00000419459 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
LINC00642-201ENST00000419459 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
LINC00642-201ENST00000419459 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
LINC00642-201ENST00000419459 LRRC9Q6ZRR7 1453 aa19.71■□□□□ 0.75
LINC00642-201ENST00000419459 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
LINC00642-201ENST00000419459 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
LINC00642-201ENST00000419459 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
LINC00642-201ENST00000419459 MTUS2Q5JR59 1369 aa19.68■□□□□ 0.74
LINC00642-201ENST00000419459 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
LINC00642-201ENST00000419459 KIF14Q15058 1648 aa19.61■□□□□ 0.73
LINC00642-201ENST00000419459 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
LINC00642-201ENST00000419459 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
LINC00642-201ENST00000419459 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
LINC00642-201ENST00000419459 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.73
LINC00642-201ENST00000419459 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
LINC00642-201ENST00000419459 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
LINC00642-201ENST00000419459 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
LINC00642-201ENST00000419459 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
LINC00642-201ENST00000419459 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
LINC00642-201ENST00000419459 WDR7Q9Y4E6 1490 aa19.53■□□□□ 0.72
LINC00642-201ENST00000419459 TTC37Q6PGP7 1564 aa19.5■□□□□ 0.71
LINC00642-201ENST00000419459 MAPKBP1O60336 1514 aa19.48■□□□□ 0.71
LINC00642-201ENST00000419459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.71
LINC00642-201ENST00000419459 CDC42BPAQ5VT25 1732 aa19.45■□□□□ 0.7
LINC00642-201ENST00000419459 ABCC10Q5T3U5 1492 aa19.45■□□□□ 0.7
LINC00642-201ENST00000419459 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
LINC00642-201ENST00000419459 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
LINC00642-201ENST00000419459 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
LINC00642-201ENST00000419459 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
LINC00642-201ENST00000419459 CDC42BPBQ9Y5S2 1711 aa19.4■□□□□ 0.7
LINC00642-201ENST00000419459 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
LINC00642-201ENST00000419459 MYO5CQ9NQX4 1742 aa19.39■□□□□ 0.69
LINC00642-201ENST00000419459 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.69
LINC00642-201ENST00000419459 ABCA9Q8IUA7 1624 aa19.39■□□□□ 0.69
LINC00642-201ENST00000419459 PREX2Q70Z35 1606 aa19.37■□□□□ 0.69
LINC00642-201ENST00000419459 DIP2BQ9P265 1576 aa19.37■□□□□ 0.69
LINC00642-201ENST00000419459 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
LINC00642-201ENST00000419459 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms