RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
DDR1-232ENST00000418800 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
DDR1-232ENST00000418800 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.2
DDR1-232ENST00000418800 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.19
DDR1-232ENST00000418800 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
DDR1-232ENST00000418800 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
DDR1-232ENST00000418800 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
DDR1-232ENST00000418800 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
DDR1-232ENST00000418800 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
DDR1-232ENST00000418800 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
DDR1-232ENST00000418800 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
DDR1-232ENST00000418800 EEA1Q15075 1411 aa16.21■□□□□ 0.19
DDR1-232ENST00000418800 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.18
DDR1-232ENST00000418800 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
DDR1-232ENST00000418800 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
DDR1-232ENST00000418800 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
DDR1-232ENST00000418800 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
DDR1-232ENST00000418800 CCNB3Q8WWL7 1395 aa16.1■□□□□ 0.17
DDR1-232ENST00000418800 TONSLQ96HA7 1378 aa16.1■□□□□ 0.17
DDR1-232ENST00000418800 NOP58Q9Y2X3 529 aaKnown RBP16.09■□□□□ 0.17
DDR1-232ENST00000418800 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.17
DDR1-232ENST00000418800 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
DDR1-232ENST00000418800 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
DDR1-232ENST00000418800 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
DDR1-232ENST00000418800 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
DDR1-232ENST00000418800 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
DDR1-232ENST00000418800 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
DDR1-232ENST00000418800 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
DDR1-232ENST00000418800 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
DDR1-232ENST00000418800 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
DDR1-232ENST00000418800 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
DDR1-232ENST00000418800 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
DDR1-232ENST00000418800 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.14
DDR1-232ENST00000418800 FBLN2P98095 1184 aa15.95■□□□□ 0.14
DDR1-232ENST00000418800 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
DDR1-232ENST00000418800 KIF21BO75037 1637 aa15.93■□□□□ 0.14
DDR1-232ENST00000418800 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
DDR1-232ENST00000418800 NEFMP07197 916 aa15.9■□□□□ 0.14
DDR1-232ENST00000418800 FOXD1Q16676 465 aa15.89■□□□□ 0.13
DDR1-232ENST00000418800 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
DDR1-232ENST00000418800 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
DDR1-232ENST00000418800 NESP48681 1621 aa15.87■□□□□ 0.13
DDR1-232ENST00000418800 CFTRP13569 1480 aa15.86■□□□□ 0.13
DDR1-232ENST00000418800 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
DDR1-232ENST00000418800 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
DDR1-232ENST00000418800 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
DDR1-232ENST00000418800 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.138e-8■■■■■ 39.6
DDR1-232ENST00000418800 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
DDR1-232ENST00000418800 ARXQ96QS3 562 aa15.81■□□□□ 0.12
DDR1-232ENST00000418800 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
DDR1-232ENST00000418800 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
DDR1-232ENST00000418800 IPO9Q96P70 1041 aaKnown RBP15.78■□□□□ 0.12
DDR1-232ENST00000418800 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
DDR1-232ENST00000418800 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
DDR1-232ENST00000418800 CUX2O14529 1486 aa15.75■□□□□ 0.11
DDR1-232ENST00000418800 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
DDR1-232ENST00000418800 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
DDR1-232ENST00000418800 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
DDR1-232ENST00000418800 MTUS2Q5JR59 1369 aa15.73■□□□□ 0.11
DDR1-232ENST00000418800 BRPF3Q9ULD4 1205 aa15.72■□□□□ 0.11
DDR1-232ENST00000418800 ERICH6BQ5W0A0 696 aa15.72■□□□□ 0.11
DDR1-232ENST00000418800 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
DDR1-232ENST00000418800 RRBP1Q9P2E9 1410 aaKnown RBP15.7■□□□□ 0.1
DDR1-232ENST00000418800 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
DDR1-232ENST00000418800 WASHC2AQ641Q2 1341 aa15.69■□□□□ 0.1
DDR1-232ENST00000418800 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
DDR1-232ENST00000418800 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
DDR1-232ENST00000418800 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
DDR1-232ENST00000418800 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
DDR1-232ENST00000418800 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
DDR1-232ENST00000418800 CUX1P39880 1505 aa15.65■□□□□ 0.1
DDR1-232ENST00000418800 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
DDR1-232ENST00000418800 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
DDR1-232ENST00000418800 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
DDR1-232ENST00000418800 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
DDR1-232ENST00000418800 C11orf95C9JLR9 678 aaPredicted RBP15.62■□□□□ 0.09
DDR1-232ENST00000418800 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
DDR1-232ENST00000418800 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
DDR1-232ENST00000418800 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
DDR1-232ENST00000418800 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
DDR1-232ENST00000418800 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
DDR1-232ENST00000418800 AKNAQ7Z591 1439 aa15.58■□□□□ 0.09
DDR1-232ENST00000418800 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
DDR1-232ENST00000418800 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
DDR1-232ENST00000418800 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
DDR1-232ENST00000418800 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
DDR1-232ENST00000418800 PLIN1O60240 522 aa15.54■□□□□ 0.08
DDR1-232ENST00000418800 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
DDR1-232ENST00000418800 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
DDR1-232ENST00000418800 MPHOSPH9Q99550 1183 aa15.54■□□□□ 0.08
DDR1-232ENST00000418800 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
DDR1-232ENST00000418800 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
DDR1-232ENST00000418800 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
DDR1-232ENST00000418800 URB2Q14146 1524 aaKnown RBP15.51■□□□□ 0.07
DDR1-232ENST00000418800 LRRC9Q6ZRR7 1453 aa15.5■□□□□ 0.07
DDR1-232ENST00000418800 IGF1RP08069 1367 aa15.5■□□□□ 0.07
DDR1-232ENST00000418800 PDE4AP27815 886 aa15.5■□□□□ 0.07
DDR1-232ENST00000418800 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
DDR1-232ENST00000418800 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
DDR1-232ENST00000418800 RGS3P49796 1198 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms