RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 JPH4Q96JJ6 628 aa33■■■□□ 2.87
RPUSD3-202ENST00000418713 KIAA0586Q9BVV6 1533 aa32.98■■■□□ 2.87
RPUSD3-202ENST00000418713 CYB5RLQ6IPT4 315 aa32.94■■■□□ 2.86
RPUSD3-202ENST00000418713 SHROOM2Q13796 1616 aa32.89■■■□□ 2.86
RPUSD3-202ENST00000418713 PRXQ9BXM0 1461 aa32.89■■■□□ 2.86
RPUSD3-202ENST00000418713 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
RPUSD3-202ENST00000418713 ARAP1Q96P48 1450 aa32.83■■■□□ 2.85
RPUSD3-202ENST00000418713 FAM9AQ8IZU1 332 aaPredicted RBP32.81■■■□□ 2.84
RPUSD3-202ENST00000418713 IQGAP2Q13576 1575 aa32.75■■■□□ 2.83
RPUSD3-202ENST00000418713 CARMIL2Q6F5E8 1435 aa32.73■■■□□ 2.83
RPUSD3-202ENST00000418713 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
RPUSD3-202ENST00000418713 CTTNBP2Q8WZ74 1663 aa32.62■■■□□ 2.81
RPUSD3-202ENST00000418713 UGGT2Q9NYU1 1516 aa32.58■■■□□ 2.81
RPUSD3-202ENST00000418713 KIF21BO75037 1637 aa32.58■■■□□ 2.81
RPUSD3-202ENST00000418713 TNIKQ9UKE5 1360 aa32.56■■■□□ 2.8
RPUSD3-202ENST00000418713 GOLGA3Q08378 1498 aa32.54■■■□□ 2.8
RPUSD3-202ENST00000418713 PTPRGP23470 1445 aa32.53■■■□□ 2.8
RPUSD3-202ENST00000418713 NPM1P06748 294 aaKnown RBP eCLIP32.47■■■□□ 2.79
RPUSD3-202ENST00000418713 UBTFP17480 764 aaKnown RBP32.47■■■□□ 2.79
RPUSD3-202ENST00000418713 DISP1Q96F81 1524 aa32.46■■■□□ 2.79
RPUSD3-202ENST00000418713 TTBK1Q5TCY1 1321 aaPredicted RBP32.4■■■□□ 2.78
RPUSD3-202ENST00000418713 KIAA0556O60303 1618 aa32.4■■■□□ 2.78
RPUSD3-202ENST00000418713 TRHP20396 242 aaPredicted RBP32.31■■■□□ 2.76
RPUSD3-202ENST00000418713 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
RPUSD3-202ENST00000418713 UACAQ9BZF9 1416 aa32.28■■■□□ 2.76
RPUSD3-202ENST00000418713 RANGAP1P46060 587 aaPredicted RBP32.25■■■□□ 2.75
RPUSD3-202ENST00000418713 UHRF1BP1LA0JNW5 1464 aa32.24■■■□□ 2.75
RPUSD3-202ENST00000418713 P3H3Q8IVL6 736 aa32.23■■■□□ 2.75
RPUSD3-202ENST00000418713 ADCY10Q96PN6 1610 aa32.2■■■□□ 2.75
RPUSD3-202ENST00000418713 SAMD9Q5K651 1589 aa32.19■■■□□ 2.74
RPUSD3-202ENST00000418713 EFCAB5A4FU69 1503 aa32.19■■■□□ 2.74
RPUSD3-202ENST00000418713 ABCC2Q92887 1545 aa32.16■■■□□ 2.74
RPUSD3-202ENST00000418713 MAPKBP1O60336 1514 aa32.1■■■□□ 2.73
RPUSD3-202ENST00000418713 PLB1Q6P1J6 1458 aa32.06■■■□□ 2.72
RPUSD3-202ENST00000418713 KDM5BQ9UGL1 1544 aa32.05■■■□□ 2.72
RPUSD3-202ENST00000418713 ABCA8O94911 1581 aa32.04■■■□□ 2.72
RPUSD3-202ENST00000418713 FHOD3Q2V2M9 1422 aa32.02■■■□□ 2.72
RPUSD3-202ENST00000418713 FAM69CQ0P6D2 419 aa31.96■■■□□ 2.71
RPUSD3-202ENST00000418713 FMN1Q68DA7 1419 aa31.96■■■□□ 2.71
RPUSD3-202ENST00000418713 ABCC10Q5T3U5 1492 aa31.96■■■□□ 2.71
RPUSD3-202ENST00000418713 ARHGAP35Q9NRY4 1499 aa31.94■■■□□ 2.7
RPUSD3-202ENST00000418713 ASXL2Q76L83 1435 aa31.93■■■□□ 2.7
RPUSD3-202ENST00000418713 RAPGEF6Q8TEU7 1601 aa31.92■■■□□ 2.7
RPUSD3-202ENST00000418713 ZCCHC11Q5TAX3 1644 aaKnown RBP31.9■■■□□ 2.7
RPUSD3-202ENST00000418713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.88■■■□□ 2.69
RPUSD3-202ENST00000418713 HNRNPUL2Q1KMD3 747 aaKnown RBP31.88■■■□□ 2.69
RPUSD3-202ENST00000418713 CLIP1P30622 1438 aa31.87■■■□□ 2.69
RPUSD3-202ENST00000418713 ATP10BO94823 1461 aa31.82■■■□□ 2.68
RPUSD3-202ENST00000418713 DIP2BQ9P265 1576 aa31.81■■■□□ 2.68
RPUSD3-202ENST00000418713 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
RPUSD3-202ENST00000418713 KIF13AQ9H1H9 1805 aa31.79■■■□□ 2.68
RPUSD3-202ENST00000418713 LOC105371045A0A1W2PR82 267 aa31.79■■■□□ 2.68
RPUSD3-202ENST00000418713 ATP1B4Q9UN42 357 aaPredicted RBP31.79■■■□□ 2.68
RPUSD3-202ENST00000418713 ARID3CA6NKF2 412 aa31.78■■■□□ 2.68
RPUSD3-202ENST00000418713 NUP153P49790 1475 aaKnown RBP31.77■■■□□ 2.68
RPUSD3-202ENST00000418713 PLEKHD1A6NEE1 506 aa31.76■■■□□ 2.67
RPUSD3-202ENST00000418713 GLI2P10070 1586 aa31.75■■■□□ 2.67
RPUSD3-202ENST00000418713 EPRSP07814 1512 aaKnown RBP31.74■■■□□ 2.67
RPUSD3-202ENST00000418713 KCNH8Q96L42 1107 aa31.73■■■□□ 2.67
RPUSD3-202ENST00000418713 CDK11AQ9UQ88 783 aaPredicted RBP31.73■■■□□ 2.67
RPUSD3-202ENST00000418713 CEP162Q5TB80 1403 aa31.7■■■□□ 2.67
RPUSD3-202ENST00000418713 HECW1Q76N89 1606 aa31.69■■■□□ 2.66
RPUSD3-202ENST00000418713 CASKIN1Q8WXD9 1431 aa31.65■■■□□ 2.66
RPUSD3-202ENST00000418713 CCDC18Q5T9S5 1454 aa31.56■■■□□ 2.64
RPUSD3-202ENST00000418713 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
RPUSD3-202ENST00000418713 CD109Q6YHK3 1445 aa31.56■■■□□ 2.64
RPUSD3-202ENST00000418713 FYCO1Q9BQS8 1478 aa31.55■■■□□ 2.64
RPUSD3-202ENST00000418713 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
RPUSD3-202ENST00000418713 MAP3K4Q9Y6R4 1608 aa31.53■■■□□ 2.64
RPUSD3-202ENST00000418713 CFAP43Q8NDM7 1665 aa31.52■■■□□ 2.64
RPUSD3-202ENST00000418713 CDK13Q14004 1512 aaKnown RBP31.5■■■□□ 2.63
RPUSD3-202ENST00000418713 PCF11O94913 1555 aaKnown RBP31.48■■■□□ 2.63
RPUSD3-202ENST00000418713 MAGI3Q5TCQ9 1506 aa31.46■■■□□ 2.63
RPUSD3-202ENST00000418713 ABCA9Q8IUA7 1624 aa31.44■■■□□ 2.62
RPUSD3-202ENST00000418713 PHLDB1Q86UU1 1377 aa31.41■■■□□ 2.62
RPUSD3-202ENST00000418713 TROQ12816 1431 aaPredicted RBP31.4■■■□□ 2.62
RPUSD3-202ENST00000418713 PPRC1Q5VV67 1664 aaKnown RBP31.37■■■□□ 2.61
RPUSD3-202ENST00000418713 VPS8Q8N3P4 1428 aa31.35■■■□□ 2.61
RPUSD3-202ENST00000418713 KDM6BO15054 1643 aa31.35■■■□□ 2.61
RPUSD3-202ENST00000418713 LRRIQ1Q96JM4 1722 aa31.32■■■□□ 2.6
RPUSD3-202ENST00000418713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.3■■■□□ 2.6
RPUSD3-202ENST00000418713 KIF14Q15058 1648 aa31.29■■■□□ 2.6
RPUSD3-202ENST00000418713 NEO1Q92859 1461 aa31.27■■■□□ 2.6
RPUSD3-202ENST00000418713 MTUS2Q5JR59 1369 aa31.26■■■□□ 2.59
RPUSD3-202ENST00000418713 APLP2Q06481 763 aa31.25■■■□□ 2.59
RPUSD3-202ENST00000418713 PLCH2O75038 1416 aa31.23■■■□□ 2.59
RPUSD3-202ENST00000418713 EFCAB2Q5VUJ9 269 aa31.22■■■□□ 2.59
RPUSD3-202ENST00000418713 CFAP74Q9C0B2 1584 aa31.19■■■□□ 2.58
RPUSD3-202ENST00000418713 ARAP3Q8WWN8 1544 aa31.19■■■□□ 2.58
RPUSD3-202ENST00000418713 TTC37Q6PGP7 1564 aa31.18■■■□□ 2.58
RPUSD3-202ENST00000418713 FANCAO15360 1455 aa31.18■■■□□ 2.58
RPUSD3-202ENST00000418713 MYO5CQ9NQX4 1742 aa31.14■■■□□ 2.58
RPUSD3-202ENST00000418713 AKNAQ7Z591 1439 aa31.14■■■□□ 2.58
RPUSD3-202ENST00000418713 MAP3K1Q13233 1512 aa31.13■■■□□ 2.57
RPUSD3-202ENST00000418713 COL17A1Q9UMD9 1497 aaPredicted RBP31.12■■■□□ 2.57
RPUSD3-202ENST00000418713 EHBP1L1Q8N3D4 1523 aa31.11■■■□□ 2.57
RPUSD3-202ENST00000418713 TIAM1Q13009 1591 aa31.08■■■□□ 2.57
RPUSD3-202ENST00000418713 ARHGAP5Q13017 1502 aa31.07■■■□□ 2.56
RPUSD3-202ENST00000418713 CCNB3Q8WWL7 1395 aa31.06■■■□□ 2.56
RPUSD3-202ENST00000418713 DENND4BO75064 1496 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms