RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 NUP160Q12769 1436 aa21.78■■□□□ 1.08
LTA-213ENST00000418386 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
LTA-213ENST00000418386 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
LTA-213ENST00000418386 FBLN2P98095 1184 aa21.72■■□□□ 1.07
LTA-213ENST00000418386 IQGAP2Q13576 1575 aa21.72■■□□□ 1.07
LTA-213ENST00000418386 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
LTA-213ENST00000418386 CLIP1P30622 1438 aa21.66■■□□□ 1.06
LTA-213ENST00000418386 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
LTA-213ENST00000418386 UGGT2Q9NYU1 1516 aa21.63■■□□□ 1.05
LTA-213ENST00000418386 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
LTA-213ENST00000418386 SAMD9Q5K651 1589 aa21.6■■□□□ 1.05
LTA-213ENST00000418386 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
LTA-213ENST00000418386 SHROOM2Q13796 1616 aa21.56■■□□□ 1.04
LTA-213ENST00000418386 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
LTA-213ENST00000418386 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
LTA-213ENST00000418386 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
LTA-213ENST00000418386 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
LTA-213ENST00000418386 JPH4Q96JJ6 628 aa21.48■■□□□ 1.03
LTA-213ENST00000418386 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
LTA-213ENST00000418386 FHOD3Q2V2M9 1422 aa21.45■■□□□ 1.02
LTA-213ENST00000418386 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
LTA-213ENST00000418386 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
LTA-213ENST00000418386 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
LTA-213ENST00000418386 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
LTA-213ENST00000418386 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
LTA-213ENST00000418386 ERCC6L2Q5T890 1561 aa21.35■■□□□ 1.01
LTA-213ENST00000418386 PCF11O94913 1555 aaKnown RBP21.32■■□□□ 1
LTA-213ENST00000418386 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
LTA-213ENST00000418386 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
LTA-213ENST00000418386 PTPRGP23470 1445 aa21.24■□□□□ 0.99
LTA-213ENST00000418386 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
LTA-213ENST00000418386 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
LTA-213ENST00000418386 ABCA8O94911 1581 aa21.22■□□□□ 0.99
LTA-213ENST00000418386 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
LTA-213ENST00000418386 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
LTA-213ENST00000418386 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
LTA-213ENST00000418386 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
LTA-213ENST00000418386 LRRIQ1Q96JM4 1722 aa21.17■□□□□ 0.98
LTA-213ENST00000418386 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
LTA-213ENST00000418386 NUP153P49790 1475 aaKnown RBP21.15■□□□□ 0.98
LTA-213ENST00000418386 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
LTA-213ENST00000418386 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
LTA-213ENST00000418386 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
LTA-213ENST00000418386 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
LTA-213ENST00000418386 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
LTA-213ENST00000418386 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
LTA-213ENST00000418386 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
LTA-213ENST00000418386 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
LTA-213ENST00000418386 UHRF1BP1LA0JNW5 1464 aa21.11■□□□□ 0.97
LTA-213ENST00000418386 APLP2Q06481 763 aa21.11■□□□□ 0.97
LTA-213ENST00000418386 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
LTA-213ENST00000418386 CDK13Q14004 1512 aaKnown RBP21.07■□□□□ 0.96
LTA-213ENST00000418386 ADCY10Q96PN6 1610 aa21.05■□□□□ 0.96
LTA-213ENST00000418386 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
LTA-213ENST00000418386 ATP10BO94823 1461 aa21.01■□□□□ 0.95
LTA-213ENST00000418386 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
LTA-213ENST00000418386 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
LTA-213ENST00000418386 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
LTA-213ENST00000418386 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
LTA-213ENST00000418386 MAGI3Q5TCQ9 1506 aa20.98■□□□□ 0.95
LTA-213ENST00000418386 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
LTA-213ENST00000418386 ARID3CA6NKF2 412 aa20.95■□□□□ 0.94
LTA-213ENST00000418386 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
LTA-213ENST00000418386 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
LTA-213ENST00000418386 TROQ12816 1431 aaPredicted RBP20.92■□□□□ 0.94
LTA-213ENST00000418386 SUPT6HQ7KZ85 1726 aaKnown RBP20.91■□□□□ 0.94
LTA-213ENST00000418386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
LTA-213ENST00000418386 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
LTA-213ENST00000418386 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
LTA-213ENST00000418386 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
LTA-213ENST00000418386 NCOA2Q15596 1464 aa20.84■□□□□ 0.93
LTA-213ENST00000418386 KIF14Q15058 1648 aa20.84■□□□□ 0.93
LTA-213ENST00000418386 WDR7Q9Y4E6 1490 aa20.8■□□□□ 0.92
LTA-213ENST00000418386 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
LTA-213ENST00000418386 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
LTA-213ENST00000418386 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
LTA-213ENST00000418386 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
LTA-213ENST00000418386 ABCC10Q5T3U5 1492 aa20.77■□□□□ 0.91
LTA-213ENST00000418386 MYOM3Q5VTT5 1437 aa20.74■□□□□ 0.91
LTA-213ENST00000418386 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
LTA-213ENST00000418386 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
LTA-213ENST00000418386 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
LTA-213ENST00000418386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
LTA-213ENST00000418386 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
LTA-213ENST00000418386 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
LTA-213ENST00000418386 FGD6Q6ZV73 1430 aa20.7■□□□□ 0.9
LTA-213ENST00000418386 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
LTA-213ENST00000418386 ABCA9Q8IUA7 1624 aa20.69■□□□□ 0.9
LTA-213ENST00000418386 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
LTA-213ENST00000418386 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
LTA-213ENST00000418386 PREX2Q70Z35 1606 aa20.67■□□□□ 0.9
LTA-213ENST00000418386 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
LTA-213ENST00000418386 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
LTA-213ENST00000418386 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
LTA-213ENST00000418386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.63■□□□□ 0.89
LTA-213ENST00000418386 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
LTA-213ENST00000418386 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
LTA-213ENST00000418386 CDC42BPBQ9Y5S2 1711 aa20.63■□□□□ 0.89
LTA-213ENST00000418386 GLI2P10070 1586 aa20.61■□□□□ 0.89
LTA-213ENST00000418386 DIP2BQ9P265 1576 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms