RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ARHGAP35Q9NRY4 1499 aa32.84■■■□□ 2.85
CASC3-203ENST00000418132 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
CASC3-203ENST00000418132 VPS8Q8N3P4 1428 aa32.78■■■□□ 2.84
CASC3-203ENST00000418132 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
CASC3-203ENST00000418132 EFCAB5A4FU69 1503 aa32.74■■■□□ 2.83
CASC3-203ENST00000418132 IQGAP2Q13576 1575 aa32.72■■■□□ 2.83
CASC3-203ENST00000418132 KIAA0586Q9BVV6 1533 aa32.69■■■□□ 2.82
CASC3-203ENST00000418132 FBLN2P98095 1184 aa32.67■■■□□ 2.82
CASC3-203ENST00000418132 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
CASC3-203ENST00000418132 NUP160Q12769 1436 aa32.66■■■□□ 2.82
CASC3-203ENST00000418132 SAMD9Q5K651 1589 aa32.65■■■□□ 2.82
CASC3-203ENST00000418132 CHD1O14646 1710 aa32.59■■■□□ 2.81
CASC3-203ENST00000418132 UGGT2Q9NYU1 1516 aa32.58■■■□□ 2.81
CASC3-203ENST00000418132 FHOD3Q2V2M9 1422 aa32.54■■■□□ 2.8
CASC3-203ENST00000418132 P3H3Q8IVL6 736 aa32.52■■■□□ 2.8
CASC3-203ENST00000418132 FMN1Q68DA7 1419 aa32.42■■■□□ 2.78
CASC3-203ENST00000418132 DISP1Q96F81 1524 aa32.41■■■□□ 2.78
CASC3-203ENST00000418132 KIAA0556O60303 1618 aa32.39■■■□□ 2.78
CASC3-203ENST00000418132 PPARGC1BQ86YN6 1023 aaKnown RBP32.39■■■□□ 2.78
CASC3-203ENST00000418132 APLP2Q06481 763 aa32.38■■■□□ 2.77
CASC3-203ENST00000418132 PCF11O94913 1555 aaKnown RBP32.37■■■□□ 2.77
CASC3-203ENST00000418132 JPH4Q96JJ6 628 aa32.36■■■□□ 2.77
CASC3-203ENST00000418132 CASKIN1Q8WXD9 1431 aa32.33■■■□□ 2.77
CASC3-203ENST00000418132 FYCO1Q9BQS8 1478 aa32.33■■■□□ 2.77
CASC3-203ENST00000418132 TRIM26Q12899 539 aaPredicted RBP32.31■■■□□ 2.76
CASC3-203ENST00000418132 MAP3K1Q13233 1512 aa32.28■■■□□ 2.76
CASC3-203ENST00000418132 CARMIL2Q6F5E8 1435 aa32.27■■■□□ 2.76
CASC3-203ENST00000418132 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
CASC3-203ENST00000418132 CLASP1Q7Z460 1538 aa32.24■■■□□ 2.75
CASC3-203ENST00000418132 TIAM1Q13009 1591 aa32.22■■■□□ 2.75
CASC3-203ENST00000418132 PCGF6Q9BYE7 350 aa32.19■■■□□ 2.74
CASC3-203ENST00000418132 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
CASC3-203ENST00000418132 PRG4Q92954 1404 aaPredicted RBP32.17■■■□□ 2.74
CASC3-203ENST00000418132 TTBK1Q5TCY1 1321 aaPredicted RBP32.16■■■□□ 2.74
CASC3-203ENST00000418132 KANK4Q5T7N3 995 aaPredicted RBP32.14■■■□□ 2.74
CASC3-203ENST00000418132 ATP1B4Q9UN42 357 aaPredicted RBP32.13■■■□□ 2.73
CASC3-203ENST00000418132 HECW1Q76N89 1606 aa32.11■■■□□ 2.73
CASC3-203ENST00000418132 LRRIQ1Q96JM4 1722 aa32.1■■■□□ 2.73
CASC3-203ENST00000418132 LRRC9Q6ZRR7 1453 aa32.06■■■□□ 2.72
CASC3-203ENST00000418132 RAPGEF6Q8TEU7 1601 aa32.05■■■□□ 2.72
CASC3-203ENST00000418132 CCDC18Q5T9S5 1454 aa32.03■■■□□ 2.72
CASC3-203ENST00000418132 EPRSP07814 1512 aaKnown RBP31.99■■■□□ 2.71
CASC3-203ENST00000418132 ERCC6L2Q5T890 1561 aa31.99■■■□□ 2.71
CASC3-203ENST00000418132 OSCARQ8IYS5 282 aa31.98■■■□□ 2.71
CASC3-203ENST00000418132 PLB1Q6P1J6 1458 aa31.98■■■□□ 2.71
CASC3-203ENST00000418132 NUP153P49790 1475 aaKnown RBP31.96■■■□□ 2.71
CASC3-203ENST00000418132 PTPRGP23470 1445 aa31.95■■■□□ 2.71
CASC3-203ENST00000418132 ABCA8O94911 1581 aa31.95■■■□□ 2.7
CASC3-203ENST00000418132 CDK13Q14004 1512 aaKnown RBP31.9■■■□□ 2.7
CASC3-203ENST00000418132 MTUS2Q5JR59 1369 aa31.86■■■□□ 2.69
CASC3-203ENST00000418132 EHBP1L1Q8N3D4 1523 aa31.84■■■□□ 2.69
CASC3-203ENST00000418132 MAGI3Q5TCQ9 1506 aa31.83■■■□□ 2.69
CASC3-203ENST00000418132 UACAQ9BZF9 1416 aa31.79■■■□□ 2.68
CASC3-203ENST00000418132 ARID3CA6NKF2 412 aa31.78■■■□□ 2.68
CASC3-203ENST00000418132 RRBP1Q9P2E9 1410 aaKnown RBP31.77■■■□□ 2.68
CASC3-203ENST00000418132 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
CASC3-203ENST00000418132 PHLDB1Q86UU1 1377 aa31.74■■■□□ 2.67
CASC3-203ENST00000418132 ATP10BO94823 1461 aa31.72■■■□□ 2.67
CASC3-203ENST00000418132 ABCC2Q92887 1545 aa31.71■■■□□ 2.67
CASC3-203ENST00000418132 CDK11AQ9UQ88 783 aaPredicted RBP31.7■■■□□ 2.67
CASC3-203ENST00000418132 NCOA2Q15596 1464 aa31.7■■■□□ 2.66
CASC3-203ENST00000418132 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
CASC3-203ENST00000418132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
CASC3-203ENST00000418132 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
CASC3-203ENST00000418132 CCNB3Q8WWL7 1395 aa31.66■■■□□ 2.66
CASC3-203ENST00000418132 UHRF1BP1LA0JNW5 1464 aa31.66■■■□□ 2.66
CASC3-203ENST00000418132 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
CASC3-203ENST00000418132 MYOM3Q5VTT5 1437 aa31.57■■■□□ 2.64
CASC3-203ENST00000418132 ADCY10Q96PN6 1610 aa31.56■■■□□ 2.64
CASC3-203ENST00000418132 FGD6Q6ZV73 1430 aa31.55■■■□□ 2.64
CASC3-203ENST00000418132 PLEKHD1A6NEE1 506 aa31.54■■■□□ 2.64
CASC3-203ENST00000418132 KDM5BQ9UGL1 1544 aa31.53■■■□□ 2.64
CASC3-203ENST00000418132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.51■■■□□ 2.63
CASC3-203ENST00000418132 ZCCHC11Q5TAX3 1644 aaKnown RBP31.49■■■□□ 2.63
CASC3-203ENST00000418132 KIF14Q15058 1648 aa31.48■■■□□ 2.63
CASC3-203ENST00000418132 HRCP23327 699 aa31.44■■■□□ 2.62
CASC3-203ENST00000418132 MIA2Q96PC5 1412 aa31.43■■■□□ 2.62
CASC3-203ENST00000418132 FAM50AQ14320 339 aaKnown RBP31.41■■■□□ 2.62
CASC3-203ENST00000418132 PTPN23Q9H3S7 1636 aa31.4■■■□□ 2.62
CASC3-203ENST00000418132 ABCC10Q5T3U5 1492 aa31.38■■■□□ 2.61
CASC3-203ENST00000418132 TCOF1Q13428 1488 aaKnown RBP31.38■■■□□ 2.61
CASC3-203ENST00000418132 ITSN2Q9NZM3 1697 aa31.36■■■□□ 2.61
CASC3-203ENST00000418132 GPATCH8Q9UKJ3 1502 aaKnown RBP31.34■■■□□ 2.61
CASC3-203ENST00000418132 RIMBP3CA6NJZ7 1639 aa31.33■■■□□ 2.61
CASC3-203ENST00000418132 RIMBP3BA6NNM3 1639 aa31.33■■■□□ 2.61
CASC3-203ENST00000418132 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
CASC3-203ENST00000418132 ITGAEP38570 1179 aa31.28■■■□□ 2.6
CASC3-203ENST00000418132 CDC42BPAQ5VT25 1732 aa31.28■■■□□ 2.6
CASC3-203ENST00000418132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.24■■■□□ 2.59
CASC3-203ENST00000418132 CFDP1Q9UEE9 299 aaPredicted RBP31.23■■■□□ 2.59
CASC3-203ENST00000418132 WDR7Q9Y4E6 1490 aa31.21■■■□□ 2.59
CASC3-203ENST00000418132 TTC37Q6PGP7 1564 aa31.21■■■□□ 2.59
CASC3-203ENST00000418132 PREX2Q70Z35 1606 aa31.18■■■□□ 2.58
CASC3-203ENST00000418132 NPM1P06748 294 aaKnown RBP eCLIP31.18■■■□□ 2.58
CASC3-203ENST00000418132 PTPRKQ15262 1439 aa31.17■■■□□ 2.58
CASC3-203ENST00000418132 ASXL2Q76L83 1435 aa31.16■■■□□ 2.58
CASC3-203ENST00000418132 KCNH8Q96L42 1107 aa31.16■■■□□ 2.58
CASC3-203ENST00000418132 CAMSAP2Q08AD1 1489 aa31.16■■■□□ 2.58
CASC3-203ENST00000418132 ZNF644Q9H582 1327 aaPredicted RBP31.15■■■□□ 2.58
CASC3-203ENST00000418132 CDC42BPBQ9Y5S2 1711 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms