RNA–Protein interactions for RNA: ENST00000417171.5

PDZK1-202, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZK1, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-202ENST00000417171 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
PDZK1-202ENST00000417171 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
PDZK1-202ENST00000417171 ANP32CO43423 234 aa12.17□□□□□ -0.46
PDZK1-202ENST00000417171 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
PDZK1-202ENST00000417171 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
PDZK1-202ENST00000417171 WASHC2CQ9Y4E1 1318 aa12.15□□□□□ -0.46
PDZK1-202ENST00000417171 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
PDZK1-202ENST00000417171 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
PDZK1-202ENST00000417171 PKNOX2Q96KN3 472 aa12.14□□□□□ -0.47
PDZK1-202ENST00000417171 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
PDZK1-202ENST00000417171 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
PDZK1-202ENST00000417171 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
PDZK1-202ENST00000417171 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
PDZK1-202ENST00000417171 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
PDZK1-202ENST00000417171 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
PDZK1-202ENST00000417171 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
PDZK1-202ENST00000417171 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
PDZK1-202ENST00000417171 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
PDZK1-202ENST00000417171 FOXD1Q16676 465 aa12.1□□□□□ -0.47
PDZK1-202ENST00000417171 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
PDZK1-202ENST00000417171 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
PDZK1-202ENST00000417171 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDZK1-202ENST00000417171 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
PDZK1-202ENST00000417171 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
PDZK1-202ENST00000417171 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDZK1-202ENST00000417171 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
PDZK1-202ENST00000417171 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.48
PDZK1-202ENST00000417171 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
PDZK1-202ENST00000417171 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
PDZK1-202ENST00000417171 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
PDZK1-202ENST00000417171 PEG3Q9GZU2 1588 aa11.99□□□□□ -0.49
PDZK1-202ENST00000417171 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
PDZK1-202ENST00000417171 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
PDZK1-202ENST00000417171 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
PDZK1-202ENST00000417171 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
PDZK1-202ENST00000417171 NEFMP07197 916 aa11.96□□□□□ -0.49
PDZK1-202ENST00000417171 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
PDZK1-202ENST00000417171 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
PDZK1-202ENST00000417171 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
PDZK1-202ENST00000417171 BRPF3Q9ULD4 1205 aa11.93□□□□□ -0.5
PDZK1-202ENST00000417171 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
PDZK1-202ENST00000417171 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
PDZK1-202ENST00000417171 GSE1Q14687 1217 aa11.91□□□□□ -0.5
PDZK1-202ENST00000417171 RNF123Q5XPI4 1314 aa11.9□□□□□ -0.5
PDZK1-202ENST00000417171 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
PDZK1-202ENST00000417171 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
PDZK1-202ENST00000417171 FHAD1B1AJZ9 1412 aa11.88□□□□□ -0.51
PDZK1-202ENST00000417171 SMG6Q86US8 1419 aaKnown RBP11.87□□□□□ -0.51
PDZK1-202ENST00000417171 SIN3AQ96ST3 1273 aa11.87□□□□□ -0.51
PDZK1-202ENST00000417171 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
PDZK1-202ENST00000417171 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
PDZK1-202ENST00000417171 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
PDZK1-202ENST00000417171 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
PDZK1-202ENST00000417171 HIRIP3Q9BW71 556 aaPredicted RBP11.84□□□□□ -0.51
PDZK1-202ENST00000417171 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
PDZK1-202ENST00000417171 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
PDZK1-202ENST00000417171 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
PDZK1-202ENST00000417171 PRXQ9BXM0 1461 aa11.81□□□□□ -0.52
PDZK1-202ENST00000417171 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
PDZK1-202ENST00000417171 MS4A1P11836 297 aa11.8□□□□□ -0.52
PDZK1-202ENST00000417171 DDRGK1Q96HY6 314 aa11.8□□□□□ -0.52
PDZK1-202ENST00000417171 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
PDZK1-202ENST00000417171 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
PDZK1-202ENST00000417171 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
PDZK1-202ENST00000417171 TIAM1Q13009 1591 aa11.78□□□□□ -0.52
PDZK1-202ENST00000417171 AKNAQ7Z591 1439 aa11.77□□□□□ -0.52
PDZK1-202ENST00000417171 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.53
PDZK1-202ENST00000417171 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
PDZK1-202ENST00000417171 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
PDZK1-202ENST00000417171 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
PDZK1-202ENST00000417171 RRP9O43818 475 aaKnown RBP11.76□□□□□ -0.53
PDZK1-202ENST00000417171 PDE4AP27815 886 aa11.76□□□□□ -0.53
PDZK1-202ENST00000417171 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
PDZK1-202ENST00000417171 PRKRIP1Q9H875 184 aaPredicted RBP11.74□□□□□ -0.53
PDZK1-202ENST00000417171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
PDZK1-202ENST00000417171 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
PDZK1-202ENST00000417171 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
PDZK1-202ENST00000417171 ABCA5Q8WWZ7 1642 aa11.73□□□□□ -0.53
PDZK1-202ENST00000417171 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
PDZK1-202ENST00000417171 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
PDZK1-202ENST00000417171 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
PDZK1-202ENST00000417171 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.54
PDZK1-202ENST00000417171 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.54
PDZK1-202ENST00000417171 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
PDZK1-202ENST00000417171 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
PDZK1-202ENST00000417171 HSP90AA2PQ14568 343 aaPredicted RBP11.7□□□□□ -0.54
PDZK1-202ENST00000417171 DCAF11Q8TEB1 546 aa11.7□□□□□ -0.54
PDZK1-202ENST00000417171 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
PDZK1-202ENST00000417171 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
PDZK1-202ENST00000417171 CFAP43Q8NDM7 1665 aa11.69□□□□□ -0.54
PDZK1-202ENST00000417171 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
PDZK1-202ENST00000417171 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
PDZK1-202ENST00000417171 HSPA5P11021 654 aaKnown RBP11.66□□□□□ -0.54
PDZK1-202ENST00000417171 RRAGDQ9NQL2 400 aaPredicted RBP11.66□□□□□ -0.54
PDZK1-202ENST00000417171 CCDC7Q96M83 1385 aa11.65□□□□□ -0.54
PDZK1-202ENST00000417171 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
PDZK1-202ENST00000417171 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
PDZK1-202ENST00000417171 CCDC18Q5T9S5 1454 aa11.64□□□□□ -0.55
PDZK1-202ENST00000417171 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZK1-202ENST00000417171 L1TD1Q5T7N2 865 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms