RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
FNDC3B-203ENST00000416957 SOGA1O94964 1423 aa12.68□□□□□ -0.38
FNDC3B-203ENST00000416957 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
FNDC3B-203ENST00000416957 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
FNDC3B-203ENST00000416957 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
FNDC3B-203ENST00000416957 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
FNDC3B-203ENST00000416957 CUL7Q14999 1698 aa12.6□□□□□ -0.39
FNDC3B-203ENST00000416957 EEA1Q15075 1411 aa12.6□□□□□ -0.39
FNDC3B-203ENST00000416957 KIF27Q86VH2 1401 aa12.58□□□□□ -0.4
FNDC3B-203ENST00000416957 GRIN2BQ13224 1484 aa12.58□□□□□ -0.4
FNDC3B-203ENST00000416957 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
FNDC3B-203ENST00000416957 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
FNDC3B-203ENST00000416957 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
FNDC3B-203ENST00000416957 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
FNDC3B-203ENST00000416957 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
FNDC3B-203ENST00000416957 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
FNDC3B-203ENST00000416957 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
FNDC3B-203ENST00000416957 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
FNDC3B-203ENST00000416957 ADAMTS12P58397 1594 aa12.55□□□□□ -0.4
FNDC3B-203ENST00000416957 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
FNDC3B-203ENST00000416957 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
FNDC3B-203ENST00000416957 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
FNDC3B-203ENST00000416957 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.413e-7■■■■□ 22.4
FNDC3B-203ENST00000416957 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 SYNJ2O15056 1496 aa12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 CHD1O14646 1710 aa12.48□□□□□ -0.41
FNDC3B-203ENST00000416957 KIF21BO75037 1637 aa12.47□□□□□ -0.41
FNDC3B-203ENST00000416957 FGD1P98174 961 aa12.47□□□□□ -0.41
FNDC3B-203ENST00000416957 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.41
FNDC3B-203ENST00000416957 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
FNDC3B-203ENST00000416957 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
FNDC3B-203ENST00000416957 DHX37Q8IY37 1157 aaKnown RBP12.43□□□□□ -0.42
FNDC3B-203ENST00000416957 IGF1RP08069 1367 aa12.43□□□□□ -0.42
FNDC3B-203ENST00000416957 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
FNDC3B-203ENST00000416957 KCNA4P22459 653 aa12.41□□□□□ -0.42
FNDC3B-203ENST00000416957 GRIN2AQ12879 1464 aa12.41□□□□□ -0.42
FNDC3B-203ENST00000416957 A0A0U1RQG5 324 aaPredicted RBP12.41□□□□□ -0.42
FNDC3B-203ENST00000416957 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
FNDC3B-203ENST00000416957 RAPGEF2Q9Y4G8 1499 aa12.39□□□□□ -0.43
FNDC3B-203ENST00000416957 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
FNDC3B-203ENST00000416957 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
FNDC3B-203ENST00000416957 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
FNDC3B-203ENST00000416957 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
FNDC3B-203ENST00000416957 NUP160Q12769 1436 aa12.37□□□□□ -0.43
FNDC3B-203ENST00000416957 CARMIL1Q5VZK9 1371 aa12.37□□□□□ -0.43
FNDC3B-203ENST00000416957 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
FNDC3B-203ENST00000416957 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
FNDC3B-203ENST00000416957 SHROOM2Q13796 1616 aa12.34□□□□□ -0.43
FNDC3B-203ENST00000416957 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
FNDC3B-203ENST00000416957 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
FNDC3B-203ENST00000416957 KIAA0586Q9BVV6 1533 aa12.3□□□□□ -0.44
FNDC3B-203ENST00000416957 IQGAP2Q13576 1575 aa12.29□□□□□ -0.44
FNDC3B-203ENST00000416957 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
FNDC3B-203ENST00000416957 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
FNDC3B-203ENST00000416957 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.44
FNDC3B-203ENST00000416957 AAMPQ13685 434 aa12.26□□□□□ -0.45
FNDC3B-203ENST00000416957 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-203ENST00000416957 UGGT2Q9NYU1 1516 aa12.26□□□□□ -0.45
FNDC3B-203ENST00000416957 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
FNDC3B-203ENST00000416957 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
FNDC3B-203ENST00000416957 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
FNDC3B-203ENST00000416957 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
FNDC3B-203ENST00000416957 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
FNDC3B-203ENST00000416957 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.46
FNDC3B-203ENST00000416957 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
FNDC3B-203ENST00000416957 RBM10P98175 930 aaKnown RBP12.19□□□□□ -0.46
FNDC3B-203ENST00000416957 KIAA0556O60303 1618 aa12.18□□□□□ -0.46
FNDC3B-203ENST00000416957 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
FNDC3B-203ENST00000416957 FBLN2P98095 1184 aa12.17□□□□□ -0.46
FNDC3B-203ENST00000416957 BCANQ96GW7 911 aa12.17□□□□□ -0.46
FNDC3B-203ENST00000416957 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
FNDC3B-203ENST00000416957 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.47
FNDC3B-203ENST00000416957 FBXO3Q9UK99 471 aa12.15□□□□□ -0.47
FNDC3B-203ENST00000416957 ZMYND15Q9H091 742 aa12.14□□□□□ -0.47
FNDC3B-203ENST00000416957 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
FNDC3B-203ENST00000416957 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
FNDC3B-203ENST00000416957 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
FNDC3B-203ENST00000416957 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
FNDC3B-203ENST00000416957 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
FNDC3B-203ENST00000416957 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
FNDC3B-203ENST00000416957 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
FNDC3B-203ENST00000416957 PRG4Q92954 1404 aaPredicted RBP12.1□□□□□ -0.47
FNDC3B-203ENST00000416957 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
FNDC3B-203ENST00000416957 CDK11BP21127 795 aaKnown RBP12.09□□□□□ -0.47
FNDC3B-203ENST00000416957 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
FNDC3B-203ENST00000416957 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
FNDC3B-203ENST00000416957 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
FNDC3B-203ENST00000416957 NAP1L5Q96NT1 182 aaPredicted RBP12.07□□□□□ -0.48
FNDC3B-203ENST00000416957 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
FNDC3B-203ENST00000416957 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
FNDC3B-203ENST00000416957 ARHGAP35Q9NRY4 1499 aa12.06□□□□□ -0.48
FNDC3B-203ENST00000416957 UHRF1BP1LA0JNW5 1464 aa12.05□□□□□ -0.48
FNDC3B-203ENST00000416957 ZNF326Q5BKZ1 582 aaKnown RBP12.05□□□□□ -0.48
FNDC3B-203ENST00000416957 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
FNDC3B-203ENST00000416957 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
FNDC3B-203ENST00000416957 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
FNDC3B-203ENST00000416957 ABCA8O94911 1581 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms