RNA–Protein interactions for RNA: ENST00000416826.6

VLDLR-AS1-201, VLDLR antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VLDLR-AS1, Length 3,167 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-AS1-201ENST00000416826 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
VLDLR-AS1-201ENST00000416826 CC2D2AQ9P2K1 1620 aa11.9□□□□□ -0.5
VLDLR-AS1-201ENST00000416826 FOXD1Q16676 465 aa11.89□□□□□ -0.51
VLDLR-AS1-201ENST00000416826 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
VLDLR-AS1-201ENST00000416826 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
VLDLR-AS1-201ENST00000416826 DHX57Q6P158 1386 aaKnown RBP11.85□□□□□ -0.51
VLDLR-AS1-201ENST00000416826 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 ARXQ96QS3 562 aa11.79□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 CUX2O14529 1486 aa11.77□□□□□ -0.52
VLDLR-AS1-201ENST00000416826 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 WDR97A6NE52 1622 aa11.75□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 RRBP1Q9P2E9 1410 aaKnown RBP11.75□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
VLDLR-AS1-201ENST00000416826 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 LAMC3Q9Y6N6 1575 aa11.7□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 ITGAEP38570 1179 aa11.69□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 CUX1P39880 1505 aa11.65□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
VLDLR-AS1-201ENST00000416826 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 KCNH8Q96L42 1107 aa11.63□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 RAB3GAP2Q9H2M9 1393 aa11.63□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 FBLN2P98095 1184 aa11.63□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 THOC2Q8NI27 1593 aaKnown RBP11.61□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
VLDLR-AS1-201ENST00000416826 MAPKBP1O60336 1514 aa11.58□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 CFTRP13569 1480 aa11.57□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 IGF1RP08069 1367 aa11.57□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 SIN3AQ96ST3 1273 aa11.56□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 MAP3K1Q13233 1512 aa11.54□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 FAM50AQ14320 339 aaKnown RBP11.53□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 TIAM1Q13009 1591 aa11.53□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 PIAS4Q8N2W9 510 aaPredicted RBP11.53□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 LRRC9Q6ZRR7 1453 aa11.52□□□□□ -0.56
VLDLR-AS1-201ENST00000416826 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 SALL2Q9Y467 1007 aaPredicted RBP11.5□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 WDR62O43379 1518 aa11.47□□□□□ -0.57
VLDLR-AS1-201ENST00000416826 CCER2I3L3R5 266 aa11.46□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 ANP32CO43423 234 aa11.45□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 NEFLP07196 543 aa11.43□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.4□□□□□ -0.58
VLDLR-AS1-201ENST00000416826 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 CFAP43Q8NDM7 1665 aa11.38□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 PODXL2Q9NZ53 605 aa11.37□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 CASKIN1Q8WXD9 1431 aa11.36□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 FGD6Q6ZV73 1430 aa11.34□□□□□ -0.59
VLDLR-AS1-201ENST00000416826 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 EFCAB5A4FU69 1503 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 MTUS2Q5JR59 1369 aa11.3□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 ERICH6BQ5W0A0 696 aa11.3□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 NAIPQ13075 1403 aa11.28□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 KIF21AQ7Z4S6 1674 aa11.27□□□□□ -0.6
VLDLR-AS1-201ENST00000416826 MSH5O43196 834 aa11.26□□□□□ -0.61
VLDLR-AS1-201ENST00000416826 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
VLDLR-AS1-201ENST00000416826 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms